mRNA_M-pyrifera_M_contig119208.3961.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A6H5JTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTY6_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.120e-25 Identity = 47/111 (42.34%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 37 GGTAALRLLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEF 369
G A + WV + R +L+++PF P ++ ++G+W +WKVGLRKP+ ++P A LT +WSPTR G+LF+G+ DGS D+WDF +S+ TP++T+ + + +TS+EF
Sbjct: 743 GDVAPEFVKWVSSDHTRPCVALDKSPFFPGVLLSVGDWSFQIWKVGLRKPVFSSPMAANYLTTGRWSPTRPGMLFLGKVDGSMDVWDFTDSSFTPSVTLMSSPSRITSMEF 853
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: D8LLD9_ECTSI (Putative PKG-Ib n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD9_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.130e-25 Identity = 47/111 (42.34%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 37 GGTAALRLLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEF 369
G A + WV + R +L+++PF P ++ ++G+W +WKVGLRKP+ ++P A LT +WSPTR G+LF+G+ DGS D+WDF +S+ TP++T+ + + +TS+EF
Sbjct: 737 GDVAPEFVKWVSSDHTRPCVALDKSPFFPGVLLSVGDWSFQIWKVGLRKPVFSSPMAANYLTTGRWSPTRPGMLFLGKVDGSMDVWDFTDSSFTPSVTLMSSPSRITSMEF 847
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A7S2SK86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK86_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.100e-23 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 1
Query: 25 EEGRGGTAALRLLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEF 369
EEG G A + W+ + R +L+ +PF P+L+ ++G+W LW +G PI ++P A L+ +WSPTR G+LFVG+ DGS D+WD +S+ PALT ST VT LEF
Sbjct: 644 EEGDGTDAPEYVQWMAPDHPRPCVALQPSPFFPNLLLSVGDWSFQLWMLGREVPIFSSPAASTSLSSGRWSPTRPGMLFVGKLDGSMDVWDLTDSSYKPALTCTVASTQVTELEF 758
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A6U4HRU9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HRU9_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.640e-19 Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 1 GGGEKGDKEEGRGGTAALRLLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEF 369
G G+ + EE G +LW + R SL+++PF + ++G+W LWK+G++KPI ++P + A LT +WSP+R +LF+ R DGS D+WDF +++ + + A +TS+EF
Sbjct: 222 GSGQPAEGEEDDGVDVPECVLWTAKDHSRPCVSLQQSPFFEEVFLSVGDWSFQLWKLGVQKPIFSSPISDAYLTNGRWSPSRPAVLFISRIDGSIDVWDFTDTSYRHSQRLNASPNRITSIEF 344
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: F0YDW1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDW1_AURAN) HSP 1 Score: 94.0 bits (232), Expect = 3.000e-19 Identity = 39/104 (37.50%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 58 LLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEF 369
+ W+ + R L ++PF P +V ++G+W+ LWK+ +PI ++P+A LT WSPTR G+L++ R+DGS D+WD +S+ PA + T +TS++F
Sbjct: 559 VQWMAPDHSRPATVLMKSPFFPDMVLSVGDWNFQLWKLDHPRPIFSSPQASVSLTTGCWSPTRPGMLYMARSDGSVDVWDLTDSSYRPAAQLMVAPTRITSIKF 662
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A7S3NKH4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKH4_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.490e-16 Identity = 40/106 (37.74%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 58 LLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVG--LRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEF 369
+ W + R +LE++PF LV +IG+++ LWK+ L +P+ ++P++ +PLT WSPTR G++F RADG+ D+WD +S+ P+ + T VT+L+F
Sbjct: 762 VCWTAPDHTRPPIALEKSPFFDDLVMSIGDYNFQLWKLDACLLQPVYSSPQSTSPLTAGCWSPTRPGVIFTARADGTLDVWDIPDSSRRPSHQLMVAPTRVTALKF 867
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A7S2RYD5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RYD5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 5.100e-16 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 55 RLLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTP--RAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEFQ 372
++ WV + R L R+PF P LV ++ ++WK L +P+ ++P A LT A+WSPTR G++ VGR DGS D+WD + + P+ T+P + +TS+ F+
Sbjct: 723 KVAWVARDHFRDCCGLCRSPFFPFLVLSVSANQFNIWKEDLNRPLFSSPIVTGTAHLTCAEWSPTRPGVIIVGRNDGSVDIWDLMDQSYRPSTTVPIAAYAITSIHFR 830
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: UPI001B887F2D (dynein intermediate chain 3, axonemal-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887F2D) HSP 1 Score: 81.6 bits (200), Expect = 6.000e-15 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 100 LERNPFLPSLVAAIGEWHVSLWKVGLRK-PILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSL 363
L+R+PF ++ IG W SLWK G+ PILT P LT WSPTR G+ +V +ADGS D+WD + T PALT + +T++
Sbjct: 766 LQRSPFFKDVLLVIGGWTFSLWKEGVTSGPILTCAANPVKLTSGHWSPTRPGVFYVAKADGSIDIWDLLDKTHEPALTQSVSTASITTV 854
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A8J6CA46_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA46_DIALT) HSP 1 Score: 80.1 bits (196), Expect = 2.030e-14 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 97 SLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAPAPLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAIS-TGVTSLEFQTQK 381
+L+R+PF + +G+W +WK G+ PI ++P P LT WSP+RA ++F+ +ADGS D+WD A+ T P+ + + VTSL+ Q+
Sbjct: 637 ALQRSPFFRDIYLTVGDWSSHVWKEGVSAPIFSSPYTPERLTAGCWSPSRAAVIFLAKADGSVDVWDLADRTHEPSTSFNVVGGAAVTSLDMFAQQ 732
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Match: A0A2R5G2A5_9STRA (Cytoplasmic dynein 1 intermediate chain n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2A5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.860e-14 Identity = 35/108 (32.41%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 55 RLLWVELELGRAGRSLERNPFLPSLVAAIGEWHVSLWKVGLRKPILTTPRAP--APLTMAKWSPTRAGLLFVGRADGSFDLWDFAESTLTPALTIPAISTGVTSLEFQ 372
++ WV + + +L R+PF P L+ ++ ++WK L +PI ++P + A L A+WSPTR G++ VG+ DG+ D+WDF + + P+++ + +TS++F+
Sbjct: 874 KVYWVARDHFASCLALRRSPFFPYLILSVSAHSFNIWKEDLAQPIFSSPLSTGMAHLACAEWSPTRPGVIMVGKTDGTVDIWDFVDQSHRPSVSASITAYAITSMQFR 981 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119208.3961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119208.3961.1 >prot_M-pyrifera_M_contig119208.3961.1 ID=prot_M-pyrifera_M_contig119208.3961.1|Name=mRNA_M-pyrifera_M_contig119208.3961.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp GGGEKGDKEEGRGGTAALRLLWVELELGRAGRSLERNPFLPSLVAAIGEWback to top mRNA from alignment at M-pyrifera_M_contig119208:29..526- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119208.3961.1 ID=mRNA_M-pyrifera_M_contig119208.3961.1|Name=mRNA_M-pyrifera_M_contig119208.3961.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig119208:29..526- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119208:29..526- >mRNA_M-pyrifera_M_contig119208.3961.1 ID=mRNA_M-pyrifera_M_contig119208.3961.1|Name=mRNA_M-pyrifera_M_contig119208.3961.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig119208:29..526- (Macrocystis pyrifera P11B4 male)back to top |