prot_M-pyrifera_M_contig119332.3986.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119332.3986.1
Unique Nameprot_M-pyrifera_M_contig119332.3986.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119332.3986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 12..45
e-value: 1.5E-5
score: 34.4
coord: 84..116
e-value: 0.08
score: 22.1
IPR001202WW domainPFAMPF00397WWcoord: 13..43
e-value: 1.2E-8
score: 34.9
coord: 85..115
e-value: 4.4E-7
score: 29.9
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 11..45
score: 13.24
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 83..116
score: 12.826
NoneNo IPR availableGENE3D2.20.70.10coord: 9..52
e-value: 2.2E-9
score: 38.8
NoneNo IPR availableGENE3D2.20.70.10coord: 81..116
e-value: 3.0E-8
score: 35.1
NoneNo IPR availablePANTHERPTHR21737POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3coord: 81..116
NoneNo IPR availablePANTHERPTHR21737:SF3POLYGLUTAMINE-BINDING PROTEIN 1coord: 11..50
coord: 81..116
NoneNo IPR availablePANTHERPTHR21737POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3coord: 11..50
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 83..115
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 8..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119332contigM-pyrifera_M_contig119332:23..370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119332.3986.1mRNA_M-pyrifera_M_contig119332.3986.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119332 23..370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119332.3986.1 ID=prot_M-pyrifera_M_contig119332.3986.1|Name=mRNA_M-pyrifera_M_contig119332.3986.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
RPDSISVLPDTELPDGWVEKFDAKKQKPYYVNKTLKQRSWSRPITKSSPL
PSVDGKADLAGSRSVSPKEVRFAAGVKMEDAGAGLPHGWKQKFDAKRKKP
YYVNKARKLRTWDLPN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf