prot_M-pyrifera_M_contig119179.3950.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119179.3950.1
Unique Nameprot_M-pyrifera_M_contig119179.3950.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length181
Homology
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A7K1ZE95_9ACTN (Tyrosine recombinase XerC n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZE95_9ACTN)

HSP 1 Score: 269 bits (687), Expect = 4.420e-88
Identity = 139/185 (75.14%), Postives = 154/185 (83.24%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGPRSED----RPEIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            SAALSAPRG ATLP VLNA ELD L EG   +       PEIELRDRA+VELLYGSGLRVSELC LR  DL+GPS +I VWGKG KQRRVPISE AA AL+ WI  GRP +VT  +PDD+VFLNRRG+ L+PRDVRRLLDRR+ +PTHPHALRHT+ATHLLDGGADLR+VQELLGHADL+TTQIY
Sbjct:   93 SAALSAPRGEATLPTVLNAQELDGLFEGSAAATAVAAAEPEIELRDRAIVELLYGSGLRVSELCGLRHEDLTGPSDSIVVWGKGSKQRRVPISEPAAVALSAWIQRGRPEMVTDVSPDDRVFLNRRGKALSPRDVRRLLDRRSLSPTHPHALRHTYATHLLDGGADLRSVQELLGHADLATTQIY 277          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A2E8L7F1_9ACTN (Recombinase XerC n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L7F1_9ACTN)

HSP 1 Score: 249 bits (637), Expect = 1.400e-81
Identity = 126/182 (69.23%), Postives = 148/182 (81.32%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGPRSEDRP-EIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            SAAL+AP+GTA LP VL+AAE+D L++G  R+   P E++LRDRAV+ELLYGSG+RVSELC L   D+   SG + VWGKG KQR VP+SEAA  A++ WI EGRP +VTG T    +FLNR GR LTPRDVRR+LDRRA +PTHPHALRHTFATHLLDGGADLR VQE+LGHADL+TTQIY
Sbjct:   20 SAALTAPKGTANLPTVLSAAEIDGLLDGSARAAGEPGEVDLRDRAVIELLYGSGIRVSELCGLELDDIDN-SGVLRVWGKGSKQRIVPVSEAATEAVSRWIREGRPSMVTGGTAKPSLFLNRAGRSLTPRDVRRILDRRAVSPTHPHALRHTFATHLLDGGADLRVVQEMLGHADLTTTQIY 200          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A3C0HP68_9ACTN (Tyrosine recombinase XerC n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HP68_9ACTN)

HSP 1 Score: 249 bits (636), Expect = 1.480e-79
Identity = 126/182 (69.23%), Postives = 148/182 (81.32%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGPRSEDRP-EIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            SAAL+AP+GTA LP VL+AAE+D L++G  R+   P E++LRDRAV+ELLYGSG+RVSELC L   D+   SG + VWGKG KQR VP+SEAA  A++ WI +GRP LVT D     +FLNR GR LTPRDVRR+LDRRA +PTHPHALRHTFATHLLDGGADLRAVQE+LGHADL+TTQIY
Sbjct:  156 SAALTAPKGTANLPTVLSAAEIDGLLDGSARAAGEPGEVDLRDRAVIELLYGSGIRVSELCGLELDDIDN-SGVLRVWGKGSKQRIVPVSEAATEAVSRWIRDGRPSLVTADAATPSLFLNRAGRSLTPRDVRRILDRRAVSPTHPHALRHTFATHLLDGGADLRAVQEMLGHADLATTQIY 336          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A2E0T3D5_9ACTN (Tyrosine recombinase XerC n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T3D5_9ACTN)

HSP 1 Score: 241 bits (616), Expect = 1.600e-76
Identity = 123/182 (67.58%), Postives = 143/182 (78.57%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGPRSEDRP-EIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            SAAL+AP+GTA LP VL AAE+D L+EG  R+   P E++LRDRAV+ELLYG G+RV ELC L   D+    G + VWGKG KQR VP+SEAA  A++ WI EGRP + T DT    +FLNR GR LTPRDVRR+LDRRA +PTHPHALRHTFATHLLDGGA LRAVQE+LGHADL+TTQIY
Sbjct:  157 SAALTAPKGTANLPTVLTAAEIDGLLEGSARAAGEPGEVDLRDRAVIELLYGXGIRVXELCGLELDDIDNX-GVLRVWGKGSKQRIVPVSEAATXAVSXWIREGRPSMXTSDTAXPSLFLNRAGRSLTPRDVRRILDRRAVSPTHPHALRHTFATHLLDGGAXLRAVQEMLGHADLATTQIY 337          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A2D8LT72_9ACTN (Recombinase XerC (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LT72_9ACTN)

HSP 1 Score: 239 bits (609), Expect = 2.630e-76
Identity = 119/182 (65.38%), Postives = 145/182 (79.67%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGPRSEDRP-EIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            SAAL+AP+GTA LP VL AAE+D L+EG  R+   P E++LRDRAVVELLYGSG+RVSELC L   D+   SG + VWGKG KQR VP+SEAA  A+++WI EGRP +VT DT    +FLNR GR LTPRDVRR+LDRRA +PTHPHALRHTFATH+L+ GADL  ++E+LGHA+LS T++Y
Sbjct:   93 SAALTAPKGTANLPTVLTAAEIDGLLEGSARAAGEPGEVDLRDRAVVELLYGSGIRVSELCGLELDDIDN-SGVLRVWGKGSKQRIVPVSEAATEAVSQWIREGRPSMVTSDTAKPSLFLNRAGRSLTPRDVRRILDRRAVSPTHPHALRHTFATHMLNNGADLNTIKEILGHANLSATEVY 273          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: UPI001AA08BD8 (tyrosine-type recombinase/integrase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA08BD8)

HSP 1 Score: 234 bits (597), Expect = 1.960e-74
Identity = 123/183 (67.21%), Postives = 140/183 (76.50%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGPRS--EDRPEIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            +A LS+P G   LPRVL   EL  L++  P S   D P I LRD AV+ELLYGSGLRV+ELC LR  DL   + T+ VWGKG +QR+VP+SE A+AA+  W+  GR  L+T DTP D VFLNRRGR LTPRDVRR+LDRRA +PTHPHALRHTFATHLLDGGADLRAVQELLGHADL TTQ Y
Sbjct:   95 AAGLSSPAGEGRLPRVLRDEELRALLDDPPASTSSDEPAIRLRDDAVLELLYGSGLRVAELCGLRPDDLDLLNRTVRVWGKGSRQRQVPLSEPASAAIDAWLRRGRDQLITTDTPVDAVFLNRRGRRLTPRDVRRILDRRALSPTHPHALRHTFATHLLDGGADLRAVQELLGHADLGTTQHY 277          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A3M2H936_ACTSX (Recombinase XerC (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H936_ACTSX)

HSP 1 Score: 232 bits (592), Expect = 2.180e-74
Identity = 122/180 (67.78%), Postives = 143/180 (79.44%), Query Frame = 0
Query:    4 LSAPRGTATLPRVLNAAELDRLVEGGPRSEDRPE-IELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGD-TPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            L APRG + LPR+L AAEL+ L++GG R+    + +ELRDRAVVELLYG GLRVSELC L    +   +G ++VWGKG KQRRVP+ E AA A++ W+AEGRP LV  D    D VF+NRRGR L  RDVRR+LDRRAP+PTHPHALRHT+ATHLLDGGADLRAVQELLGHADL+TTQIY
Sbjct:   46 LHAPRGESRLPRILQAAELEVLLDGGRRAAAGDDAVELRDRAVVELLYGCGLRVSELCGLTLDRVDLDAGMLTVWGKGAKQRRVPLGEPAADAVSLWLAEGRPRLVVDDDAAGDHVFVNRRGRPLGDRDVRRILDRRAPSPTHPHALRHTYATHLLDGGADLRAVQELLGHADLATTQIY 225          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A6I2XBP9_9ACTN (Tyrosine recombinase XerC n=2 Tax=root TaxID=1 RepID=A0A6I2XBP9_9ACTN)

HSP 1 Score: 230 bits (586), Expect = 2.460e-72
Identity = 123/183 (67.21%), Postives = 137/183 (74.86%), Query Frame = 0
Query:    1 SAALSAPRGTATLPRVLNAAELDRLVEGGP--RSEDRPEIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            SA LSAP G+  LPRVL   EL  +++  P   + D P I  RD AV+ELLYGSGLRVSELC LR  DL      + VWGKG KQR VP+SE A  AL +W+  GR V+ T D+P D VFLN+RGR L PRDVRRLLDRRAP+PTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQ Y
Sbjct:  128 SAGLSAPGGSGRLPRVLRDDELIAVLDDPPGTTANDTPAIRSRDDAVLELLYGSGLRVSELCGLRPEDLDIARRRVVVWGKGSKQRVVPLSEPACHALRQWLDHGRRVIATADSPADAVFLNQRGRQLGPRDVRRLLDRRAPSPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQHY 310          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A538JA34_9ACTN (Tyrosine recombinase XerC n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JA34_9ACTN)

HSP 1 Score: 224 bits (572), Expect = 1.120e-70
Identity = 121/181 (66.85%), Postives = 136/181 (75.14%), Query Frame = 0
Query:    4 LSAPRGTATLPRVLNAAELDRLVEG-GPRSEDRPE--IELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            LSAPRG A LPRVL  AEL+ ++E  GP   D     + LRD AVVELLYGSGLRV+ELC LR  DL      ++VWGKGDKQR VP+SE +  A+  W+A GR  LV   +P D  FLNRRG  LTPRDVRR+LDRRA  PTHPHALRHTFATHLLDGGADLRAVQELLGHADL+TTQ+Y
Sbjct:   95 LSAPRGEARLPRVLRDAELETVLEAPGPPPTDELAWAVHLRDNAVVELLYGSGLRVAELCGLRPPDLQLRERRVTVWGKGDKQRWVPMSEPSVEAVRAWLAHGRAHLVGERSPADAAFLNRRGGRLTPRDVRRILDRRASDPTHPHALRHTFATHLLDGGADLRAVQELLGHADLATTQLY 275          
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Match: A0A6B0WHI8_9ACTN (Tyrosine recombinase XerC n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WHI8_9ACTN)

HSP 1 Score: 224 bits (572), Expect = 1.480e-70
Identity = 112/178 (62.92%), Postives = 134/178 (75.28%), Query Frame = 0
Query:    4 LSAPRGTATLPRVLNAAELDRLVEGGPRSEDRPEIELRDRAVVELLYGSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWIAEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRHTFATHLLDGGADLRAVQELLGHADLSTTQIY 181
            L+ PRG + LP+VL   ++D L+E   R+ D    + RD A+VELLYGSGLRVSELC LR  DL      + VWGKG KQR VP+S+ AAAAL  W+ + R   V  DTP D VFLN+RGR +TPRDVRR++DRR+  PTHPHALRHTFATHLLDGGADLRAVQELLGHAD+++TQIY
Sbjct:  107 LAPPRGPSKLPQVLKDDQIDTLIEKPARAGDDEARDARDLAIVELLYGSGLRVSELCGLRHEDLDLAQAQVRVWGKGSKQRLVPLSDPAAAALRAWLEDHRASFVANDTPADPVFLNQRGRAMTPRDVRRVIDRRSVVPTHPHALRHTFATHLLDGGADLRAVQELLGHADIASTQIY 284          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119179.3950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1ZE95_9ACTN4.420e-8875.14Tyrosine recombinase XerC n=2 Tax=Acidimicrobiacea... [more]
A0A2E8L7F1_9ACTN1.400e-8169.23Recombinase XerC n=1 Tax=Acidimicrobiaceae bacteri... [more]
A0A3C0HP68_9ACTN1.480e-7969.23Tyrosine recombinase XerC n=2 Tax=Acidimicrobiacea... [more]
A0A2E0T3D5_9ACTN1.600e-7667.58Tyrosine recombinase XerC n=5 Tax=Acidimicrobiacea... [more]
A0A2D8LT72_9ACTN2.630e-7665.38Recombinase XerC (Fragment) n=1 Tax=Acidimicrobiac... [more]
UPI001AA08BD81.960e-7467.21tyrosine-type recombinase/integrase n=1 Tax=Rhabdo... [more]
A0A3M2H936_ACTSX2.180e-7467.78Recombinase XerC (Fragment) n=1 Tax=Actinomyces sp... [more]
A0A6I2XBP9_9ACTN2.460e-7267.21Tyrosine recombinase XerC n=2 Tax=root TaxID=1 Rep... [more]
A0A538JA34_9ACTN1.120e-7066.85Tyrosine recombinase XerC n=1 Tax=Actinomycetia ba... [more]
A0A6B0WHI8_9ACTN1.480e-7062.92Tyrosine recombinase XerC n=3 Tax=Acidimicrobiacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 16..181
e-value: 1.8E-39
score: 135.3
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 15..181
e-value: 1.9E-52
score: 179.4
NoneNo IPR availablePANTHERPTHR30349PHAGE INTEGRASE-RELATEDcoord: 3..181
NoneNo IPR availablePANTHERPTHR30349:SF66coord: 3..181
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 13..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119179contigM-pyrifera_M_contig119179:3..545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119179.3950.1mRNA_M-pyrifera_M_contig119179.3950.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119179 3..545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119179.3950.1 ID=prot_M-pyrifera_M_contig119179.3950.1|Name=mRNA_M-pyrifera_M_contig119179.3950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
SAALSAPRGTATLPRVLNAAELDRLVEGGPRSEDRPEIELRDRAVVELLY
GSGLRVSELCALRRSDLSGPSGTISVWGKGDKQRRVPISEAAAAALAEWI
AEGRPVLVTGDTPDDQVFLNRRGRGLTPRDVRRLLDRRAPTPTHPHALRH
TFATHLLDGGADLRAVQELLGHADLSTTQIY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002104Integrase_catalytic
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz