mRNA_M-pyrifera_M_contig119495.4028.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Match: A0A7V2Y3Q6_9BACT (Dna2/Cas4 domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y3Q6_9BACT) HSP 1 Score: 127 bits (320), Expect = 7.670e-31 Identity = 68/180 (37.78%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 1 PSHRLVLSRRDQFLASTQTVGVLGSPFKTFDQLASEVLEREGECAETLSDFQRTLLIQDVVSQLRDADDLGPLDDACATPGFAAHALRIITQLKQAGIDHERFAEIAGKRERGSGFDPIISRLYAGYQEAVIATHVYDRVGVIWKAETLARNGAPRALSGIDVLLLDAFDDFTPSELRLI 540
P+ + R ++ L G G P T D + +L EG L D +R +L+ V+++L L L A T GFA H LR+ITQLKQA I+ FAE +R S D +++ +Y YQ ++ YD G+ W+A +AR G P L +++LLLD FDDFTPSE RL+
Sbjct: 35 PTRQFASRRLERLLIEGGLSGAWGRPVSTMDDFVAALLHAEGRRPIRLGDLERRILLDRVIARLEAGGALEVLGPAARTNGFATHVLRMITQLKQAAIEPAVFAERVSRRIHPSPLDGVVASVYTEYQRTLLDMGAYDLPGLFWEANLIARAGRPAILEDVEMLLLDGFDDFTPSEFRLL 214
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Match: A0A7Y5C7Y5_9BACT (PD-(D/E)XK nuclease family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C7Y5_9BACT) HSP 1 Score: 119 bits (299), Expect = 5.060e-28 Identity = 64/180 (35.56%), Postives = 89/180 (49.44%), Query Frame = 1
Query: 1 PSHRLVLSRRDQFLASTQTVGVLGSPFKTFDQLASEVLEREGECAETLSDFQRTLLIQDVVSQLRDADDLGPLDDACATPGFAAHALRIITQLKQAGIDHERFAEIAGKRERGSGFDPIISRLYAGYQEAVIATHVYDRVGVIWKAETLARNGAPRALSGIDVLLLDAFDDFTPSELRLI 540
P+ R + + S G G+ +F+ +L G + + +R +L+ V+ +L L L DA +PGFA H LR I +LKQA ID F + R R S DPI++ +Y YQ + + YDRVGV W+A L G P D +L D FDDFTPSE R+I
Sbjct: 35 PTRHEANERAARIIQSHALPGGWGASVVSFEDFVLALLREAGIYPHEMDEVERRMLVSSVLDRLHANGALNELGDAARSPGFANHVLRAIAKLKQAAIDPATFRQFVAARSRTSWIDPIVASIYEAYQSTLHQSDAYDRVGVYWRAHVLLCEGKPSLFDRADCVLFDGFDDFTPSEFRVI 214
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Match: A0A847GAE7_9BACT (PDDEXK_1 domain-containing protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GAE7_9BACT) HSP 1 Score: 106 bits (265), Expect = 1.850e-23 Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 1
Query: 1 PSHRLVLSRRDQFLASTQTVGVLGSPFKTFDQLASEVLEREGECAETLSDFQRTLLIQDVVSQLRDADDLGPLDDACATPGFAAHALRIITQLKQAGIDHERFAE-IAGKRERGSGFDPIISRLYAGYQEAVIATHVYDRVGVIWKAETLARNGAPRALSGIDVLLLDAFDDFTPSELRLI 540
P+ R + L G+P F+ + +L G +S +RTLL++D +++L+ L L A PG H L +ITQLKQ ++ E+F E + G+++ G +D +++ +Y YQEA+I ++D G+ W A G P+AL ++++ D FDDFTPS+LRL+
Sbjct: 35 PNRASATRRMESLLLEGGLPPCFGAPVAEFNDFVAGLLSTAGVSVRLVSGLERTLLMEDCLARLQAEGRLAGLAAAPDAPGLVRHLLEVITQLKQGAVEPEQFRERVLGQKQPGL-WDLMVADVYTAYQEALIGGGLHDVPGLYWLAHEQCAAGRPKALETLELMAFDGFDDFTPSQLRLM 214
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Match: A0A1V6D047_9BACT (DNA helicase n=1 Tax=Planctomycetes bacterium ADurb.Bin126 TaxID=1852903 RepID=A0A1V6D047_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 1.270e-10 Identity = 55/185 (29.73%), Postives = 80/185 (43.24%), Query Frame = 1
Query: 1 PSHRLVLSRRDQFLASTQTVGVLGSPFKTFDQLASEVLEREGECAETLSDFQRTLLIQDVVSQLRDADDLGPLDDACATPGFAAHALRIITQLKQAGIDHERFAEIAGKRERGSGFDPIISRLYAGYQEAVIATHVYDRVGVIWKAETLAR-----NGAPRALSGIDVLLLDAFDDFTPSELRLI 540
P+ V R + L + V+ TF LA VL G + S F LL++ +V +L A L L TPG R I +LK+A D G R RG D + +Y YQ + A +++D G W A R + P AL + +L +D F DFTP++L ++
Sbjct: 32 PNSAAVNDLRRRLLEQSPAGVVMNPQVTTFAGLAQRVLRAAGATSRPASAFHLHLLLRGIVGELATAGKLPALRAVADTPGVIDALERAIGELKRAAFDTPDLRRALGAR-RGRTGD--LLEVYERYQTQLQARNLHDTEGEAWLARDELRRCIEASQPPPALQNVQLLAVDGFTDFTPTQLEML 213
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Match: A0A1J5AB68_9CHLR (DNA helicase n=1 Tax=Anaerolineae bacterium CG2_30_64_16 TaxID=1805005 RepID=A0A1J5AB68_9CHLR) HSP 1 Score: 62.8 bits (151), Expect = 3.110e-8 Identity = 55/172 (31.98%), Postives = 83/172 (48.26%), Query Frame = 1
Query: 61 GVLGSPFKTFDQLASEVL--------EREGECAETLSDFQ---RTLLIQDVVSQLRDADDLGPLDDACATPGFAAHALRIITQLKQAGIDHERFAEI-AGKRERGSGFDPIISRLYAGYQEAVIATHVYDRVGVIWKAETLARNGAPRALSGIDVLLLDAFDDFTPSELRLI 540
G LG +TF L ++VL GE + L+ R LIQ + +L A +L AC PGFA + +LK+A + + + AG+ R S ++RLYA YQ ++ T D G W A +A P LS + +L +D+FD+F P++LRL+
Sbjct: 53 GALGVVVQTFYGLYADVLALAAGAGARGPGESDQGLARLLPAVRHRLIQRLAERLSAAGELPYYAPACRAPGFARMLGDLFGELKRARVFPDELTPVLAGREPRLSE----LARLYAAYQAWLLDTGWVDADGQGWLA-AIALEEHPELLSDLALLAVDSFDEFNPTQLRLL 219
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Match: A0A2M8P026_9CHLR (UvrD-like helicase ATP-binding domain-containing protein n=1 Tax=Phototrophicales bacterium TaxID=2364211 RepID=A0A2M8P026_9CHLR) HSP 1 Score: 58.2 bits (139), Expect = 1.200e-6 Identity = 43/155 (27.74%), Postives = 75/155 (48.39%), Query Frame = 1
Query: 79 FKTFDQLASEVLEREGECAETLSDFQRTLLIQDVVSQLRDADDLGPLDDACATPGFAAHALRIITQLKQAGIDHERFAEIAGKRERGSGFDPIISRLYAGYQEAVIATHVYDRVGVIWKA-ETLARNGAPRALSGIDVLLLDAFDDFTPSELRLI 540
F F L +L+ GE L+ ++ L+++ V+ L T GF I +LKQ + E +A +A R +SRLY+ YQ+A+I ++ D G W A E L ++ + + +G+D+L++D FD F+ ++ L+
Sbjct: 66 FFNFSDLYQRILDMAGEPQRLLNPTEQRLILRHVIH----TTPLTVFAPVAHTNGFVHIIEDWIRELKQNRVFPEAYASVAQNRREHD-----LSRLYSAYQQALIRYNLMDDEGQGWLAVEALEQSPSLISQAGVDMLIVDGFDQFSHTQSDLL 211 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119495.4028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119495.4028.1 >prot_M-pyrifera_M_contig119495.4028.1 ID=prot_M-pyrifera_M_contig119495.4028.1|Name=mRNA_M-pyrifera_M_contig119495.4028.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp PSHRLVLSRRDQFLASTQTVGVLGSPFKTFDQLASEVLEREGECAETLSDback to top mRNA from alignment at M-pyrifera_M_contig119495:4..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119495.4028.1 ID=mRNA_M-pyrifera_M_contig119495.4028.1|Name=mRNA_M-pyrifera_M_contig119495.4028.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119495:4..543- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119495:4..543- >mRNA_M-pyrifera_M_contig119495.4028.1 ID=mRNA_M-pyrifera_M_contig119495.4028.1|Name=mRNA_M-pyrifera_M_contig119495.4028.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119495:4..543- (Macrocystis pyrifera P11B4 male)back to top |