prot_M-pyrifera_M_contig119298.3975.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119298.3975.1
Unique Nameprot_M-pyrifera_M_contig119298.3975.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length170
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A7S4IBY3_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IBY3_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 1.030e-25
Identity = 58/165 (35.15%), Postives = 98/165 (59.39%), Query Frame = 0 
Query:    6 WPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHPKYLE 170
            W T    I++ ++ ++    E NKP MV  + L+ V +G   P LS+VIV+    +    +    L S+++ME+ A     + P+LV++   K++ R+ AWLIP+ PF+S +++SF+  P ID+ VK I +GPDV++ +PGLS AIK M   +    +++P + E
Sbjct:   88 WFTSEEFITSTVISEATTLFENNKPSMVHELSLKNVKIGRKCPTLSEVIVHDVAPDQFHFDAQFQLYSEMSMELEAKLGLTKFPVLVRDVFIKSQIRIHAWLIPQPPFISHVQISFVGEPVIDMIVKLIKIGPDVMS-IPGLSAAIKKMMCDIIHQLFVYPNFYE 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A7S4MIX7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MIX7_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 4.590e-25
Identity = 58/165 (35.15%), Postives = 98/165 (59.39%), Query Frame = 0 
Query:    6 WPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHPKYLE 170
            W T    I++ ++ ++    E NKP MV  + L+ V +G   P LS+VIV+    +    +    L S+++ME+ A     + P+LV++   K++ R+ AWLIP+ PF+S +++SF+  P ID+ VK I +GPDV++ +PGLS AIK M   +    +++P + E
Sbjct:   88 WFTSEEFITSTVISEATTLFENNKPSMVHELSLKNVKIGRKCPTLSEVIVHDVAPDQFHFDAQFQLYSEMSMELEAKLGLTKFPVLVRDVFIKSQIRIHAWLIPQPPFISHVQISFVGEPVIDMIVKLIKIGPDVMS-IPGLSAAIKKMMCDIIHQLFVYPNFYE 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Match: A0A388L5W7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L5W7_CHABU)

HSP 1 Score: 52.8 bits (125), Expect = 6.600e-5
Identity = 46/164 (28.05%), Postives = 75/164 (45.73%), Query Frame = 0 
Query:   25 LEANKPMMVSRMCLEGVTMGMVPPILSDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKARSRV------TAW---------------LIPREPFLSQMRVSFLERPDIDVTVKP-ISVGPDVINLVPGLSGAIKDMFIGMFSDQWIHP 166
            LE  KP  + +  L+ + +G  PP++  + V++            N D    +EM      A    +V E Q + R RV      TA+                +P  PF+ +MRV F+ERP++DV+VKP ++ G DV   +PG+S  +  +   +FS   + P
Sbjct:  175 LERFKPWTLRKAVLKSLKLGSSPPVVLQMRVFEEP----------NEDDHAVVEMVVEFLAA--DDMVAELQARVRKRVGLGVWATAYASDLHLEGKVLVGLKFLPGFPFIERMRVCFVERPNLDVSVKPLVNAGVDVTE-IPGISTYVDSIIDTLFSQALVKP 325
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119298.3975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S4IBY3_9EUKA1.030e-2535.15Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4MIX7_9EUKA4.590e-2535.15Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A388L5W7_CHABU6.600e-528.05Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46980FAMILY NOT NAMEDcoord: 6..156
NoneNo IPR availablePANTHERPTHR46980:SF2TRICALBIN-1-RELATEDcoord: 6..156
IPR031468Synaptotagmin-like mitochondrial-lipid-binding domainPROSITEPS51847SMPcoord: 1..170
score: 12.364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119298contigM-pyrifera_M_contig119298:35..544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119298.3975.1mRNA_M-pyrifera_M_contig119298.3975.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119298 5..544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119298.3975.1 ID=prot_M-pyrifera_M_contig119298.3975.1|Name=mRNA_M-pyrifera_M_contig119298.3975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
MMLIAWPTMGPHISNIIMEKSVDALEANKPMMVSRMCLEGVTMGMVPPIL
SDVIVYKSDANILDIECTINLDSQIAMEMAAYTKPARVPILVKEPQFKAR
SRVTAWLIPREPFLSQMRVSFLERPDIDVTVKPISVGPDVINLVPGLSGA
IKDMFIGMFSDQWIHPKYLE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031468SMP_LBD