mRNA_M-pyrifera_M_contig119186.3952.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A2E7KIP8_9PLAN (Uncharacterized protein n=9 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KIP8_9PLAN) HSP 1 Score: 389 bits (998), Expect = 1.900e-134 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 1
Query: 1 GGHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GGHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFL+FKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP
Sbjct: 72 GGHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLVFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 252
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A6C5T5_9PLAN (Uncharacterized protein n=11 Tax=Planctomycetaceae TaxID=126 RepID=A6C5T5_9PLAN) HSP 1 Score: 368 bits (944), Expect = 3.000e-126 Identity = 171/181 (94.48%), Postives = 174/181 (96.13%), Query Frame = 1
Query: 1 GGHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GGHMLFPTSRILIMQSDD KTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADG EWSKPIMLEGTYGHYIWRAAAY KAYLCGRRIRHFA+ D+ RELIETAILESDDGLVWKTASLFNE+QGDETAFLFE NGDLLAIGRSGSNPAWVMRSRP
Sbjct: 72 GGHMLFPTSRILIMQSDDAKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGNEWSKPIMLEGTYGHYIWRAAAYKDKAYLCGRRIRHFAQGDKDRELIETAILESDDGLVWKTASLFNEKQGDETAFLFEDNGDLLAIGRSGSNPAWVMRSRP 252
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A517W099_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W099_9PLAN) HSP 1 Score: 358 bits (919), Expect = 1.960e-122 Identity = 161/181 (88.95%), Postives = 174/181 (96.13%), Query Frame = 1
Query: 1 GGHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GGHMLFP+SRIL+MQSDDTKTWKQV+EFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGD+ PKTRT+N+HLG+AVW+ADG WSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRI+HF + D+ RELIETAILESDDGLVWKTASLFNE+QGDETAFLFEKNGDLLAIGRSG+ PAWVMRSRP
Sbjct: 72 GGHMLFPSSRILVMQSDDTKTWKQVEEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDAPPKTRTLNQHLGYAVWTADGTNWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIKHFTEGDKDRELIETAILESDDGLVWKTASLFNEKQGDETAFLFEKNGDLLAIGRSGTKPAWVMRSRP 252
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A517RCG4_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RCG4_9PLAN) HSP 1 Score: 353 bits (906), Expect = 1.850e-120 Identity = 161/181 (88.95%), Postives = 172/181 (95.03%), Query Frame = 1
Query: 1 GGHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GGHMLFP+SRILIMQSDD +TWKQVDEFSVP+RDVRDPHFLIFKDKLFVYTGTWYCGD+ PKTRTIN+HLG+AVWSADG WSKP MLEGTYGHYIWRAAAY KAYLCGRRIR+F +D++ RELIETAILESDDGLVWKTASLFNE+QGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP
Sbjct: 72 GGHMLFPSSRILIMQSDDAETWKQVDEFSVPRRDVRDPHFLIFKDKLFVYTGTWYCGDAPPKTRTINQHLGYAVWSADGSNWSKPTMLEGTYGHYIWRAAAYGDKAYLCGRRIRNFTEDNKDRELIETAILESDDGLVWKTASLFNEKQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 252
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A517ZYV3_9PLAN (Uncharacterized protein n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZYV3_9PLAN) HSP 1 Score: 257 bits (656), Expect = 1.440e-82 Identity = 119/184 (64.67%), Postives = 143/184 (77.72%), Query Frame = 1
Query: 4 GHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRE---LIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSN-PAWVMRSRP 543
GHM+ PTS I+I SDDTKTWK V +FSVPKRDVRDPHFL+FKDKLFVYTG WYCGD++PK +++HLG+A WS DG+ W P+MLEGTYGHYIWRAAA+ KAYLCGRR R FAK E LIE+A+LESDDGL+++ +LF GDETAFLFE +G +LA+ RSGS A + RS+P
Sbjct: 70 GHMVHPTSSIIIQSSDDTKTWKTVHQFSVPKRDVRDPHFLVFKDKLFVYTGAWYCGDTSPKNYKMDDHLGYAAWSDDGENWHSPVMLEGTYGHYIWRAAAHGDKAYLCGRRKREFAKTTTRAERDPLIESAMLESDDGLIYRKKALFQTTNGDETAFLFEDDGSVLAVARSGSKLNAQLCRSQP 253
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A7X7YVR8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7YVR8_9BACT) HSP 1 Score: 256 bits (654), Expect = 2.890e-82 Identity = 114/181 (62.98%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 4 GHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRT--INEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGR-ELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRS 537
GHM+ P+S I+I+ S D W+QV FSVPKRD RDPHFL+FKD+LFVYTGTWYCGD++P+ +NEHLG+A WS DG +W+ PIMLEGT+GHYIWRA +DGKAYLCGRR + FA +G +E+A+LESDDGL+W+T SLF E GDETAFLFE NGD+LAIGR G A +++S
Sbjct: 69 GHMVHPSSSIIILSSPDASEWRQVHRFSVPKRDTRDPHFLVFKDRLFVYTGTWYCGDTSPRYEDCDLNEHLGYAAWSQDGVQWNGPIMLEGTFGHYIWRATTFDGKAYLCGRRKKDFAVGPRGEGPTVESAMLESDDGLIWRTRSLFQETDGDETAFLFEANGDILAIGRRGRGNAQLLKS 249
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A2E7LAJ4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7LAJ4_9PLAN) HSP 1 Score: 253 bits (645), Expect = 6.840e-81 Identity = 112/181 (61.88%), Postives = 143/181 (79.01%), Query Frame = 1
Query: 4 GHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSAPKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDD-QGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GH ++PTS I+I++S D +TW+ V F V KRD RDPHFL+FKDKLFVYTGTWYCGDSAP+ R N+HLG+AVWSADG+ WS+P+MLEGTYGHYIWRAAA+DG AYLCGRR R F + + R +E+A+L SDDGL+W+T +LF QG+ETAFLFE +G +LA+ R + + + R+RP
Sbjct: 73 GHSVYPTSTIIILESVDARTWRPVHHFRVAKRDTRDPHFLVFKDKLFVYTGTWYCGDSAPEVREFNKHLGYAVWSADGRGWSEPVMLEGTYGHYIWRAAAHDGTAYLCGRRKREFVETPGKIRSDVESAMLASDDGLIWRTRALFQTTQGNETAFLFEPDGSVLAVARFTLDNSQLCRARP 253
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: UPI0013DA802D (hypothetical protein n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DA802D) HSP 1 Score: 249 bits (636), Expect = 2.180e-79 Identity = 118/183 (64.48%), Postives = 144/183 (78.69%), Query Frame = 1
Query: 4 GHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSA-PKTR-TINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQG-RELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GHM+ PTS IL++ S D + WKQV FSV KRD RDPHFLIFKD+LFVYTGTWY GD+ P+ + +N HLG+AV + DG +W++PIMLEGT+GHYIWRAAA DGKAYLCGRR F ++G RELIE+A+LESDDGLVW+T SLF E QGDETAF F+ G+ LA+ R GS PA ++RS+P
Sbjct: 71 GHMVHPTSSILVLSSKDGQDWKQVHRFSVAKRDTRDPHFLIFKDRLFVYTGTWYSGDTTLPRDQYDLNMHLGYAVHTEDGTDWTEPIMLEGTFGHYIWRAAAVDGKAYLCGRRKHQFVAGERGNRELIESAMLESDDGLVWRTHSLFQETQGDETAFQFDAEGNALAVARRGSAPAELLRSQP 253
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A7Y5W6X6_9BACT (Uncharacterized protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5W6X6_9BACT) HSP 1 Score: 249 bits (635), Expect = 2.660e-79 Identity = 113/182 (62.09%), Postives = 141/182 (77.47%), Query Frame = 1
Query: 4 GHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSA-PKTR-TINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GHM+ PTS IL++ SDDT+ WK+ FSVP RD RDPHFL F+ KLFVYTGTWY GD P + +N+HLGFA W+ADGK WS P LEGTYGHYIWRAAA DGKAYLCGRR R A+ R+L+E+A+L+SDDGL+W+ +LF E +GDETAF+FEK+G L+A+ R GS PA +++S+P
Sbjct: 78 GHMVHPTSSILVLSSDDTRQWKEEHRFSVPNRDTRDPHFLSFQGKLFVYTGTWYSGDGPLPHDQYDLNKHLGFAAWTADGKAWSGPQQLEGTYGHYIWRAAALDGKAYLCGRRNRGHAQVSGERDLVESAMLQSDDGLIWRFRALFQENRGDETAFVFEKDGSLIAVSRCGSQPAQLVKSKP 259
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Match: A0A7C7WTE3_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7WTE3_9PLAN) HSP 1 Score: 248 bits (632), Expect = 6.510e-79 Identity = 111/182 (60.99%), Postives = 145/182 (79.67%), Query Frame = 1
Query: 4 GHMLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTWYCGDSA--PKTRTINEHLGFAVWSADGKEWSKPIMLEGTYGHYIWRAAAYDGKAYLCGRRIRHFAKDDQGRELIETAILESDDGLVWKTASLFNERQGDETAFLFEKNGDLLAIGRSGSNPAWVMRSRP 543
GHM+ PTS I ++ S D KTW++V FSV KR+ RDPHFL+F+ KLF+YTGTWY G++ K +N+HLG+ VW+A+GK+WS+P LEGTYGHYIWRAA YDGKAYLCGRR R A+ R+L+E+A+LESDDGLVW+ SLF + +GDETAFLFE++G +LA+ RSGS+PA ++RS+P
Sbjct: 72 GHMVHPTSSIRVLSSSDLKTWQEVHAFSVNKRETRDPHFLVFQGKLFIYTGTWYSGETTLPRKDYDLNKHLGYGVWTAEGKKWSRPQPLEGTYGHYIWRAAEYDGKAYLCGRRNRDHAQVYGERDLVESAMLESDDGLVWRFHSLFQKDRGDETAFLFEEDGSILAVSRSGSSPAQLVRSKP 253 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119186.3952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119186.3952.1 >prot_M-pyrifera_M_contig119186.3952.1 ID=prot_M-pyrifera_M_contig119186.3952.1|Name=mRNA_M-pyrifera_M_contig119186.3952.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp MLFPTSRILIMQSDDTKTWKQVDEFSVPKRDVRDPHFLIFKDKLFVYTGTback to top mRNA from alignment at M-pyrifera_M_contig119186:3..545+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119186.3952.1 ID=mRNA_M-pyrifera_M_contig119186.3952.1|Name=mRNA_M-pyrifera_M_contig119186.3952.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig119186:3..545+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119186:3..545+ >mRNA_M-pyrifera_M_contig119186.3952.1 ID=mRNA_M-pyrifera_M_contig119186.3952.1|Name=mRNA_M-pyrifera_M_contig119186.3952.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig119186:3..545+ (Macrocystis pyrifera P11B4 male)back to top |