prot_M-pyrifera_M_contig119182.3951.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119182.3951.1
Unique Nameprot_M-pyrifera_M_contig119182.3951.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A3E0NCR7_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NCR7_9BACT)

HSP 1 Score: 70.1 bits (170), Expect = 7.260e-13
Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    7 AEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            AE AE K   +R Q                   YA +PL+ DLLPV DNI RAI AAE++   AGLLEG +MV   L SVLEKH
Sbjct:   47 AELAEAKQRLVRGQADLDNFRKRAARELESERRYAALPLLADLLPVADNIQRAIAAAEESEHEAGLLEGFRMVADQLTSVLEKH 130          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A847GMI9_9BACT (Protein GrpE n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GMI9_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 2.540e-12
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    3 QRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            Q+  ++ AE ++ ALRA                    YA +PL+RDLLPV+DN++RAI +A+Q+  SAGLLEGVKMV   L +VL++H
Sbjct:   69 QQLPSQLAEAEDRALRAYAELENYRKRANRLLQEEVKYAPLPLLRDLLPVVDNLERAIQSADQSGGSAGLLEGVKMVAQQLLAVLDQH 156          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A1G2Z8F3_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2Z8F3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 2.830e-12
Identity = 39/84 (46.43%), Postives = 48/84 (57.14%), Query Frame = 0
Query:    7 AEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            AE    K+  LR Q                   YA +PL+RDLLPVLDN++RAI AAE+  ++A LL GVKMV G L  VLE+H
Sbjct:   49 AELEAAKDRELRTQAELENYRKRVARQMEEERRYADLPLLRDLLPVLDNMERAIEAAEKTHDTASLLAGVKMVAGQLEEVLERH 132          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A7V4HU67_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HU67_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 1.470e-11
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            ++ R  AE  + K+ ALR                     YA +PL+RDLLPVLDN+ RA+ A+E+N + AGLLEGVKMV     +VL +H
Sbjct:   29 EVARLKAELEDVKDRALRGWAELENYRKRSARQMEEERRYAALPLLRDLLPVLDNMKRAVDASEKNHDLAGLLEGVKMVVQQFETVLARH 118          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A1Z8NCC2_9PLAN (Protein GrpE n=1 Tax=Planctomycetaceae bacterium TMED10 TaxID=1986833 RepID=A0A1Z8NCC2_9PLAN)

HSP 1 Score: 65.9 bits (159), Expect = 3.290e-11
Identity = 39/90 (43.33%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            D +R   E  +  N ALRAQ                   YA MPL+RDLLP+LDNI RAI AAE++  +  LLEG K+V   L+S+L +H
Sbjct:   47 DAERRQLELLDANNRALRAQADLDNYRKRVQREQQQESRYALMPLLRDLLPLLDNIQRAIEAAEKHQGTESLLEGFKLVAQQLQSILIQH 136          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A5Q4GY79_9PLAN (Protein GrpE n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GY79_9PLAN)

HSP 1 Score: 65.5 bits (158), Expect = 5.360e-11
Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    7 AEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            A+ A   + A+RAQ                   YA +PL+R LLPV+DN+DRA+ +AE+N +  GLLEGV++V    RSVL++H
Sbjct:   57 ADLAAANDRAVRAQAELENFRKRVYREMEEERKYASLPLLRSLLPVMDNLDRAMESAEKNLDVQGLLEGVRLVAKQFRSVLQQH 140          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A7X7KIG0_9BACT (Protein GrpE n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7KIG0_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 7.180e-11
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
Query:   40 YAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            YA +PL++D+LPV+DNIDRAI AAE+N ++A LLEG K+V   L  VL +H
Sbjct:   96 YANLPLLKDILPVIDNIDRAIEAAEKNADAASLLEGFKLVRQQLEDVLRRH 146          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A1G3A728_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3A728_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 1.050e-10
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   40 YAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            YA +PL+R+LLPV DNI RAI AAE   E+A LLEG KMV G L SV ++H
Sbjct:   58 YANVPLIRELLPVWDNIGRAIEAAENTHETASLLEGFKMVAGQLESVFQRH 108          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A518ATJ8_9BACT (Protein GrpE n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518ATJ8_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 1.140e-10
Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 0
Query:    1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            D +   AE A  K+ +LR Q                   YAG+ LMRD+LPVLDN+DRAI AA +  E A LLEG K+V   L + L++H
Sbjct:   25 DTEELEAELATEKDRSLRLQAELQNLRARQARELADARKYAGIELMRDILPVLDNVDRAIEAAGEGAEVASLLEGFKLVRQQLLTALDQH 114          
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A2E3RIZ5_9PLAN (Protein GrpE n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3RIZ5_9PLAN)

HSP 1 Score: 63.9 bits (154), Expect = 1.700e-10
Identity = 38/90 (42.22%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 90
            + +R   E  +  N ALRAQ                   YA MPL+R+LLP+LDNI RAI AAE+N  +  LLEG K+V   L+S+L +H
Sbjct:   45 EAERRQLELLDANNRALRAQADLENYRKRVQREQQQESRYALMPLLRELLPLLDNIQRAIEAAEKNEGTDPLLEGFKLVAQQLQSILMQH 134          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3E0NCR7_9BACT7.260e-1347.62Protein GrpE n=1 Tax=Planctomycetes bacterium TaxI... [more]
A0A847GMI9_9BACT2.540e-1244.32Protein GrpE n=1 Tax=Candidatus Anammoximicrobium ... [more]
A0A1G2Z8F3_9BACT2.830e-1246.43Protein GrpE n=1 Tax=Planctomycetes bacterium RBG_... [more]
A0A7V4HU67_9BACT1.470e-1142.22Protein GrpE n=1 Tax=Planctomycetes bacterium TaxI... [more]
A0A1Z8NCC2_9PLAN3.290e-1143.33Protein GrpE n=1 Tax=Planctomycetaceae bacterium T... [more]
A0A5Q4GY79_9PLAN5.360e-1141.67Protein GrpE n=1 Tax=Planctomycetaceae bacterium T... [more]
A0A7X7KIG0_9BACT7.180e-1158.82Protein GrpE n=1 Tax=Pirellulaceae bacterium TaxID... [more]
A0A1G3A728_9BACT1.050e-1062.75Protein GrpE n=1 Tax=Planctomycetes bacterium RBG_... [more]
A0A518ATJ8_9BACT1.140e-1042.22Protein GrpE n=1 Tax=Aeoliella mucimassa TaxID=252... [more]
A0A2E3RIZ5_9PLAN1.700e-1042.22Protein GrpE n=1 Tax=Planctomycetaceae bacterium T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..36
NoneNo IPR availablePANTHERPTHR21237:SF23GRPE PROTEIN HOMOLOG, MITOCHONDRIALcoord: 3..90
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 17..33
score: 50.18
coord: 45..60
score: 47.27
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 4..90
e-value: 1.4E-19
score: 70.3
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 3..90
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 1..90
e-value: 6.6E-25
score: 88.8
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 3..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119182contigM-pyrifera_M_contig119182:3..272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119182.3951.1mRNA_M-pyrifera_M_contig119182.3951.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119182 3..272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119182.3951.1 ID=prot_M-pyrifera_M_contig119182.3951.1|Name=mRNA_M-pyrifera_M_contig119182.3951.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
DLQRALAEAAEYKNFALRAQAELENYRKRASRELQDERRYAGMPLMRDLL
PVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil