mRNA_M-pyrifera_M_contig119306.3980.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: F0YLG4_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLG4_AURAN) HSP 1 Score: 196 bits (498), Expect = 1.690e-57 Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K WF +A ++VPWE GH++I VRR LLEDS+ A ++ DM++ FRFEFI EP +DAGGVAREWF VS LF+ D LW YS ++ + QINP+SG+AN +HL+ FHF GR LGKALFDRQ+V+ HL PL KHIL P+ ADLE LD D
Sbjct: 135 KEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDAD 291
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A7S3JWL0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWL0_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.770e-56 Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K WF +A ++VPWE GH++I +RR LLEDS+ A+ ++ +M++ FRFEFIGEP +DAGGVAREWF VS LF+ D LW YS ++ + Q+NP+SG+AN +HL+ FHF GR LGKALFDRQ+VS HL PL KHIL P+ DLE LD D
Sbjct: 412 KEAWFRQQIAKVQVPWEEGHIKINIRRENLLEDSMEAVESIAQNEMKKIFRFEFIGEPGVDAGGVAREWFQLVSDILFNPDFALWSYSSINQMNMQVNPSSGIANDEHLRYFHFTGRLLGKALFDRQIVSGHLVRPLYKHILGWPLMIDDLEQLDHD 568
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A7S3ZRC6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRC6_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.820e-56 Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K WF +A ++VPWE GH++I VRR LL+DS+ A ++ DM++ FRFEFI EP +DAGGVAREWF VS LF+ D LW YS ++ + QINP+SGVAN +HL+ FHF GR LGKALFDRQ+V+ HL PL KHIL P+ ADLE LD D
Sbjct: 347 KEAWFRQQIAKIQVPWEDGHIKINVRRENLLQDSMEATESITQGDMRKIFRFEFISEPGVDAGGVAREWFQLVSALLFNPDFALWSYSSINQMCMQINPSSGVANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPVTVADLEQLDAD 503
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: F0YHF6_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF6_AURAN) HSP 1 Score: 196 bits (498), Expect = 5.630e-56 Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K WF +A ++VPWE GH++I VRR LLEDS+ A ++ DM++ FRFEFI EP +DAGGVAREWF VS LF+ D LW YS ++ + QINP+SG+AN +HL+ FHF GR LGKALFDRQ+V+ HL PL KHIL P+ ADLE LD D
Sbjct: 364 KEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDAD 520
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A6S8T4N2_9STRA (Hypothetical protein n=12 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8T4N2_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.490e-55 Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K WF +A ++VPWE GH++I VRR LL+DS+ A ++ DM++ FRFEFI EP +DAGGVAREWF VS LF+ D LW YS ++ + QINP+SGVAN +HL+ FHF GR LGKALFDRQ+V+ HL PL KHIL P+ ADLE LD D
Sbjct: 347 KEAWFRQQIAKIQVPWEDGHIKINVRRENLLQDSMEATESITQGDMRKIFRFEFISEPGVDAGGVAREWFQLVSALLFNPDFALWSYSSINQMCMQINPSSGVANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPVTVADLEQLDAD 503
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A7S2RMX2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RMX2_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.440e-54 Identity = 89/155 (57.42%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLD 465
K++WF A M++ WE G V+I++RRS LL DS +++LSA DM RYFRFEFIGEP +DAGGVAREWF V+ F++D GL+ YS VDN+ YQINP+SG+AN HL+ F+F GR +GKALFD V+ AH+T PL KHIL P+ D+EF+D
Sbjct: 349 KLKWFREQCAAMKIKWEDGRVQIKIRRSELLRDSFTNLNKLSAKDMHRYFRFEFIGEPGIDAGGVAREWFQLVTDQCFNVDFGLFEYSGVDNICYQINPSSGIANELHLKYFYFLGRVMGKALFDGHVIGAHVTQPLYKHILGWPIGQKDIEFVD 503
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A7S2B6P4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6P4_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.130e-54 Identity = 87/157 (55.41%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K +WF +A +VPW+ GH+R+ VRRS LL DS+ AI + DM++ FRFEF EP +DAGGVAREW+H VS LF+ D L+ YS ++ + QINP SG+ N +HL+ FHF GR LGKALFDRQ+VS+HL PL KHIL+ P+ DLE LD D
Sbjct: 336 KEQWFRAQIAQQQVPWDEGHIRVHVRRSHLLMDSMEAIESIRKDDMRKIFRFEFQNEPGVDAGGVAREWYHLVSDELFNPDVALFTYSAINQMCMQINPMSGLCNEEHLRYFHFCGRLLGKALFDRQIVSSHLVLPLYKHILSWPLLMTDLESLDAD 492
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A836CEL7_9STRA (Ubiquitin protein ligase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEL7_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.050e-53 Identity = 88/156 (56.41%), Postives = 111/156 (71.15%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDR 468
K+ WF +RVPWE H +R+RR LLEDSL AI + M+ FRFEFIGEP +DAGGVAREWF VS+ LF+ D L++YS ++ + Q+NP+SGVAN +HL FHFAGR L KALFD Q+VSAHL PL KH+LA P+ F+DLE +D+
Sbjct: 332 KLAWFRTQCDGLRVPWEREHQHLRLRREVLLEDSLRAIESIRPAQMRERFRFEFIGEPGVDAGGVAREWFQLVSEQLFNPDFALFQYSSINQMCMQVNPSSGVANDEHLDFFHFAGRLLAKALFDAQLVSAHLVRPLYKHLLAWPIAFSDLEHVDK 487
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A7S1XME4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XME4_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.040e-52 Identity = 89/157 (56.69%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLDRD 471
K+ WF + V +RVPWE GH+ IRVRRS LL D+ A + A + ++YFRFEFIGEPA+DAGGVARE++ VS LF + GL+ S ++ QINPASG+AN HL F FAGR +GKALFD +V+AHL PL KHILA PM DLE LD D
Sbjct: 60 KVTWFQDVVRGLRVPWEDGHMAIRVRRSDLLHDAQEAYLAMEADEFRKYFRFEFIGEPAIDAGGVAREFYEIVSSQLFDANNGLFMSSAINQTCMQINPASGLANESHLDFFRFAGRLMGKALFDNHLVNAHLVRPLYKHILAWPMNLHDLEHLDYD 216
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Match: A0A7S3FLA4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FLA4_9VIRI) HSP 1 Score: 181 bits (460), Expect = 8.750e-51 Identity = 87/155 (56.13%), Postives = 107/155 (69.03%), Query Frame = 1
Query: 1 KMEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRFEFIGEPAMDAGGVAREWFHCVSQHLFSLDTGLWRYSHVDNLTYQINPASGVANSQHLQLFHFAGRFLGKALFDRQVVSAHLTTPLLKHILAAPMFFADLEFLD 465
K+ WF + + +R PWE GHV VRR+ LLEDS ++LSA DM+R FRF+F GEPA DAGGVAREWF VS LF++D GLW Y VDNL Y+IN ++ VAN F+FAGR LGKALFD Q V+ HL P KH+LA P+ DLE++D
Sbjct: 318 KVGWFRSMLQRLRTPWEQGHVSCTVRRANLLEDSFACFARLSADDMRRIFRFQFAGEPAQDAGGVAREWFELVSIALFNVDMGLWEYGAVDNLAYKINASAEVANDNAAAYFYFAGRLLGKALFDSQQVAPHLVLPYYKHMLAWPIMLRDLEYVD 472 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119306.3980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119306.3980.1 >prot_M-pyrifera_M_contig119306.3980.1 ID=prot_M-pyrifera_M_contig119306.3980.1|Name=mRNA_M-pyrifera_M_contig119306.3980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp MEWFHNAVANMRVPWEMGHVRIRVRRSCLLEDSLHAISQLSATDMQRYFRback to top mRNA from alignment at M-pyrifera_M_contig119306:72..542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119306.3980.1 ID=mRNA_M-pyrifera_M_contig119306.3980.1|Name=mRNA_M-pyrifera_M_contig119306.3980.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig119306:72..542+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119306:72..542+ >mRNA_M-pyrifera_M_contig119306.3980.1 ID=mRNA_M-pyrifera_M_contig119306.3980.1|Name=mRNA_M-pyrifera_M_contig119306.3980.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig119306:72..542+ (Macrocystis pyrifera P11B4 male)back to top |