mRNA_M-pyrifera_M_contig119182.3951.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A3E0NCR7_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0NCR7_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 7.260e-13 Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 19 AEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
AE AE K +R Q YA +PL+ DLLPV DNI RAI AAE++ AGLLEG +MV L SVLEKH
Sbjct: 47 AELAEAKQRLVRGQADLDNFRKRAARELESERRYAALPLLADLLPVADNIQRAIAAAEESEHEAGLLEGFRMVADQLTSVLEKH 130
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A847GMI9_9BACT (Protein GrpE n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GMI9_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 2.540e-12 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 7 QRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
Q+ ++ AE ++ ALRA YA +PL+RDLLPV+DN++RAI +A+Q+ SAGLLEGVKMV L +VL++H
Sbjct: 69 QQLPSQLAEAEDRALRAYAELENYRKRANRLLQEEVKYAPLPLLRDLLPVVDNLERAIQSADQSGGSAGLLEGVKMVAQQLLAVLDQH 156
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A1G2Z8F3_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2Z8F3_9BACT) HSP 1 Score: 68.9 bits (167), Expect = 2.830e-12 Identity = 39/84 (46.43%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 19 AEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
AE K+ LR Q YA +PL+RDLLPVLDN++RAI AAE+ ++A LL GVKMV G L VLE+H
Sbjct: 49 AELEAAKDRELRTQAELENYRKRVARQMEEERRYADLPLLRDLLPVLDNMERAIEAAEKTHDTASLLAGVKMVAGQLEEVLERH 132
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A7V4HU67_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HU67_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 1.470e-11 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
++ R AE + K+ ALR YA +PL+RDLLPVLDN+ RA+ A+E+N + AGLLEGVKMV +VL +H
Sbjct: 29 EVARLKAELEDVKDRALRGWAELENYRKRSARQMEEERRYAALPLLRDLLPVLDNMKRAVDASEKNHDLAGLLEGVKMVVQQFETVLARH 118
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A1Z8NCC2_9PLAN (Protein GrpE n=1 Tax=Planctomycetaceae bacterium TMED10 TaxID=1986833 RepID=A0A1Z8NCC2_9PLAN) HSP 1 Score: 65.9 bits (159), Expect = 3.290e-11 Identity = 39/90 (43.33%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
D +R E + N ALRAQ YA MPL+RDLLP+LDNI RAI AAE++ + LLEG K+V L+S+L +H
Sbjct: 47 DAERRQLELLDANNRALRAQADLDNYRKRVQREQQQESRYALMPLLRDLLPLLDNIQRAIEAAEKHQGTESLLEGFKLVAQQLQSILIQH 136
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A5Q4GY79_9PLAN (Protein GrpE n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GY79_9PLAN) HSP 1 Score: 65.5 bits (158), Expect = 5.360e-11 Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 19 AEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
A+ A + A+RAQ YA +PL+R LLPV+DN+DRA+ +AE+N + GLLEGV++V RSVL++H
Sbjct: 57 ADLAAANDRAVRAQAELENFRKRVYREMEEERKYASLPLLRSLLPVMDNLDRAMESAEKNLDVQGLLEGVRLVAKQFRSVLQQH 140
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A7X7KIG0_9BACT (Protein GrpE n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7KIG0_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 7.180e-11 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 118 YAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
YA +PL++D+LPV+DNIDRAI AAE+N ++A LLEG K+V L VL +H
Sbjct: 96 YANLPLLKDILPVIDNIDRAIEAAEKNADAASLLEGFKLVRQQLEDVLRRH 146
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A1G3A728_9BACT (Protein GrpE n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3A728_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 1.050e-10 Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 118 YAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
YA +PL+R+LLPV DNI RAI AAE E+A LLEG KMV G L SV ++H
Sbjct: 58 YANVPLIRELLPVWDNIGRAIEAAENTHETASLLEGFKMVAGQLESVFQRH 108
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A518ATJ8_9BACT (Protein GrpE n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518ATJ8_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 1.140e-10 Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
D + AE A K+ +LR Q YAG+ LMRD+LPVLDN+DRAI AA + E A LLEG K+V L + L++H
Sbjct: 25 DTEELEAELATEKDRSLRLQAELQNLRARQARELADARKYAGIELMRDILPVLDNVDRAIEAAGEGAEVASLLEGFKLVRQQLLTALDQH 114
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Match: A0A2E3RIZ5_9PLAN (Protein GrpE n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3RIZ5_9PLAN) HSP 1 Score: 63.9 bits (154), Expect = 1.700e-10 Identity = 38/90 (42.22%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 1 DLQRALAEAAEYKNFALRAQXXXXXXXXXXXXXXXXXXXYAGMPLMRDLLPVLDNIDRAILAAEQNPESAGLLEGVKMVGGLLRSVLEKH 270
+ +R E + N ALRAQ YA MPL+R+LLP+LDNI RAI AAE+N + LLEG K+V L+S+L +H
Sbjct: 45 EAERRQLELLDANNRALRAQADLENYRKRVQREQQQESRYALMPLLRELLPLLDNIQRAIEAAEKNEGTDPLLEGFKLVAQQLQSILMQH 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119182.3951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119182.3951.1 >prot_M-pyrifera_M_contig119182.3951.1 ID=prot_M-pyrifera_M_contig119182.3951.1|Name=mRNA_M-pyrifera_M_contig119182.3951.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp DLQRALAEAAEYKNFALRAQAELENYRKRASRELQDERRYAGMPLMRDLLback to top mRNA from alignment at M-pyrifera_M_contig119182:3..272- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119182.3951.1 ID=mRNA_M-pyrifera_M_contig119182.3951.1|Name=mRNA_M-pyrifera_M_contig119182.3951.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig119182:3..272- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119182:3..272- >mRNA_M-pyrifera_M_contig119182.3951.1 ID=mRNA_M-pyrifera_M_contig119182.3951.1|Name=mRNA_M-pyrifera_M_contig119182.3951.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119182:3..272- (Macrocystis pyrifera P11B4 male)back to top |