prot_M-pyrifera_M_contig119390.4001.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119390.4001.1
Unique Nameprot_M-pyrifera_M_contig119390.4001.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 5.500e-33
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYCNP 54
            VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMN+TPPVYCNP
Sbjct:  228 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVTPPVYCNP 281          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: B7FSR7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSR7_PHATC)

HSP 1 Score: 96.7 bits (239), Expect = 2.600e-22
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYCNP 54
            +IDDCSFHPCVRY RFE D+VVSFVPPDG+FELMRYR+      N +PPVYC+P
Sbjct:  222 LIDDCSFHPCVRYARFENDKVVSFVPPDGNFELMRYRIHPERARNFSPPVYCHP 275          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: A0A7S2GAE1_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAE1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.700e-21
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYC 52
            VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + N++ P+YC
Sbjct:   31 VIDDCSFHPCVRYNRFERDRVVSFVPPDGAFELMRYRV--NTKANVSAPIYC 80          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.230e-21
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRD---HL--QMNITPPVYCN 53
            +IDDCSFHPCVRYGRFE+DRVVSFVPPDG FELMRYRV     H+  + NI PP+YCN
Sbjct:  228 LIDDCSFHPCVRYGRFERDRVVSFVPPDGAFELMRYRVATGAHHILPRGNIIPPLYCN 285          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: A0A7S3P8V0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P8V0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.340e-21
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYCN 53
            +IDDCSFHPCVRY RFE+D+V+SFVPPDG+FELMRYR+      N  PP+YC+
Sbjct:   56 LIDDCSFHPCVRYARFEQDQVISFVPPDGNFELMRYRIHADQARNFCPPLYCH 108          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: I2CP32_NANGC (AP-3 complex subunit mu n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP32_NANGC)

HSP 1 Score: 92.4 bits (228), Expect = 1.010e-20
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYC 52
            VIDDCSFHPCVRY RFE+DR VSFVPPDGHFELMRYRV    +  + PP+YC
Sbjct:  228 VIDDCSFHPCVRYNRFERDRTVSFVPPDGHFELMRYRVTP--RQTLVPPIYC 277          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: W4FFE6_9STRA (MHD domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFE6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.580e-20
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMN-ITPPVYCNP 54
            VIDDCSFHPCVRY R+E++RV+SFVPPDGHFELM+YRV    Q+N + PP++C P
Sbjct:  227 VIDDCSFHPCVRYARYERERVISFVPPDGHFELMQYRV----QVNQVVPPIFCQP 277          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: A0A7S2KC76_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC76_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.840e-20
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYCNP 54
            VIDDCSFHPCVRY R+E DRV+SFVP DG+FELMRYRVR+  Q+ + PP++C P
Sbjct:  240 VIDDCSFHPCVRYNRYEHDRVISFVPADGNFELMRYRVRNGSQL-VNPPIFCTP 292          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: A0A7S4QJD2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QJD2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.130e-20
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYCNP 54
            +IDDCSFHPCVRYGR+E D+VVSFVPPDG+FELM+YRVR+      +PP+ C P
Sbjct:  253 LIDDCSFHPCVRYGRYEMDKVVSFVPPDGNFELMKYRVRNAAAKMFSPPLQCTP 306          
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Match: A0A812RSH5_SYMMI (AP3M1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RSH5_SYMMI)

HSP 1 Score: 88.6 bits (218), Expect = 3.500e-20
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPVYCNP 54
            V+DDCSFHPCVRY R++KD+VVSFVPPDG FELMRYRV       I PP +C P
Sbjct:  111 VLDDCSFHPCVRYKRYDKDKVVSFVPPDGQFELMRYRVNRPGSSPIVPPCFCQP 164          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119390.4001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNI3_ECTSI5.500e-3398.15Clathrin assembly complex, medium subunit n=1 Tax=... [more]
B7FSR7_PHATC2.600e-2272.22Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2GAE1_9STRA4.700e-2175.00Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A835YUG2_9STRA8.230e-2174.14Mu homology domain-containing protein n=1 Tax=Trib... [more]
A0A7S3P8V0_9STRA8.340e-2167.92Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
I2CP32_NANGC1.010e-2075.00AP-3 complex subunit mu n=1 Tax=Nannochloropsis ga... [more]
W4FFE6_9STRA2.580e-2069.09MHD domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S2KC76_9STRA2.840e-2070.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4QJD2_9STRA3.130e-2068.52Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A812RSH5_SYMMI3.500e-2068.52AP3M1 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 2..54
e-value: 6.9E-18
score: 65.0
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 1..54
score: 12.89
NoneNo IPR availableGENE3D2.60.40.1170coord: 2..43
e-value: 5.7E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 2..51
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119390contigM-pyrifera_M_contig119390:166..327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119390.4001.1mRNA_M-pyrifera_M_contig119390.4001.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119390 166..327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119390.4001.1 ID=prot_M-pyrifera_M_contig119390.4001.1|Name=mRNA_M-pyrifera_M_contig119390.4001.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
VIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNITPPV
YCNP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD
IPR036168AP2_Mu_C_sf