mRNA_M-pyrifera_M_contig100201.40.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100201.40.1
Unique NamemRNA_M-pyrifera_M_contig100201.40.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A5N5T004_9CRUS (COP9 signalosome complex subunit 2 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T004_9CRUS)

HSP 1 Score: 203 bits (517), Expect = 1.340e-63
Identity = 103/147 (70.07%), Postives = 126/147 (85.71%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+   YEEM+  Y++LL YIK+AVTRN+SEK INS+L++IS+S ++ELLQ FYETTLEALK AKNDRLWFKTN KLGKL + RE+F+ LS+IL+ L +SC T EG +D KKGTQLLEIYALEIQMYT+QKNNKKL
Sbjct:   69 GFKALKQMIKINFKMGNYEEMMTRYKQLLTYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYYDREDFTRLSRILKQLHQSCQTDEGEDDLKKGTQLLEIYALEIQMYTSQKNNKKL 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A6P3D2A9_IXOSC (COP9 signalosome complex subunit 2 n=18 Tax=Ixodoidea TaxID=297308 RepID=A0A6P3D2A9_IXOSC)

HSP 1 Score: 206 bits (525), Expect = 2.220e-62
Identity = 104/147 (70.75%), Postives = 128/147 (87.07%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+  +YEEM+A Y++LL YIK+AVTRN+SEK INS+L++IS+S  +ELLQ+FYETTL+ALK AKNDRLWFKTN KLGKL F R EF++L+KIL+ L +SC T +G +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   69 GFKALKQMIKINFKLSKYEEMMARYKQLLTYIKSAVTRNYSEKSINSILDYISTSKQMELLQEFYETTLDALKDAKNDRLWFKTNTKLGKLYFDRSEFNKLAKILKQLHQSCQTDDGADDLKKGTQLLEIYALEIQMYTAQKNNKKL 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A0M3J3G8_ANISI (COP9 signalosome complex subunit 2 (inferred by orthology to a C. elegans protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3J3G8_ANISI)

HSP 1 Score: 200 bits (508), Expect = 2.430e-62
Identity = 101/147 (68.71%), Postives = 124/147 (84.35%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F   EY+ ML+ YR+LL+YIKTAVT+N+SEK IN++L++IS+S  ++LLQ+FYETTL+ALK AKN+RLWFKTN KLGKL F R EF +L KI++ LR SC T EG EDQKKGTQLLE+YALEIQMYT QKNNK L
Sbjct:   56 GFKALKQMIKITFSLSEYDSMLSYYRQLLSYIKTAVTKNYSEKSINAILDYISTSKQMDLLQKFYETTLDALKDAKNERLWFKTNTKLGKLYFDRREFGKLEKIVKQLRSSCKTEEGEEDQKKGTQLLEVYALEIQMYTEQKNNKAL 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A0K2TSS2_LEPSM (COP9 signalosome complex subunit 2like [Aplysia californica] (Fragment) n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TSS2_LEPSM)

HSP 1 Score: 197 bits (502), Expect = 4.780e-62
Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+ + Y+EM+  Y+ LL YIK+AVTRN SEK INS+L++IS+S  +ELLQ FYETTLEALK AKN+RLWFKT  KLGKL F REE+S LSKIL+ L  SC T +G +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   44 GFKALKQMIKINFRLQNYDEMMRRYKALLTYIKSAVTRNHSEKSINSILDYISTSKQMELLQDFYETTLEALKDAKNERLWFKTMTKLGKLYFDREEYSRLSKILKQLHASCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKL 190
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: C3YNP1_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YNP1_BRAFL)

HSP 1 Score: 207 bits (526), Expect = 5.560e-62
Identity = 106/147 (72.11%), Postives = 127/147 (86.39%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+   YEEM+  Y++LL YIKTAVTRN+SEK INS+L++IS+S ++ELLQ FYETTLEALK AKNDRLWFKTN KLGKL + REEF++L+KIL+ L +SC T EG +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:  209 GFKALKQMIKINFKLGNYEEMMKRYKQLLTYIKTAVTRNYSEKSINSILDYISTSKNMELLQNFYETTLEALKDAKNDRLWFKTNTKLGKLYYDREEFNKLAKILKQLHQSCQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKL 355
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A3R7SSM7_PENVA (COP9 signalosome complex subunit 2 n=9 Tax=Eumalacostraca TaxID=72041 RepID=A0A3R7SSM7_PENVA)

HSP 1 Score: 205 bits (522), Expect = 6.080e-62
Identity = 105/147 (71.43%), Postives = 126/147 (85.71%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+   YEEM+  Y++LL YIK+AVTRN+SEK INS+L++IS+S ++ELLQ FYETTLEALK AKNDRLWFKTN KLGKL F RE+++ LSKIL+ L +SC T EG +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   69 GFKALKQMIKINFRLGNYEEMMTRYKQLLTYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDYTRLSKILKQLHQSCQTDEGEDDLKKGTQLLEIYALEIQMYTAQKNNKKL 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: UPI0007381E78 (COP9 signalosome complex subunit 2 isoform X1 n=2 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007381E78)

HSP 1 Score: 201 bits (510), Expect = 6.180e-62
Identity = 102/147 (69.39%), Postives = 126/147 (85.71%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+   Y+EM+A Y++LL YIK+AVTRN SEK INS+L++IS+S ++ELLQ FYETTL+ALK AKNDRLWFKTN KLGKL F R +F++L+KIL+ L +SC T +G +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   69 GFKALKQMIKINFKLNNYKEMMARYKQLLTYIKSAVTRNHSEKSINSILDYISTSKNMELLQDFYETTLDALKDAKNDRLWFKTNTKLGKLYFDRSDFNKLAKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKL 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A443QLB1_9ACAR (COP9 signalosome complex subunit 2 n=4 Tax=Ecdysozoa TaxID=1206794 RepID=A0A443QLB1_9ACAR)

HSP 1 Score: 204 bits (519), Expect = 1.710e-61
Identity = 103/147 (70.07%), Postives = 128/147 (87.07%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+  +Y EM+A Y++LL YIK+AVTRN+SEK INS+L++IS+S  +ELLQ+FYETTLEALK AKNDRLWFKTN KLGKL + REE+++L+KIL+ L +SC T +G +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   69 GFKALKQMIKINFRLGKYSEMMARYKQLLTYIKSAVTRNYSEKSINSILDYISTSKQMELLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYYDREEYTKLAKILKQLHQSCQTDDGSDDLKKGTQLLEIYALEIQMYTAQKNNKKL 215
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A8J5DAK3_9CHEL (COP9 signalosome complex subunit 2 n=3 Tax=Chelicerata TaxID=6843 RepID=A0A8J5DAK3_9CHEL)

HSP 1 Score: 204 bits (518), Expect = 2.350e-61
Identity = 104/147 (70.75%), Postives = 126/147 (85.71%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+   Y+EM+  Y++LL YIK+AVTRN+SEK INS+L++IS+S  +ELLQ FYETTL+ALK AKNDRLWFKTN KLGKL F REEF++LSKIL+ L +SC T +G +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   68 GFKALKQMIKINFKVANYQEMMTRYKQLLTYIKSAVTRNYSEKSINSILDYISTSRQMELLQDFYETTLDALKDAKNDRLWFKTNTKLGKLYFDREEFNKLSKILKQLHQSCQTEDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKL 214
[Close]
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Match: A0A3Q0JLM4_DIACI (COP9 signalosome complex subunit 2 n=2 Tax=Psylloidea TaxID=33375 RepID=A0A3Q0JLM4_DIACI)

HSP 1 Score: 204 bits (518), Expect = 2.410e-61
Identity = 103/147 (70.07%), Postives = 128/147 (87.07%), Query Frame = 1 
Query:    1 GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLEFISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSELSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL 441
            GFKALKQ++K+ F+   Y+EM++ Y++LL YIK+AVTRN+SEK INS+L++IS+S ++ELLQ FYETTLEALK AKNDRLWFKTN KLGKL F RE+F++LS+IL+ L +SC T +G +D KKGTQLLEIYALEIQMYTAQKNNKKL
Sbjct:   69 GFKALKQMIKINFKLSNYKEMMSRYKQLLLYIKSAVTRNYSEKSINSILDYISTSKNMELLQDFYETTLEALKDAKNDRLWFKTNTKLGKLYFDREDFNKLSRILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKL 215
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100201.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N5T004_9CRUS1.340e-6370.07COP9 signalosome complex subunit 2 n=1 Tax=Armadil... [more]
A0A6P3D2A9_IXOSC2.220e-6270.75COP9 signalosome complex subunit 2 n=18 Tax=Ixodoi... [more]
A0A0M3J3G8_ANISI2.430e-6268.71COP9 signalosome complex subunit 2 (inferred by or... [more]
A0A0K2TSS2_LEPSM4.780e-6270.07COP9 signalosome complex subunit 2like [Aplysia ca... [more]
C3YNP1_BRAFL5.560e-6272.11Uncharacterized protein (Fragment) n=1 Tax=Branchi... [more]
A0A3R7SSM7_PENVA6.080e-6271.43COP9 signalosome complex subunit 2 n=9 Tax=Eumalac... [more]
UPI0007381E786.180e-6269.39COP9 signalosome complex subunit 2 isoform X1 n=2 ... [more]
A0A443QLB1_9ACAR1.710e-6170.07COP9 signalosome complex subunit 2 n=4 Tax=Ecdysoz... [more]
A0A8J5DAK3_9CHEL2.350e-6170.75COP9 signalosome complex subunit 2 n=3 Tax=Chelice... [more]
A0A3Q0JLM4_DIACI2.410e-6170.07COP9 signalosome complex subunit 2 n=2 Tax=Psylloi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100201contigM-pyrifera_M_contig100201:9..681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score206.5
Seed ortholog evalue8.8e-51
Seed eggNOG ortholog7739.XP_002601989.1
Preferred nameCOPS2
KEGG koko:K12176
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000338,GO:0000715,GO:0002009,GO:0003006,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007399,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008180,GO:0008230,GO:0008231,GO:0008283,GO:0008356,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0014706,GO:0016043,GO:0016070,GO:0016333,GO:0016922,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0023052,GO:0030154,GO:0030182,GO:0030718,GO:0030727,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0035914,GO:0036099,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044798,GO:0045892,GO:0045934,GO:0046483,GO:0046983,GO:0048134,GO:0048135,GO:0048138,GO:0048140,GO:0048142,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048609,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051427,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060537,GO:0060538,GO:0061061,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein deneddylation
EggNOG OGs38GQV@33154,3BGHW@33208,3CTUD@33213,484PH@7711,COG5159@1,KOG1464@2759
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-00_003570.1
COG Functional cat.OT
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Exons3
Model size441
Cds size441
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100201.40.1prot_M-pyrifera_M_contig100201.40.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100201 9..681 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815496.7592685-CDS-M-pyrifera_M_contig100201:8..2421622815496.7592685-CDS-M-pyrifera_M_contig100201:8..242Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100201 9..242 +
1692277438.3840954-CDS-M-pyrifera_M_contig100201:8..2421692277438.3840954-CDS-M-pyrifera_M_contig100201:8..242Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100201 9..242 +
1622815496.7716925-CDS-M-pyrifera_M_contig100201:415..4901622815496.7716925-CDS-M-pyrifera_M_contig100201:415..490Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100201 416..490 +
1692277438.3983755-CDS-M-pyrifera_M_contig100201:415..4901692277438.3983755-CDS-M-pyrifera_M_contig100201:415..490Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100201 416..490 +
1622815496.7811818-CDS-M-pyrifera_M_contig100201:549..6811622815496.7811818-CDS-M-pyrifera_M_contig100201:549..681Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100201 550..681 +
1692277438.4058266-CDS-M-pyrifera_M_contig100201:549..6811692277438.4058266-CDS-M-pyrifera_M_contig100201:549..681Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100201 550..681 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100201.40.1

>prot_M-pyrifera_M_contig100201.40.1 ID=prot_M-pyrifera_M_contig100201.40.1|Name=mRNA_M-pyrifera_M_contig100201.40.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp
GFKALKQLVKLRFQRKEYEEMLAAYRRLLAYIKTAVTRNFSEKVINSLLE
FISSSSDIELLQQFYETTLEALKLAKNDRLWFKTNLKLGKLRFQREEFSE
LSKILRHLRESCLTPEGIEDQKKGTQLLEIYALEIQMYTAQKNNKKL
back to top

mRNA from alignment at M-pyrifera_M_contig100201:9..681+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100201.40.1 ID=mRNA_M-pyrifera_M_contig100201.40.1|Name=mRNA_M-pyrifera_M_contig100201.40.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=673bp|location=Sequence derived from alignment at M-pyrifera_M_contig100201:9..681+ (Macrocystis pyrifera P11B4 male)
GGCTTCAAGGCACTGAAGCAGCTGGTGAAGCTGCGGTTCCAGCGGAAGGA
GTACGAGGAGATGCTGGCGGCCTACCGCAGGCTGCTGGCCTACATCAAGA
CCGCCGTCACCCGCAACTTCAGCGAGAAGGTCATCAACAGCCTCCTCGAG
TTCATCTCCAGCTCCAGCGACATCGAGCTCCTCCAGCAGTTCTACGAAAC
CACCCTCGAGGCCCTCAAGCTCGCCAAGAACGACGTTCGCTCCTCTTCTC
ACTCTCTCACTCACAAACGCCGGATCCTCACGCTCTCTCGCACACTGTCT
CACTCACGTTCTCGATCACTGTCACATACGCACCTTTGGCACACATACCC
TCCACTCTCTCTCGCTCCTATTCACACATTCCTGGGGGAGGCTGACGAGG
TTCTCAGCGGCTGTGGTTCAAGACGAACCTGAAGCTGGGCAAGCTGCGCT
TCCAGCGGGAGGAGTTCAGTGAGCTCTCCAAGGTGCGGACGAGCCCAGAG
TTGGGAGGGGCATGCGAGGGCATGGCGCTGACCAGGGGCAGATTCTCCGG
CACCTGCGGGAGTCGTGCCTCACGCCAGAGGGAATCGAGGACCAGAAGAA
GGGCACGCAGCTCCTCGAGATCTATGCGCTCGAGATCCAGATGTACACAG
CACAGAAGAACAACAAGAAGCTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig100201:9..681+

>mRNA_M-pyrifera_M_contig100201.40.1 ID=mRNA_M-pyrifera_M_contig100201.40.1|Name=mRNA_M-pyrifera_M_contig100201.40.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig100201:9..681+ (Macrocystis pyrifera P11B4 male)
GGCTTCAAGGCACTGAAGCAGCTGGTGAAGCTGCGGTTCCAGCGGAAGGA
GTACGAGGAGATGCTGGCGGCCTACCGCAGGCTGCTGGCCTACATCAAGA
CCGCCGTCACCCGCAACTTCAGCGAGAAGGTCATCAACAGCCTCCTCGAG
TTCATCTCCAGCTCCAGCGACATCGAGCTCCTCCAGCAGTTCTACGAAAC
CACCCTCGAGGCCCTCAAGCTCGCCAAGAACGACGGCTTCAAGGCACTGA
AGCAGCTGGTGAAGCTGCGGTTCCAGCGGAAGGAGTACGAGGAGATGCTG
GCGGCCTACCGCAGGCTGCTGGCCTACATCAAGACCGCCGTCACCCGCAA
CTTCAGCGAGAAGGTCATCAACAGCCTCCTCGAGTTCATCTCCAGCTCCA
GCGACATCGAGCTCCTCCAGCAGTTCTACGAAACCACCCTCGAGGCCCTC
AAGCTCGCCAAGAACGACCGGCTGTGGTTCAAGACGAACCTGAAGCTGGG
CAAGCTGCGCTTCCAGCGGGAGGAGTTCAGTGAGCTCTCCAAGCGGCTGT
GGTTCAAGACGAACCTGAAGCTGGGCAAGCTGCGCTTCCAGCGGGAGGAG
TTCAGTGAGCTCTCCAAGATTCTCCGGCACCTGCGGGAGTCGTGCCTCAC
GCCAGAGGGAATCGAGGACCAGAAGAAGGGCACGCAGCTCCTCGAGATCT
ATGCGCTCGAGATCCAGATGTACACAGCACAGAAGAACAACAAGAAGCTC
ATTCTCCGGCACCTGCGGGAGTCGTGCCTCACGCCAGAGGGAATCGAGGA
CCAGAAGAAGGGCACGCAGCTCCTCGAGATCTATGCGCTCGAGATCCAGA
TGTACACAGCACAGAAGAACAACAAGAAGCTC
back to top