mRNA_M-pyrifera_M_contig119448.4015.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: G4Z2K2_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z2K2_PHYSP) HSP 1 Score: 197 bits (501), Expect = 8.500e-60 Identity = 101/185 (54.59%), Postives = 131/185 (70.81%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLAR-DLGDGV---YSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H+ D+ A L R++ GV ++ +T G+LEESK ALQLA+ + GDG+ +STVGVHPTRC EFE+ G D DA+ L AV E G ++GK+ A+GE GLDYDR EFCD ETQ ++F +Q LAER LP+FLHNRNT GDF ++ ++ R VVHSFTG EE +L +G
Sbjct: 14 DPVFTGVYRGKQKHESDLTAALARAKAFGVDKIIVTGGNLEESKAALQLAKSNEGDGLPQLFSTVGVHPTRCSEFEADGRDPDAYFAELLAVCEQGQKEGKVVAIGECGLDYDRLEFCDKETQLKYFEKQFQLAERTKLPLFLHNRNTDGDFYAMIAKHRSRFSNGVVHSFTGGKEEMLKLVELG 198
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: A0A2D4BEM9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEM9_PYTIN) HSP 1 Score: 195 bits (495), Expect = 7.220e-59 Identity = 103/188 (54.79%), Postives = 133/188 (70.74%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARD---LGDG--VYSTVGVHPTRCGEFESSG---DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H DD+ VLRR++ AGV ++ +TAG+L ES +A++LAR+ L DG ++STVGVHPTRC EFE + DADA+ AL A ++G +DG + A+GE GLDYDR EFC ETQ ++F +Q LAER LPMFLHNRNT GDF ++ + R VVHSFTGS EEA +L +G
Sbjct: 13 DPVFVGNYRGKQKHKDDLDIVLRRAKTAGVDKIIVTAGTLSESHEAMKLAREKSRLTDGPQLFSTVGVHPTRCREFEENENGLDADAYFSALEAACKEGMQDGTVVAIGECGLDYDRLEFCPKETQLKYFEKQFELAERTKLPMFLHNRNTDGDFYAIISKNRHRFTNGVVHSFTGSTEEAMKLVELG 200
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: A0A225VYJ8_9STRA (Deoxyribonuclease TATDN1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VYJ8_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.430e-57 Identity = 98/186 (52.69%), Postives = 132/186 (70.97%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDLGDG-----VYSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H+ A +L R++ GVA++ +T G+LEES+KALQLA+D +G ++STVGVHPTRC EFE+ G D D + + L A+ EDG ++GK+ A+GE GLDYDR EFCD ETQR++F +Q LAE+ LP+FLHNRNT GDF ++ + R VVHSFTG +E +L +G
Sbjct: 14 DPVFTGLYRGKQKHE---ATILARAKSFGVAKIVVTGGNLEESRKALQLAKD-HEGHEWPQLFSTVGVHPTRCSEFEAEGNDPDTYFQELLALCEDGQKEGKVVAIGECGLDYDRLEFCDKETQRKYFEKQFQLAEKTKLPLFLHNRNTEGDFYEMISKNRSRFSNGVVHSFTGGKDEMQKLVELG 195
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: A0A3R7G1W7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G1W7_9STRA) HSP 1 Score: 191 bits (484), Expect = 3.280e-57 Identity = 97/185 (52.43%), Postives = 131/185 (70.81%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDL-GDGV---YSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H+ D+ AVL R++ GV ++ +T G+LEES+ ALQLA+D G+ + +STVGVHPTRCGEFE G + D + L A+ E+G ++GK+ A+GE GLDYDR EFC+ ETQ ++F +Q LAER LP+FLHNRNT GDF ++ + R VVHSFTGS +E +L +G
Sbjct: 16 DPVFTGLYRGKQKHESDLTAVLTRAKNFGVQKIIVTGGNLEESRSALQLAKDHHGEALPELFSTVGVHPTRCGEFEVDGRNPDTYFAELLALCEEGQKEGKVVAIGECGLDYDRLEFCEKETQLKYFEKQFQLAERTKLPLFLHNRNTGGDFYEMIAKNRSRFSEGVVHSFTGSKDEMIKLVELG 200
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: A0A662X6J7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6J7_9STRA) HSP 1 Score: 191 bits (484), Expect = 8.320e-57 Identity = 103/194 (53.09%), Postives = 130/194 (67.01%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDLGD----GVYSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDF----------ARLVREYLPRIPGAVVHSFTGSAEEAAELTSM 537
DP+F G YRGKQRH+ D++AVL R++ GV ++ +T G+LEES+ AL+LA + D +YSTVGVHPTRC EFE+ G DA+ + L AV E G RDGK+ A+GE GLDYDR EFCD TQR++F +Q ALAE+ LPMFLHNRNT GDF +V E R VVHSFTG+ EE +L +
Sbjct: 14 DPVFTGLYRGKQRHEADLSAVLARAKSYGVEKVIVTGGNLEESRSALKLAVEYSDDALPSLYSTVGVHPTRCQEFEAKGNDANEYFAELLAVCEQGQRDGKVVAIGECGLDYDRLEFCDKPTQRKYFEKQFALAEQTRLPMFLHNRNTDGDFHGKLRAVVNSVPMVAENRQRFSNGVVHSFTGTKEEMLQLVEL 207
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: A0A1Y1YIY4_9FUNG (Putative deoxyribonuclease TATDN1 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIY4_9FUNG) HSP 1 Score: 189 bits (479), Expect = 1.810e-56 Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDLGDGVYSTVGVHPTRCGEFES---SGDADAHAEALAAV-LEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSM 537
DPMFRG+YRGK+ H+DD+ VL+R+ +AGV R+ IT GSL ESK+AL+LAR D +YSTVG HPTRC EFE S + + E L+ + L D K+ A+GE GLDYDR +FCD ETQ ++F +Q LAE LPMFLHNRNT GDFA+++RE R VVHSFTG+++EA EL +
Sbjct: 12 DPMFRGDYRGKKVHEDDLEYVLKRALDAGVERMLITGGSLSESKEALELARSR-DYLYSTVGCHPTRCSEFEDTSISASPEVYYEELSKIALND---QNKVVAIGECGLDYDRLQFCDKETQLKYFEKQFQLAETTKLPMFLHNRNTDGDFAKMIRENRGRFTQGVVHSFTGTSDEAKELLDL 190
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: W2QAJ6_PHYPN (Uncharacterized protein n=32 Tax=Phytophthora TaxID=4783 RepID=W2QAJ6_PHYPN) HSP 1 Score: 189 bits (479), Expect = 2.140e-56 Identity = 97/185 (52.43%), Postives = 129/185 (69.73%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDL-GDGV---YSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H+ D+ A+L R++ GV ++ +T G+LEES KALQLA++ G+G+ +STVGVHPTRC EFE++G D D + L AV E G ++GK+ A+GE GLDYDR EFCD TQ ++F +Q LAE LP+FLHNRNT GDF ++ + R VVHSFTG EE +L +G
Sbjct: 21 DPVFTGLYRGKQKHESDLTAILARAKTFGVDKIIVTGGNLEESHKALQLAKEKEGNGLPQLFSTVGVHPTRCSEFEANGKDPDTYFAELLAVCEQGQKEGKVVAIGECGLDYDRLEFCDKATQLKYFEKQFQLAELTKLPLFLHNRNTGGDFYDMISKNRSRFSNGVVHSFTGEKEEMLKLVELG 205
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: H3G955_PHYRM (TatD related DNase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G955_PHYRM) HSP 1 Score: 188 bits (477), Expect = 3.520e-56 Identity = 97/185 (52.43%), Postives = 126/185 (68.11%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLAR----DLGDGVYSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H+ D+ +L R++ GV ++ +T G+LEES+ ALQLA + +YSTVGVHPTRCGEFE+ G D DA+ + L + E G GK+ A+GE GLDYDR EFCD ETQ ++F +Q LAER LP+FLHNRNT GDF ++ + R VVHSFTGS EE +L +G
Sbjct: 14 DPVFTGLYRGKQKHESDLTHILARAKVVGVHKVIVTGGNLEESRTALQLANKNESEQLPQLYSTVGVHPTRCGEFEADGNDPDAYFDELLTLCEAGRAQGKVVAIGECGLDYDRLEFCDRETQLKYFEKQFELAERTRLPLFLHNRNTGGDFYEMISKNRSRFSHGVVHSFTGSKEEMLKLVELG 198
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: D0MUQ7_PHYIT (Deoxyribonuclease TATDN1-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MUQ7_PHYIT) HSP 1 Score: 188 bits (477), Expect = 4.640e-56 Identity = 97/185 (52.43%), Postives = 126/185 (68.11%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDL-GDGV---YSTVGVHPTRCGEFESSG-DADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSMG 540
DP+F G YRGKQ+H+ D+ A+L R+ GV ++ +T G+LEES KALQLA++ GD + +STVGVHPTRC EFE+ G D D + L AV E G ++GK+ A+GE GLDYDR EFCD TQ ++F +Q LAE LP+FLHNRNT GDF ++ + R VVHSFTG EE +L +G
Sbjct: 19 DPVFTGLYRGKQKHESDLTAILARAHTVGVEKIIVTGGNLEESHKALQLAKENEGDELPQLFSTVGVHPTRCSEFEADGNDPDTYFAELLAVCEQGKKEGKVVAIGECGLDYDRLEFCDKPTQLKYFEKQFQLAELTKLPLFLHNRNTGGDFYEMISKNRSRFSNGVVHSFTGEKEEMLKLVELG 203
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Match: A0A453BMC1_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BMC1_AEGTS) HSP 1 Score: 183 bits (464), Expect = 1.860e-55 Identity = 93/179 (51.96%), Postives = 125/179 (69.83%), Query Frame = 1
Query: 1 DPMFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDLGDGVYSTVGVHPTRCGEFESSGDADAHAEALAAVLEDGARDGKIAAVGEAGLDYDREEFCDAETQRRHFGRQVALAERFSLPMFLHNRNTRGDFARLVREYLPRIPGAVVHSFTGSAEEAAELTSM 537
D MF+G Y GKQ H D+ +VL R+ AGV R+ +T GSL+ES++AL++A G ++ TVGVHPTRCGEFE SGD + H +AL A+ ++G GK+ AVGE GLDYDR +FC ++ Q+++F +Q LAE LPMFLH R DF+ +V + L R PG V HSFTG+AEE +L S+
Sbjct: 17 DGMFKGIYHGKQCHSADLPSVLARAWAAGVDRIIVTGGSLKESREALEIAETDGR-LFCTVGVHPTRCGEFEESGDPEGHFQALLALAKEGIEKGKVVAVGECGLDYDRLQFCPSDIQKKYFEKQFELAEAVKLPMFLHMRAAGEDFSEIVSQNLYRFPGGVTHSFTGTAEERDKLLSI 194 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119448.4015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119448.4015.1 >prot_M-pyrifera_M_contig119448.4015.1 ID=prot_M-pyrifera_M_contig119448.4015.1|Name=mRNA_M-pyrifera_M_contig119448.4015.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp MFRGEYRGKQRHDDDMAAVLRRSREAGVARLFITAGSLEESKKALQLARDback to top mRNA from alignment at M-pyrifera_M_contig119448:4..543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119448.4015.1 ID=mRNA_M-pyrifera_M_contig119448.4015.1|Name=mRNA_M-pyrifera_M_contig119448.4015.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119448:4..543+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119448:4..543+ >mRNA_M-pyrifera_M_contig119448.4015.1 ID=mRNA_M-pyrifera_M_contig119448.4015.1|Name=mRNA_M-pyrifera_M_contig119448.4015.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig119448:4..543+ (Macrocystis pyrifera P11B4 male)back to top |