prot_M-pyrifera_M_contig119197.3956.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig119197.3956.1
Unique Name	prot_M-pyrifera_M_contig119197.3956.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	145

Homology

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BLAST of mRNA_M-pyrifera_M_contig119197.3956.1 vs. uniprot
Match: A0A518FQV5_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FQV5_9PLAN)

HSP 1 Score: 58.2 bits (139), Expect = 4.120e-7
Identity = 42/144 (29.17%), Postives = 69/144 (47.92%), Query Frame = 0

Query:    2 NWLAEGIVPSGTYGFLGGPYKSLKTWFSVMLAMCISCGAPFLGKKT--RKSRVLFYSGEASEFCLKRITDSLYEACAINPWDCE-IEFKTEVPNIRDKAWLIRLWRKIRKDQIDLLIIDPLYK--STGSVNSSNLFSVGESLKP 140
             +L  G++  G    + GP K LKT F + L  CI+ G     + T      V   SGE+    ++     + ++   +P   E       +P++  +  + ++ + I++ Q+  LI DP Y   S G  ++SNLFSVGE LKP
Sbjct:   29 EYLVNGVLVKGQPCIIAGPKKCLKTNFLIALGFCIATGNKLFNRFTVPNTCNVGIMSGESGAATIQETFSRIVKSYGWSPQSTEGFHVCFNLPSLESQLDIDQVAQTIKEKQLGALIFDPAYLCLSLGE-SASNLFSVGEKLKP 171

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig119197.3956.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig119197.3956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A518FQV5_9PLAN	4.120e-7	29.17	Uncharacterized protein n=3 Tax=Gimesia panareensi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..145 e-value: 1.0E-16 score: 62.7
None	No IPR available	PFAM	PF13481	AAA_25	coord: 2..144 e-value: 3.8E-14 score: 52.7
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 26..44
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 45..145
None	No IPR available	TMHMM	TMhelix		coord: 27..44
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..122

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig119197	contig	M-pyrifera_M_contig119197:112..546 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig119197.3956.1	mRNA_M-pyrifera_M_contig119197.3956.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig119197 112..546 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig119197.3956.1 ID=prot_M-pyrifera_M_contig119197.3956.1|Name=mRNA_M-pyrifera_M_contig119197.3956.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
INWLAEGIVPSGTYGFLGGPYKSLKTWFSVMLAMCISCGAPFLGKKTRKS
RVLFYSGEASEFCLKRITDSLYEACAINPWDCEIEFKTEVPNIRDKAWLI
RLWRKIRKDQIDLLIIDPLYKSTGSVNSSNLFSVGESLKPFSSIC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase