prot_M-pyrifera_M_contig119126.3932.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119126.3932.1
Unique Nameprot_M-pyrifera_M_contig119126.3932.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
BLAST of mRNA_M-pyrifera_M_contig119126.3932.1 vs. uniprot
Match: A0A7X5WU23_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WU23_9ACTN)

HSP 1 Score: 94.4 bits (233), Expect = 2.580e-21
Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 0
Query:   10 PYPGYPIVAVYDPVVDPPGPLVTTPTVARFALDSIDFARPEIITSPADTHVVGVPSWFAVASELDYEPASAQAGPVWATVRPVFRDVVWALGDETQLVC 108
            P PGYP+ AVY    + PG +V+T   ARFALDSI   RP +  +P    VVGV +   V S LDY PASA+AGPVWATV PVF  V W  G+   +VC
Sbjct:  102 PLPGYPVPAVYGER-ELPGAVVSTGEAARFALDSIGLQRPAVRLTPPGRQVVGVHTDLEVVSRLDYPPASAEAGPVWATVVPVFGSVEWQPGNGDTVVC 199          
BLAST of mRNA_M-pyrifera_M_contig119126.3932.1 vs. uniprot
Match: A0A3C0HSN1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HSN1_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 4.920e-14
Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    1 CWYS-SPWVDPYPGYPIVAVYDPVVDP--PGP-LVTTPTVARFALDSIDFARPEIITSPADTHVVGVPSWFAVASELDYEPASAQAGPVWATVRPVFRDVVWALGDETQ-LVC 108
            CW + SP +   PG+P    +DP   P  P P +V  P +  +A  ++ F +     SP     VGVP+W AV SE +Y P +A AGP+WATVRP FR+V W +GD +  +VC
Sbjct:   65 CWVAGSPTL--LPGFP--RFFDPPQPPFPPAPDVVEEPRLEIYAHRTLQFEQAVAEMSPPVDQFVGVPTWLAVTSEREYAPITANAGPLWATVRPEFRNVRWDMGDGSPPIVC 173          
BLAST of mRNA_M-pyrifera_M_contig119126.3932.1 vs. uniprot
Match: A0A2D8GF50_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GF50_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 1.060e-13
Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 0
Query:    1 CWYS-SPWVDPYPGYPIVAVYDPVVDP--PGP-LVTTPTVARFALDSIDFARPEIITSPADTHVVGVPSWFAVASELDYEPASAQAGPVWATVRPVFRDVVWALGDETQ-LVC 108
            CW + SP +   PG+P    +DP   P  P P +V  P +  +A  +++F +     SP     VGVP+W AV SE +Y P +A AGP+WATVRP FR+V W +GD +  +VC
Sbjct:  110 CWVAGSPTL--LPGFP--RFFDPPQPPFPPAPDVVEEPRLEIYAHRALEFEQAIAGLSPPVDQFVGVPTWLAVTSEREYAPITANAGPLWATVRPEFRNVRWDMGDGSPPIVC 218          
BLAST of mRNA_M-pyrifera_M_contig119126.3932.1 vs. uniprot
Match: A0A2D8LTE5_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LTE5_9ACTN)

HSP 1 Score: 69.7 bits (169), Expect = 8.240e-13
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   43 SIDFARPEIITSPADTHVVGVPSWFAVASELDYEPASAQAGPVWATVRPVFRDVVWALGDETQ-LVC 108
            +++F R     SP     VGVP+W AV SE +Y P +A AGP+WATVRP FR+V W +GD +  +VC
Sbjct:    1 ALEFERAITGLSPPVDQFVGVPTWLAVTSEREYAPITANAGPLWATVRPEFRNVRWDMGDGSPPIVC 67          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119126.3932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7X5WU23_9ACTN2.580e-2152.53Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A3C0HSN1_9ACTN4.920e-1441.59Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A2D8GF50_9ACTN1.060e-1341.59Uncharacterized protein n=3 Tax=Acidimicrobiaceae ... [more]
A0A2D8LTE5_9ACTN8.240e-1349.25Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119126contigM-pyrifera_M_contig119126:27..353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119126.3932.1mRNA_M-pyrifera_M_contig119126.3932.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119126 27..353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119126.3932.1 ID=prot_M-pyrifera_M_contig119126.3932.1|Name=mRNA_M-pyrifera_M_contig119126.3932.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
CWYSSPWVDPYPGYPIVAVYDPVVDPPGPLVTTPTVARFALDSIDFARPE
IITSPADTHVVGVPSWFAVASELDYEPASAQAGPVWATVRPVFRDVVWAL
GDETQLVCT
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