mRNA_M-pyrifera_M_contig119365.3997.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A518A5T0_9PLAN (Lipopolysaccharide heptosyltransferase 1 n=10 Tax=Gimesia TaxID=1649453 RepID=A0A518A5T0_9PLAN) HSP 1 Score: 341 bits (875), Expect = 1.240e-115 Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTGIMTAATRAPWR+GIEAAREGS TCNLT+PDTGRYVPAWLKYWRVADAFGQG L+R T+IYLS D+NWA KL+ PEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQ+VLVGTSAERELTGHIEKLL KFVPTGRVINLAGET+LKQLAAVLQQSDFVLTNDSGPMHLA
Sbjct: 104 RTGIMTAATRAPWRIGIEAAREGSRFTCNLTVPDTGRYVPAWLKYWRVADAFGQGELERKTEIYLSPGDRNWALDKLHSPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQIVLVGTSAERELTGHIEKLLHKFVPTGRVINLAGETSLKQLAAVLQQSDFVLTNDSGPMHLA 284
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A518IBW4_9PLAN (Lipopolysaccharide heptosyltransferase 1 n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IBW4_9PLAN) HSP 1 Score: 291 bits (744), Expect = 9.290e-96 Identity = 142/181 (78.45%), Postives = 155/181 (85.64%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTGIMT ATRAPWR+GIEAAREGSHL NLTIPDTGR VPA+LKYWRVADA G G +R TDI LS++D NWA+ KL E PTLAIHAGAQWITKRWPPESFAAVGAKAIR FRC +VLVGT+ ER LT HI++LL KFVPTG V+NLAGETTLKQLAAVL +SDF+LTNDSGPMHLA
Sbjct: 104 RTGIMTTATRAPWRIGIEAAREGSHLAYNLTIPDTGRLVPAYLKYWRVADALGLGETQRQTDIALSKEDMNWAKSKLTPQENRTPTLAIHAGAQWITKRWPPESFAAVGAKAIRHFRCNIVLVGTADERPLTNHIQQLLHKFVPTGNVLNLAGETTLKQLAAVLIESDFLLTNDSGPMHLA 284
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A517VY21_9PLAN (Lipopolysaccharide core heptosyltransferase RfaQ n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VY21_9PLAN) HSP 1 Score: 280 bits (715), Expect = 2.300e-91 Identity = 138/181 (76.24%), Postives = 152/181 (83.98%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTGIMTA+T APWR+GIEAAREGSHL NLTIPDTGR VPA+LKYWRVADA G G +R T + LS +D WA+ KL +P LAIHAGAQWITKRWPPESFAAVGAKAIRRFRC VVLVGT+ ER LT I++LL KFVPTGR+INLAGETTLKQLAAVL +SDF+LTNDSGPMHLA
Sbjct: 104 RTGIMTASTCAPWRIGIEAAREGSHLAYNLTIPDTGRLVPAYLKYWRVADALGFGETQRQTGLILSNEDTTWAKSKLDRKNNLVPILAIHAGAQWITKRWPPESFAAVGAKAIRRFRCNVVLVGTADERPLTSQIQQLLHKFVPTGRIINLAGETTLKQLAAVLTESDFLLTNDSGPMHLA 284
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A517V8K5_9PLAN (Lipopolysaccharide core heptosyltransferase RfaQ n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V8K5_9PLAN) HSP 1 Score: 276 bits (705), Expect = 7.740e-90 Identity = 132/181 (72.93%), Postives = 151/181 (83.43%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTG+MTAATRA WR+GIEAAREGSHL N+TIP+T R +PA+ KYW VADAFG G R T I +S++D+ WA+K L E PTLAIHAGAQWITKRWPPESFAAVGAKAIR FRC +VLVGT+ ER LT IEKLL KFVPTGRV+NLAG+TTLKQLAAVL ++D++LTNDSGPMHLA
Sbjct: 105 RTGVMTAATRARWRIGIEAAREGSHLAYNMTIPETSRSIPAYQKYWNVADAFGSGEKSRETSISISDEDKAWARKTLSAGEKSCPTLAIHAGAQWITKRWPPESFAAVGAKAIRHFRCNIVLVGTADERPLTSQIEKLLHKFVPTGRVLNLAGQTTLKQLAAVLMETDYLLTNDSGPMHLA 285
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A2E2C9X0_9PLAN (Heptosyltransferase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C9X0_9PLAN) HSP 1 Score: 265 bits (677), Expect = 2.750e-85 Identity = 127/181 (70.17%), Postives = 149/181 (82.32%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTG+MTAATRAPWR+G+E++REGSHL NLTIP+T R VPA+ KYW VADAFG R T I++S+ D+ WA+ L PTLAIHAGAQWITKRWPPESFAAVGAKAIR FRC +VLVGT+ ER LT IEKLL KFVPTGRV+NLAG+TTLKQLAA+L +++++LTNDSGPMHLA
Sbjct: 129 RTGVMTAATRAPWRIGMESSREGSHLAYNLTIPETSRTVPAYQKYWNVADAFGTEETGRDTQIFISDADKAWARDILSAGAKSCPTLAIHAGAQWITKRWPPESFAAVGAKAIRHFRCNIVLVGTTDERPLTSQIEKLLHKFVPTGRVLNLAGQTTLKQLAALLMETNYLLTNDSGPMHLA 309
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A2D6SV28_9PLAN (Heptosyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SV28_9PLAN) HSP 1 Score: 205 bits (522), Expect = 2.660e-62 Identity = 100/181 (55.25%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTG+MT ATRAP R+G+++AREG+HLTC+ TIPD+GR VPA +YWRVA+A G G+L+ T+I ++ +D+NWA ++ LAIHAGA+W TKRWP E FA V KAIR + VVL+G++AE+ L +E L+ +FVP +NL G T+LKQLAAVL ++ VLTNDSGPMH+A
Sbjct: 102 RTGLMTLATRAPLRIGLQSAREGAHLTCHHTIPDSGRLVPAHRRYWRVAEALGLGDLQAETEIPMAAEDRNWAATQM--ARVGPRILAIHAGARWQTKRWPVEKFAVVACKAIRLYGYSVVLLGSAAEQPLARQLETLINRFVPAQHALNLTGRTSLKQLAAVLSSAEAVLTNDSGPMHMA 280
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: UPI0019B9991B (Lipopolysaccharide heptosyltransferase II n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019B9991B) HSP 1 Score: 186 bits (472), Expect = 8.950e-55 Identity = 90/181 (49.72%), Postives = 125/181 (69.06%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
R+G+M AAT AP RVG+E +REG+ C+LTIP TG+ +PA+ +YWR+A+ G G+ + T ++ ++ D+ WA +L+ P+ LAIH GA+W+TKRWP E FA V KA+R++ VV++G+ E + ++ LLQ FV V+NL G+TTLKQL AVL D VLTNDSGPMHLA
Sbjct: 104 RSGLMAAATGAPLRVGLETSREGAGFACHLTIPQTGKGMPAFQRYWRIAEELGFGDRQPQTIVHTADSDRAWATSELHALSGPI--LAIHPGARWMTKRWPVEKFAVVANKAMRQYGFSVVILGSKGEMPVANELQTLLQGFVSRKTVLNLTGKTTLKQLTAVLSSVDVVLTNDSGPMHLA 282
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A2E7D003_9PLAN (Heptosyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D003_9PLAN) HSP 1 Score: 182 bits (463), Expect = 1.890e-53 Identity = 92/181 (50.83%), Postives = 123/181 (67.96%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTGIMTAAT A RVG++ AREG+HL N+TIP+TGR +PA +YWR A+A G G +R T I +S+ D NWA+ +L + L IH GA W TKRWP E +A VG K +R + VV++G+ E EL +E L +FVP+ ++NL+G+T+LKQL+ +L D + TNDSGPMHLA
Sbjct: 102 RTGIMTAATGAQVRVGLQTAREGAHLASNVTIPNTGRDIPAHQRYWRGAEALGLGESRRQTLIRISKQDSNWAEGQL--SQLKGMVLGIHPGAGWTTKRWPIEKYAVVGCKFMRMYGGSVVILGSPDEAELGEQLEALFNRFVPSKPILNLSGKTSLKQLSTMLSAVDLLATNDSGPMHLA 280
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A3B8L042_9PLAN (Heptosyltransferase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8L042_9PLAN) HSP 1 Score: 181 bits (459), Expect = 8.310e-53 Identity = 93/181 (51.38%), Postives = 123/181 (67.96%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGRVINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTG+MT +TRAP R+G+E AREG+ C+ + DTGR VPA+ +YWRVA+ GQG+L T DI + D+ WA + + +A+HAGA+W+TKRWP E FAAVGA AI +VLVG+S ER +++L+ P GR+ NLAG+T LK+LAA+L D V+TNDSGPMHLA
Sbjct: 104 RTGLMTVSTRAPVRIGLETAREGAGWACHGLLEDTGRQVPAFRRYWRVAEFLGQGHLAPTADIAVPTSDRGWADVTVR--QLGGRVVALHAGARWMTKRWPLEHFAAVGAHAIHEHGAALVLVGSSDERLEAARLKELIVGHAPAGRIENLAGQTGLKKLAALLGAVDTVVTNDSGPMHLA 282
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Match: A0A517ZSL7_9PLAN (ADP-heptose--LPS heptosyltransferase 2 n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZSL7_9PLAN) HSP 1 Score: 180 bits (456), Expect = 2.060e-52 Identity = 93/182 (51.10%), Postives = 121/182 (66.48%), Query Frame = 1
Query: 1 RTGIMTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQGNLKRTTDIYLSEDDQNWAQKKLYCPEYPLPTLAIHAGAQWITKRWPPESFAAVGAKAIRRFRCQVVLVGTSAERELTGHIEKLLQKFVPTGR-VINLAGETTLKQLAAVLQQSDFVLTNDSGPMHLA 543
RTG+M AATRAP R+G+E AREG+ L CN+TIPDTGR +PA +YWRVA+AFG G+ R + LS+ D + A + L P P +AIH GA+W+TKRWP E FA V A+ +V++G+ E L +E + T V NLAG+T+LK+LAAVLQ D V++NDSGPMHLA
Sbjct: 100 RTGVMCAATRAPIRIGLETAREGAGLACNITIPDTGRLMPAHARYWRVAEAFGVGDASRQLQLSLSDADISAAARLL--GGLPRPLIAIHPGARWVTKRWPTEKFAEVACAAMSENAAGIVVLGSGDEASLAADVESRIVAATGTANNVRNLAGQTSLKELAAVLQSVDMVVSNDSGPMHLA 279 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119365.3997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119365.3997.1 >prot_M-pyrifera_M_contig119365.3997.1 ID=prot_M-pyrifera_M_contig119365.3997.1|Name=mRNA_M-pyrifera_M_contig119365.3997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp MTAATRAPWRVGIEAAREGSHLTCNLTIPDTGRYVPAWLKYWRVADAFGQback to top mRNA from alignment at M-pyrifera_M_contig119365:3..545+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119365.3997.1 ID=mRNA_M-pyrifera_M_contig119365.3997.1|Name=mRNA_M-pyrifera_M_contig119365.3997.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig119365:3..545+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119365:3..545+ >mRNA_M-pyrifera_M_contig119365.3997.1 ID=mRNA_M-pyrifera_M_contig119365.3997.1|Name=mRNA_M-pyrifera_M_contig119365.3997.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig119365:3..545+ (Macrocystis pyrifera P11B4 male)back to top |