prot_M-pyrifera_M_contig119124.3931.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig119124.3931.1
Unique Name	prot_M-pyrifera_M_contig119124.3931.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	181

Homology

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BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A2E7KKT3_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=21 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E7KKT3_9PLAN)

HSP 1 Score: 350 bits (898), Expect = 1.440e-117
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG
Sbjct:   78 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 258

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3D3W2Z6_9PLAN (Sigma-54-dependent Fis family transcriptional regulator (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D3W2Z6_9PLAN)

HSP 1 Score: 298 bits (764), Expect = 2.550e-99
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR AKEELP+AEVIVLTGHGSI+SAVTAMQ GAYTYLTKPLDI+ELR+AVEKAS R+RL+RRNAEL R LDE+FGFEGVIG +PQMH IVE LKNV+ T+ TVLI+GE+GTGKELVARA+HQNS RK+KPFVPLNISALPDSILESELFGHE GAFTGA G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LRIAKEELPEAEVIVLTGHGSIHSAVTAMQHGAYTYLTKPLDITELRSAVEKASARLRLIRRNAELRRSLDERFGFEGVIGTSPQMHAIVEILKNVSPTDITVLIQGENGTGKELVARALHQNSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAQGRRIGKFEHANGGTLFLDEVG 258

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3B9D1B9_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D1B9_9PLAN)

HSP 1 Score: 303 bits (776), Expect = 2.960e-99
Identity = 155/181 (85.64%), Postives = 168/181 (92.82%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR  KEELPDAEVIVLTGHGSI SAVTAMQ GAYTYLTKPLDI ELR+AVEKAS R+RL+RRNAEL R L+E+FGFEGVIGN+PQMH+IVE LKNV+ T+STVLI+GE+GTGKELVA+AIHQNS RKSKPFVPLNISALPDS LESELFGHE GAFTGAVG+RIGKFEHANGGTLFLDEVG
Sbjct:   76 LRQTKEELPDAEVIVLTGHGSITSAVTAMQHGAYTYLTKPLDIGELRSAVEKASARLRLIRRNAELRRSLEERFGFEGVIGNSPQMHRIVEILKNVSPTDSTVLIQGENGTGKELVAKAIHQNSPRKSKPFVPLNISALPDSTLESELFGHEAGAFTGAVGRRIGKFEHANGGTLFLDEVG 256

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A1P8WDE4_9PLAN (Transcriptional regulatory protein ZraR n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WDE4_9PLAN)

HSP 1 Score: 301 bits (770), Expect = 2.680e-98
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   KEELPDAEVIVLTGHGSI SAVTAMQ GAYTYLTKPLDISELR+AVEKAS R+RL+RRNAEL R L+E+FGFEGVIGN+ QMH+I+E LKNV+ T+ST+LI+GE+GTGKELVA+AIHQNS RKSKPFVPLNISALPDSILESELFGHEQGAFTGA G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LTQVKEELPDAEVIVLTGHGSITSAVTAMQHGAYTYLTKPLDISELRSAVEKASARLRLIRRNAELRRSLEERFGFEGVIGNSSQMHRIIEILKNVSPTDSTILIQGENGTGKELVAKAIHQNSHRKSKPFVPLNISALPDSILESELFGHEQGAFTGASGRRIGKFEHANGGTLFLDEVG 258

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A352KYQ3_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A352KYQ3_9PLAN)

HSP 1 Score: 298 bits (762), Expect = 4.320e-97
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR AKEELP+AEVIVLTGHGSI+SAVTAMQ GAYTYLTKPLDI+ELR+AVEKAS R+RL+RRNAEL R LDE+FGFEGVIG +PQMH IVE LK+VA T+ TVLI+GE+GTGKELVARA+HQNS RK+KPFVPLNISALPDSILESELFGHE GAFTGA G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LRIAKEELPEAEVIVLTGHGSIHSAVTAMQHGAYTYLTKPLDITELRSAVEKASARLRLIRRNAELRRSLDERFGFEGVIGTSPQMHAIVEILKHVAPTDITVLIQGENGTGKELVARALHQNSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAQGRRIGKFEHANGGTLFLDEVG 258

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A356ACU9_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A356ACU9_9PLAN)

HSP 1 Score: 297 bits (761), Expect = 5.940e-97
Identity = 151/181 (83.43%), Postives = 169/181 (93.37%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   K+ELPDAEVI+LTGHG+INSAV AMQ GAYTY+TKPLDI+ELR AVEKA+TRVRL+RRNAEL+RRLDEKFGFEGVIGN+P MHK++EKLKNVA T++TVLI+GESGTGKELVARAIHQNS+RK+KPFVPLNISALP+SILESELFGHE GAFTGA  KRIGKFE+A GGTLFLDEVG
Sbjct:   75 LERTKKELPDAEVILLTGHGTINSAVAAMQGGAYTYMTKPLDINELRTAVEKAATRVRLIRRNAELNRRLDEKFGFEGVIGNSPAMHKLIEKLKNVAPTDATVLIQGESGTGKELVARAIHQNSDRKNKPFVPLNISALPESILESELFGHEPGAFTGASTKRIGKFEYAIGGTLFLDEVG 255

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: UPI001EE8A1AB (sigma-54 dependent transcriptional regulator n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE8A1AB)

HSP 1 Score: 297 bits (761), Expect = 5.940e-97
Identity = 152/181 (83.98%), Postives = 167/181 (92.27%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   K ELPDAEVI+LTGHG+INSAV AMQ GAYTYLTKPLDI ELR AVEKA+TRVRL+RRNAEL+RRLDEKFGFEGVIGN+P MHK++EKLKNVA T++TVLI+GESGTGKELVARAIHQNS+RK+KPFVPLNISALP+SILESELFGHE GAFTGA  KRIGKFE+A GGTLFLDEVG
Sbjct:   75 LERTKNELPDAEVILLTGHGTINSAVAAMQGGAYTYLTKPLDIHELRKAVEKAATRVRLIRRNAELNRRLDEKFGFEGVIGNSPAMHKVIEKLKNVAPTDATVLIQGESGTGKELVARAIHQNSDRKNKPFVPLNISALPESILESELFGHEPGAFTGASTKRIGKFEYAIGGTLFLDEVG 255

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3L7UTQ4_9BACT (Sigma-54-dependent Fis family transcriptional regulator (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7UTQ4_9BACT)

HSP 1 Score: 296 bits (759), Expect = 8.640e-97
Identity = 150/181 (82.87%), Postives = 167/181 (92.27%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR  KEELP+AEVIVLTGHGSI SAVTAMQ GAYTYLTKPLDI ELR+AVEKAS R+RL+RRNAEL + LDE+FGFEGV+GN+PQMH I++ LK+VA T+STVLI GE+GTGKELVARA+HQNS RK+KPFVPLNISALPDSILESELFGHE GAFTGA+G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LRLTKEELPEAEVIVLTGHGSIASAVTAMQHGAYTYLTKPLDIGELRSAVEKASARLRLIRRNAELRQSLDERFGFEGVVGNSPQMHSIIDILKSVAPTDSTVLIHGENGTGKELVARALHQNSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAMGRRIGKFEHANGGTLFLDEVG 258

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3L7Q1Z2_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7Q1Z2_9BACT)

HSP 1 Score: 296 bits (758), Expect = 1.120e-96
Identity = 149/181 (82.32%), Postives = 170/181 (93.92%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR AKEELP+AEVIVLTGH SINSAVTAMQ GAYTYLTKPLDI ELR++VEKA+TR+RL+RRNA L+RRLDEKFGFEGVIGN+P M++++E+LK +A T +TVLI GESGTGKELVARA+HQNS+RK+KPFVPLNISALP+SILESELFGHEQGAFTGAV KR+GKFE+ANGGTLFLDEVG
Sbjct:   65 LRKAKEELPEAEVIVLTGHSSINSAVTAMQAGAYTYLTKPLDIQELRHSVEKAATRIRLIRRNAALNRRLDEKFGFEGVIGNSPAMNRVIEQLKALAPTEATVLILGESGTGKELVARALHQNSQRKTKPFVPLNISALPESILESELFGHEQGAFTGAVTKRVGKFEYANGGTLFLDEVG 245

[Close]

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: F0SH25_RUBBR (Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Rubinisphaera TaxID=1649490 RepID=F0SH25_RUBBR)

HSP 1 Score: 295 bits (754), Expect = 6.960e-96
Identity = 150/181 (82.87%), Postives = 168/181 (92.82%), Query Frame = 0

Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   K ELPDAEVI+LTGHG+INSAV AMQ GAYTYLTKPLDI+ELR +VEKA++RVRL+RRNAEL+RRLDEKFGFEGVIGN+P MH+I+EKLKNVA T++TVLI+GESGTGKELVARAIHQNS+RK+K FVPLNISALP+SILESELFGHE GAFTGAV KRIGKFEHA GGTLFLDE+G
Sbjct:   77 LERTKVELPDAEVILLTGHGTINSAVAAMQGGAYTYLTKPLDINELRTSVEKAASRVRLIRRNAELNRRLDEKFGFEGVIGNSPAMHRIIEKLKNVAPTDATVLIQGESGTGKELVARAIHQNSDRKNKNFVPLNISALPESILESELFGHEAGAFTGAVTKRIGKFEHAIGGTLFLDEIG 257

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2E7KKT3_9PLAN	1.440e-117	100.00	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A3D3W2Z6_9PLAN	2.550e-99	84.53	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A3B9D1B9_9PLAN	2.960e-99	85.64	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A1P8WDE4_9PLAN	2.680e-98	84.53	Transcriptional regulatory protein ZraR n=1 Tax=Fu...	[more]
A0A352KYQ3_9PLAN	4.320e-97	84.53	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A356ACU9_9PLAN	5.940e-97	83.43	Sigma-54-dependent Fis family transcriptional regu...	[more]
UPI001EE8A1AB	5.940e-97	83.98	sigma-54 dependent transcriptional regulator n=1 T...	[more]
A0A3L7UTQ4_9BACT	8.640e-97	82.87	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A3L7Q1Z2_9BACT	1.120e-96	82.32	Sigma-54-dependent Fis family transcriptional regu...	[more]
F0SH25_RUBBR	6.960e-96	82.87	Two component, sigma54 specific, transcriptional r...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	GENE3D	3.40.50.300		coord: 65..181 e-value: 5.8E-37 score: 129.0
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..58 e-value: 1.2E-12 score: 49.6
None	No IPR available	PANTHER	PTHR32071:SF57		coord: 11..181
None	No IPR available	PANTHER	PTHR32071	FAMILY NOT NAMED	coord: 11..181
IPR002078	RNA polymerase sigma factor 54 interaction domain	PFAM	PF00158	Sigma54_activat	coord: 79..181 e-value: 5.2E-42 score: 143.4
IPR002078	RNA polymerase sigma factor 54 interaction domain	PROSITE	PS50045	SIGMA54_INTERACT_4	coord: 79..181 score: 25.883
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 6..51 e-value: 9.4E-8 score: 32.2
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 1..54 score: 17.395
IPR025943	Sigma-54 interaction domain, ATP-binding site 2	PROSITE	PS00676	SIGMA54_INTERACT_2	coord: 165..180
IPR025662	Sigma-54 interaction domain, ATP-binding site 1	PROSITE	PS00675	SIGMA54_INTERACT_1	coord: 103..116
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 78..180
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 2..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig119124	contig	M-pyrifera_M_contig119124:3..545 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig119124.3931.1	mRNA_M-pyrifera_M_contig119124.3931.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig119124 3..545 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig119124.3931.1 ID=prot_M-pyrifera_M_contig119124.3931.1|Name=mRNA_M-pyrifera_M_contig119124.3931.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAV
EKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTN
STVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFG
HEQGAFTGAVGKRIGKFEHANGGTLFLDEVG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002078	Sigma_54_int
IPR001789	Sig_transdc_resp-reg_receiver
IPR025943	Sigma_54_int_dom_ATP-bd_2
IPR025662	Sigma_54_int_dom_ATP-bd_1
IPR027417	P-loop_NTPase
IPR011006	CheY-like_superfamily