prot_M-pyrifera_M_contig119462.4021.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119462.4021.1
Unique Nameprot_M-pyrifera_M_contig119462.4021.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: D8QMX0_SELML (Pre-mRNA-processing factor 19 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QMX0_SELML)

HSP 1 Score: 94.0 bits (232), Expect = 8.340e-20
Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 0
Query:    2 VVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQS--TALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 133
            ++TGGND  A+VF+R + + +A+L GH+K VT   F     +VLTAS+D + K+W    +   +  +T+  HSA + A+ VHP +   +F+TAS+D TWAF+++ SG     V    V    ++A  HPD L++
Sbjct:  234 ILTGGNDGNAIVFDRSSGEIVASLVGHSKKVTSVKFVARDDLVLTASADKTVKIWQGGEEGAYSCKQTLKEHSAEIRAITVHPTNR--FFVTASDDKTWAFYDLNSGTCTTQVTDAAVQDGYTAASFHPDGLIL 365          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A8H7U7D2_MORIS (Pre-mRNA-processing factor 19 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U7D2_MORIS)

HSP 1 Score: 93.2 bits (230), Expect = 1.520e-19
Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    2 VVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSG------VVLTASSDGSAKVWNPSAQSTAL-RTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 133
            V+TGGND    V++R+ +K LA L+GH K +T   F+G +       + ++AS+D S +VW    +   L   I  H + V A+ VHP  +  YF++AS D TWAFH  E+G+ L  V  P+  +  ++AH HPD +++
Sbjct:  226 VLTGGNDKHVQVYSREKEKVLANLTGHTKKITSVKFRGDTDGSEEIDIAVSASADKSVRVWGTGEKGYGLLHNIHAHKSDVNAITVHPSKD--YFVSASSDSTWAFHEYETGSTLLTVSDPETDAGYTAAHFHPDGMIL 362          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A6B2L2U6_9EUKA (Pre-mRNA-processing factor 19 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2U6_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 7.140e-19
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    2 VVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTA----------LRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHV 112
            ++TGG D TA+VF+R   KKLATL GH+K VT ++F   S ++ TAS D + +VW+PS   +A          L TI+ H+A +T + +HP     + +TAS D TWA H+I +GA L  V
Sbjct:  217 LLTGGVDTTAIVFDRNLTKKLATLQGHSKNVTCTLFHPSSELLFTASEDATVRVWSPSEPQSAEDSHQVPYKTLHTISRHTAPITQISLHPTEE--FLVTASADQTWALHDINTGATLLRV 335          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A2T7PH89_POMCA (Pre-mRNA-processing factor 19 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PH89_POMCA)

HSP 1 Score: 87.8 bits (216), Expect = 1.320e-17
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 0
Query:    1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVAS------------AISSAHLHPDSLL 132
            ++VTGGND TAVVFN+ T++ +A L GH K VT  ++     +V+TAS D S +VW   A +   + I  H A VT + +H  + G Y ++ S D  WAF +I +G  L  VR  K +             A++ A  HPD L+
Sbjct:  297 RIVTGGNDKTAVVFNKDTEQVMAILKGHTKKVTSVIYHPEEEIVITASPDTSIRVWGV-ANAQCGQMIRAHDAPVTGISLH--ATGDYLLSCSTDMYWAFSDIRTGRVLTKVRDQKWSDGWESMVLRNRVPALTCAQFHPDGLI 437          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A1Y3B3V0_EURMA (Pre-mRNA-processing factor 19 n=3 Tax=Pyroglyphidae TaxID=6952 RepID=A0A1Y3B3V0_EURMA)

HSP 1 Score: 85.9 bits (211), Expect = 5.880e-17
Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLL 132
            +++TGGNDH AV+++R +++ +  L GH K V   +F      V+TAS D   +VW+   +S  L+ I  H + VT++ +H  + G Y ++ S D  W+F +I +G  L  V       ++++A  HPD L+
Sbjct:  235 KMITGGNDHNAVIYDRNSEQIVTILKGHGKKVNNVIFHSNQSNVITASPDAQIRVWSVP-ESKTLQVIHAHESPVTSISLH--ATGDYLLSTSNDEKWSFSDINTGKVLIKVGDQTANHSLTTAKFHPDGLI 363          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A7I8W1T3_9ANNE (Pre-mRNA-processing factor 19 n=3 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W1T3_9ANNE)

HSP 1 Score: 84.3 bits (207), Expect = 2.060e-16
Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 0
Query:    1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLL 132
            +++TGGND TAVV+N++T   +ATL GH+K VT  V+     +  TAS D + +VW    +S     I  H   VT + +H  + G Y ++ S D  WAF +I +G  L  V     +  ++ A  HPD L+
Sbjct:  237 KIITGGNDKTAVVYNKETDCLVATLKGHSKKVTHVVYHPEEELAFTASPDQTIRVWGVK-ESKCAHVIRAHEMPVTGISLH--ATGDYLLSCSLDGYWAFSDIRNGRVLTRVGDKNSSVPLTCAQFHPDGLI 365          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A6P6Y8P7_DERPT (Pre-mRNA-processing factor 19 n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6Y8P7_DERPT)

HSP 1 Score: 82.8 bits (203), Expect = 7.160e-16
Identity = 42/132 (31.82%), Postives = 74/132 (56.06%), Query Frame = 0
Query:    1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLL 132
            +++TGGNDH AV+++R +++ +  L GH K V   ++      V+T+S D   +VW+   +S  L  I  H ++VT++ +H  + G Y ++ S D  W+F +I +G  L  V        +++A  HPD L+
Sbjct:  238 KMITGGNDHNAVIYDRNSEQIVTILKGHNKKVNNVIYHSNQSNVITSSPDSQIRVWSVP-ESRTLEVINAHESSVTSISLH--ATGDYLLSTSNDEKWSFSDINTGKVLIKVGDQTANHTLTTAKFHPDGLI 366          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A7S4HKD7_9EUKA (Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HKD7_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 4.140e-14
Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = 0
Query:    1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 133
            ++VTGG D +AV+F+R  KKKLATL+GH+K VTQ  F   S  + T S D + +VWN    S A ++ ++                           W FH+IE    +A      V+S +S   +HPD LL+
Sbjct:   69 KIVTGGVDGSAVLFDRAAKKKLATLTGHSKAVTQVSFHPDSTAIATGSQDKTIRVWNAEQGSNAYKSHSISXXXXXXXXXXXXXXXXXXXXXXXXXXWGFHDIERATTVATSSKDSVSSPMSCGGVHPDGLLL 201          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: M2Y6E8_GALSU (Pre-mRNA-processing factor 19 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6E8_GALSU)

HSP 1 Score: 77.4 bits (189), Expect = 5.660e-14
Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 0
Query:    6 GNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWN----PSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 133
            G   T   F   T+K L + S H  P+T  V      +++T+S D +A VW+       +  A  T+ +H   VT + +HP    SYF TASED TWAFH++E+G  L+  R+ K  + I+S  +HPD L++
Sbjct:  245 GXXXTVKFFTLDTEKTLTSFSAHKAPLTDLVVHPNENILITSSMDKTAVVWHWEDGDKPKPKAFNTVNIHEGVVTQIFLHPCL--SYFGTASEDCTWAFHDLETGDCLS--RTTKGPTGIASIAIHPDGLIL 372          
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: E4XNL8_OIKDI (Pre-mRNA-processing factor 19 n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XNL8_OIKDI)

HSP 1 Score: 73.6 bits (179), Expect = 1.250e-12
Identity = 45/131 (34.35%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSL 131
            ++VTG +++  VV++      ++   GH   V++ V+     VV +AS D + +VW  S +  A  TI  H AAVT + +HP+  GSY +++S+DH+WAF ++ESG  L   ++ +  + + S+  HPD L
Sbjct:  232 KIVTG-SENNVVVYDINAAAVVSKFDGHKGAVSKVVYHTNKDVVFSASEDSTVRVW--SLEGGAGTTIKAHKAAVTGIALHPL--GSYILSSSKDHSWAFSDVESGNILT--KATESEAKLESSDFHPDGL 355          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8QMX0_SELML8.340e-2038.06Pre-mRNA-processing factor 19 n=3 Tax=Selaginella ... [more]
A0A8H7U7D2_MORIS1.520e-1937.41Pre-mRNA-processing factor 19 n=1 Tax=Mortierella ... [more]
A0A6B2L2U6_9EUKA7.140e-1942.98Pre-mRNA-processing factor 19 n=1 Tax=Arcella inte... [more]
A0A2T7PH89_POMCA1.320e-1737.50Pre-mRNA-processing factor 19 n=2 Tax=Pomacea cana... [more]
A0A1Y3B3V0_EURMA5.880e-1733.33Pre-mRNA-processing factor 19 n=3 Tax=Pyroglyphida... [more]
A0A7I8W1T3_9ANNE2.060e-1636.36Pre-mRNA-processing factor 19 n=3 Tax=Dimorphilus ... [more]
A0A6P6Y8P7_DERPT7.160e-1631.82Pre-mRNA-processing factor 19 n=1 Tax=Dermatophago... [more]
A0A7S4HKD7_9EUKA4.140e-1434.59Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=V... [more]
M2Y6E8_GALSU5.660e-1436.36Pre-mRNA-processing factor 19 n=1 Tax=Galdieria su... [more]
E4XNL8_OIKDI1.250e-1234.35Pre-mRNA-processing factor 19 n=2 Tax=Oikopleura d... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 61..102
e-value: 0.0072
score: 25.5
coord: 18..57
e-value: 5.6E-6
score: 35.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 20..57
e-value: 3.1E-4
score: 21.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 25..66
score: 11.578
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..133
e-value: 1.2E-30
score: 108.3
NoneNo IPR availablePANTHERPTHR43995:SF1PRE-MRNA-PROCESSING FACTOR 19coord: 2..132
IPR038959Pre-mRNA-processing factor 19PANTHERPTHR43995FAMILY NOT NAMEDcoord: 2..132
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..111
score: 18.167
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119462contigM-pyrifera_M_contig119462:8..406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119462.4021.1mRNA_M-pyrifera_M_contig119462.4021.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119462 8..406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119462.4021.1 ID=prot_M-pyrifera_M_contig119462.4021.1|Name=mRNA_M-pyrifera_M_contig119462.4021.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSD
GSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAF
HNIESGAPLAHVRSPKVASAISSAHLHPDSLLM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR038959Prp19
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf