prot_M-pyrifera_M_contig119295.3974.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig119295.3974.1
Unique Name	prot_M-pyrifera_M_contig119295.3974.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	108

Homology

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7W8FZ16_9GAMM (Uncharacterized protein n=1 Tax=Chiayiivirga flava TaxID=659595 RepID=A0A7W8FZ16_9GAMM)

HSP 1 Score: 110 bits (276), Expect = 4.640e-26
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVA-VDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAPEF 108
            N+AP L   TFT+ ENSA GT VGS +  TD D GQTLTY++  GNTG  F +D +TG + VA   ALDFE    + LT    DDG PALSATAT+ ++L DVNEAP+ 
Sbjct:  260 NQAPTLDPQTFTLAENSAAGTAVGS-IAGTDPDAGQTLTYAITGGNTGNAFAIDAATGAISVANAAALDFEAGATFALTVTATDDGDPALSATATITIDLDDVNEAPQI 367

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7L4ZXL2_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Hymenobacter busanensis TaxID=2607656 RepID=A0A7L4ZXL2_9BACT)

HSP 1 Score: 109 bits (272), Expect = 1.600e-25
Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAPEF 108
            N AP +   T TV EN+A G  VG+ + A+D D GQTLTYS+ AGNTGG F ++ S+GQ+ VA  A L+FE    Y LT QV D+G+P+ SA+ATV VNL +VNEAP  
Sbjct:  403 NNAPTISSQTRTVAENAANGNNVGAVVTASDPDAGQTLTYSITAGNTGGAFAINASSGQITVANSAQLNFEATPSYALTVQVADNGIPSRSASATVTVNLTNVNEAPSI 511

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: UPI0019E3678B (Cadherin domain-containing protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019E3678B)

HSP 1 Score: 106 bits (264), Expect = 1.930e-24
Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            NEAPV   ATFT+DEN A G+ VG+  +ATD D G TLTYS++AGN  G F +D +TG + VA  A LDFE    + LT +V D+G P L  TAT+ +NL D+NEAP
Sbjct: 1124 NEAPVANDATFTIDENLAAGSFVGTA-IATDEDFGDTLTYSIIAGNDNGAFAIDPATGDITVANSAALDFETTPTFALTVRVRDNGNPRLEDTATITINLNDLNEAP 1229

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7C6VZJ3_9GAMM (Tandem-95 repeat protein n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VZJ3_9GAMM)

HSP 1 Score: 105 bits (263), Expect = 2.620e-24
Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            N  PV+  A F++ ENSA G  VGSP+  TD D GQT T+++  GNTG  F ++ +TGQ+ VA  A LDFE    ++LT QV DDG PA S +ATV +NL +VNEAP
Sbjct:  698 NSPPVVDAANFSIAENSADGASVGSPITFTDPDTGQTHTFAITGGNTGDAFAINANTGQITVASGAALDFETTPTFSLTVQVTDDGTPAQSGSATVTINLTNVNEAP 804

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: UPI0019F10434 (Cadherin domain-containing protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019F10434)

HSP 1 Score: 104 bits (259), Expect = 9.050e-24
Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            NEAPVL   TF+++ENS V T+VG  L+A D D GQTLTYS+ AGN  G F +D +TG + VA  A LDFE  T + LT  V DDG P LS TA VV+N+ DVNE P
Sbjct: 1127 NEAPVLADRTFSLNENSPVDTVVGQ-LMAVDSDLGQTLTYSITAGNESGAFAIDPATGIITVADSAPLDFETTTTFQLTISVTDDGEPPLSDTADVVINILDVNEPP 1232

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A7L4ZVQ8_9BACT (Cadherin domain-containing protein n=1 Tax=Hymenobacter busanensis TaxID=2607656 RepID=A0A7L4ZVQ8_9BACT)

HSP 1 Score: 102 bits (254), Expect = 4.280e-23
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNE 104
            N  PV+   TF++ ENS   T+VG+ + A+D D GQTLTYSL AGNTGG F ++ STGQLRVA  A LD+E  T + LT QV D+G P+ +A+AT+ VNL +V++
Sbjct:  476 NANPVIAAQTFSIAENSVNNTVVGT-VAASDPDAGQTLTYSLTAGNTGGAFSINSSTGQLRVANSAALDYETTTSFALTVQVADNGSPSKNASATITVNLTNVDD 579

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A482UPP8_9ARCH (Cadherin repeat domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPP8_9ARCH)

HSP 1 Score: 100 bits (250), Expect = 1.490e-22
Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            N+ P++   + ++ ENSAVG  VG+P+V TD D  Q L YS+ +GN    FE++ STGQ+RVA   LDFE RT Y L+ Q  D+G+  LSA  TV +++ DV EAP
Sbjct: 1102 NDPPIMPDYSRSIAENSAVGANVGAPVVGTDTDAAQVLAYSISSGNVDDTFEINSSTGQVRVARALLDFETRTRYVLSVQCTDNGMGRLSAVGTVTIDVTDVGEAP 1207

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: R7UW24_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UW24_CAPTE)

HSP 1 Score: 99.4 bits (246), Expect = 3.970e-22
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAV-GTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            N+AP L  A+F+V+EN A  G++V   + ATDVD GQ+ TYS+++GN  G F +D +TG++ V V  LD E   +Y+LT QV DDG PALS TATV +++ D+NEAP
Sbjct:   93 NDAPELSDASFSVNENVASDGSIVLGTMTATDVDVGQSKTYSILSGNDDGHFAIDSNTGEISV-VGNLDHEGTAQYSLTVQVTDDGSPALSDTATVTIDVNDINEAP 198

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: UPI001B305C62 (cadherin domain-containing protein n=1 Tax=Hymenobacter terricola TaxID=2819236 RepID=UPI001B305C62)

HSP 1 Score: 99.4 bits (246), Expect = 5.120e-22
Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDA-LDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            N  PV+   +F++ ENSA  T+VG+ + A+D D GQTLTY++ AGNTG  F ++ +TGQL VA  A LDFE    + LT +V D+G P L+ + TV VNL +VNEAP
Sbjct:  575 NRPPVIAAQSFSLAENSAAATVVGT-VAASDPDAGQTLTYAITAGNTGTAFAINATTGQLTVATPAALDFETTPSFALTVRVTDNGTPVLNTSNTVTVNLTNVNEAP 680

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BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Match: A0A1M6LVH8_9BACT (Fibronectin type III domain-containing protein n=1 Tax=Rubritalea squalenifaciens DSM 18772 TaxID=1123071 RepID=A0A1M6LVH8_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 5.150e-22
Identity = 52/106 (49.06%), Postives = 77/106 (72.64%), Query Frame = 0

Query:    1 NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGVFEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLRDVNEAP 106
            N APV+ G +F++ ENS +GT+VG+ +VA D D GQ+L+Y++ AGNTGG F V+  TG++     ALD+E+ ++Y L+ +V D G+  LS TA++ VN+ DVNEAP
Sbjct: 1322 NSAPVIAGQSFSIAENSTIGTVVGT-IVAADPDQGQSLSYAITAGNTGGEFTVNSGTGEITTTT-ALDYEKNSQYVLSVEVTDAGL--LSDTASITVNVNDVNEAP 1423

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig119295.3974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7W8FZ16_9GAMM	4.640e-26	55.05	Uncharacterized protein n=1 Tax=Chiayiivirga flava...	[more]
A0A7L4ZXL2_9BACT	1.600e-25	54.13	T9SS type A sorting domain-containing protein n=1 ...	[more]
UPI0019E3678B	1.930e-24	54.21	Cadherin domain-containing protein n=1 Tax=Leptoly...	[more]
A0A7C6VZJ3_9GAMM	2.620e-24	52.34	Tandem-95 repeat protein n=1 Tax=Xanthomonadaceae ...	[more]
UPI0019F10434	9.050e-24	57.01	Cadherin domain-containing protein n=1 Tax=Leptoly...	[more]
A0A7L4ZVQ8_9BACT	4.280e-23	53.33	Cadherin domain-containing protein n=1 Tax=Hymenob...	[more]
A0A482UPP8_9ARCH	1.490e-22	48.11	Cadherin repeat domain-containing protein (Fragmen...	[more]
R7UW24_CAPTE	3.970e-22	51.40	Uncharacterized protein (Fragment) n=1 Tax=Capitel...	[more]
UPI001B305C62	5.120e-22	50.47	cadherin domain-containing protein n=1 Tax=Hymenob...	[more]
A0A1M6LVH8_9BACT	5.150e-22	49.06	Fibronectin type III domain-containing protein n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002126	Cadherin-like	SMART	SM00112	CA_2	coord: 27..107 e-value: 1.5E-18 score: 77.7
IPR002126	Cadherin-like	PFAM	PF00028	Cadherin	coord: 10..99 e-value: 2.6E-16 score: 59.8
None	No IPR available	GENE3D	2.60.40.60		coord: 6..108 e-value: 2.6E-22 score: 81.5
None	No IPR available	PANTHER	PTHR24025	FAMILY NOT NAMED	coord: 2..104
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 10..108 score: 21.774
IPR015919	Cadherin-like superfamily	SUPERFAMILY	49313	Cadherin-like	coord: 6..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig119295	contig	M-pyrifera_M_contig119295:11..334 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig119295.3974.1	mRNA_M-pyrifera_M_contig119295.3974.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig119295 11..334 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig119295.3974.1 ID=prot_M-pyrifera_M_contig119295.3974.1|Name=mRNA_M-pyrifera_M_contig119295.3974.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
NEAPVLQGATFTVDENSAVGTLVGSPLVATDVDGGQTLTYSLVAGNTGGV
FEVDGSTGQLRVAVDALDFERRTEYTLTAQVVDDGVPALSATATVVVNLR
DVNEAPEF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002126	Cadherin-like_dom
IPR015919	Cadherin-like_sf