mRNA_M-pyrifera_M_contig11911.3925.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: D7FNY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNY9_ECTSI) HSP 1 Score: 187 bits (475), Expect = 2.660e-58 Identity = 109/128 (85.16%), Postives = 118/128 (92.19%), Query Frame = 1
Query: 1 EIPADALPAGWSAGGAGARDPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDDQDSDDNDDDLM 384
++PADALPAGWS+GGAGA DPE+AQR+ XXXXXXXXX KQILDQIMT EAR+RLSNIAMVKPDKARRVEEMLIHAA SG L KVTED FIQML QVSSQMEKKTKVT+KRKTYFD+QDSDDNDDD+M
Sbjct: 5 QLPADALPAGWSSGGAGAGDPESAQRKXXXXXXXXXXRKQILDQIMTVEARLRLSNIAMVKPDKARRVEEMLIHAATSGKLGGKVTEDQFIQMLEQVSSQMEKKTKVTIKRKTYFDEQDSDDNDDDMM 132
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: A0A835Z9S3_9STRA (Double-stranded DNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S3_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.880e-27 Identity = 64/119 (53.78%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 19 LPAGWSAGGAGARDPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDDQDSDDNDD 375
LP G++AGG G DP+AA ++A + ILDQIM EAR RL+NIAMVK DKAR +E+MLI AAK G L KV+++ F+QML VS+QME+KTKVTM+R+ D D DD
Sbjct: 6 LPEGFTAGGGG-MDPQAAAQKAQQEAAMEDQRRSILDQIMMPEARERLNNIAMVKKDKARALEDMLISAAKQGKLGGKVSQEQFVQMLEGVSAQMERKTKVTMRRRRNIGDSDXXXXDD 123
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: W7U6K2_9STRA (Programmed cell death protein 5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6K2_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 6.540e-19 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 19 LPAGWSAGGAG-------ARDPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKK-TKVTMKRKTYFDDQDSDDNDDDLM 384
LP G++A GAG E + Q + +LDQI++ EA+ RL+ IA+V+ +K R V++MLI AA SG L KV+E+ I+ML QVSSQ++KK TKVT++R+ D +D DDNDDD++
Sbjct: 9 LPPGFTAAGAGMSGAGGRGMSTEEMEAQKAKHAEMEERRQFMLDQILSPEAKERLARIAIVRKEKVRGVQDMLIQAATSGRLRGKVSEEQLIEMLEQVSSQVDKKATKVTIQRRRCLD-EDEDDNDDDML 137
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: A0A484E5F5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5F5_BRELC) HSP 1 Score: 85.9 bits (211), Expect = 1.570e-18 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 121 ILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEK-KTKVTMKRKTYFDDQDSDDNDDDL 381
++ Q+M +AR RL+ IAMVKP+KAR +E+M+I A+ G L AK+ E+ I +L QV EK +TKVT+KR+TYF D+D D+DD+
Sbjct: 31 MIQQVMLPDARERLARIAMVKPEKARAIEDMVIQMAQRGQLAAKIDEEKLIDLLNQVGVNEEKQRTKVTIKRRTYFSDEDDGDDDDEF 118
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: F4PGL7_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PGL7_CAVFA) HSP 1 Score: 83.6 bits (205), Expect = 1.000e-17 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 58 DPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDD 351
DPEA QR + I+ QI+T +AR RLS IAMVKPDKAR++E+ML++AA++G L KV E I +L Q+S + KKT V MKR+T DD
Sbjct: 13 DPEAQQRAMEQKREQEERRQHIILQILTHDARERLSRIAMVKPDKARQIEDMLVNAAQTGRLSEKVDEQKLISLLEQISEKA-KKTTVIMKRRTIEDD 109
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: A0A1Y1IT43_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IT43_KLENI) HSP 1 Score: 83.2 bits (204), Expect = 2.330e-17 Identity = 41/79 (51.90%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 121 ILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDDQD 357
+L QIM+ EAR RL+ IA+VKPDKAR VE+++I A+ G + KVTED I +L Q++ Q + +TKVT++R++ FDD D
Sbjct: 51 MLAQIMSPEARARLARIALVKPDKARGVEDLVIRMAQMGQITEKVTEDRLISLLEQINEQQQTRTKVTIQRRSVFDDDD 129
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: UPI0014558623 (programmed cell death protein 5-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014558623) HSP 1 Score: 83.2 bits (204), Expect = 2.450e-17 Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 43 GAGARDPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDDQDSDDN 369
GAG +DP A ++Q IL Q++ AR RL++IA+VKPDKA+ VE MLI A++G LP +V+ED +L +VS Q ++KTK+ +R+ D DSD++
Sbjct: 23 GAGGQDPNAREKQQEAQKRQEEMMHSILTQVLDQNARARLNSIALVKPDKAKMVERMLIQMAQTGQLPGRVSEDQLKGLLAKVSVQTQRKTKINFERRRVMD-SDSDED 130
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: UPI000A3B5CB4 (programmed cell death protein 5 n=1 Tax=Columba livia TaxID=8932 RepID=UPI000A3B5CB4) HSP 1 Score: 81.6 bits (200), Expect = 7.290e-17 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 49 GARDPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDDQDSDD 366
G +DP + Q Q IL Q++ AR RLSN+A+VKPDKA+ VE LI A+ G +P KVTE I++L +VS Q EKKT V R+ D + DD
Sbjct: 14 GLKDPSSDQSQQEAKQREAEIRNTILAQVLDQAARARLSNLALVKPDKAKAVENYLIQMARFGQIPGKVTEQGLIEILEKVSQQTEKKTTVKFNRRKVLDSDEEDD 119
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: A0A022RTE8_ERYGU (Uncharacterized protein n=2 Tax=Lamiales TaxID=4143 RepID=A0A022RTE8_ERYGU) HSP 1 Score: 80.5 bits (197), Expect = 2.510e-16 Identity = 44/105 (41.90%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 43 GAGARDPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRK-TYFDDQ 354
G+G +DPE + Q + +L +I+T EAR RL+ IA+VKPDKAR VE++++ AA+ G + KV+E+ I +L Q+++Q K+TKVT+KR+ + DD+
Sbjct: 24 GSGGQDPEKQKAQEEAKMEAEEQRQLMLTRILTPEARARLARIALVKPDKARGVEDVILRAAQMGQIVEKVSEERLISLLEQINTQTTKETKVTIKRRQSVLDDE 128
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Match: A0A1V4K0I2_PATFA (Programmed cell death protein 5 n=22 Tax=Neognathae TaxID=8825 RepID=A0A1V4K0I2_PATFA) HSP 1 Score: 79.7 bits (195), Expect = 4.740e-16 Identity = 45/103 (43.69%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 58 DPEAAQRQAXXXXXXXXXXKQILDQIMTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGQVSSQMEKKTKVTMKRKTYFDDQDSDD 366
DP + Q Q IL Q++ AR RLSN+A+VKPDKA+ VE LI A+ G +P KVTE I++L +VS Q EKKT V R+ D + DD
Sbjct: 23 DPSSDQSQQEAKQREAEIRNTILAQVLDQAARARLSNLALVKPDKAKAVENYLIQMARFGQIPGKVTEQGLIEILEKVSQQTEKKTTVKFNRRKVLDSDEEDD 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11911.3925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11911.3925.1 >prot_M-pyrifera_M_contig11911.3925.1 ID=prot_M-pyrifera_M_contig11911.3925.1|Name=mRNA_M-pyrifera_M_contig11911.3925.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp MTAEARVRLSNIAMVKPDKARRVEEMLIHAAKSGALPAKVTEDHFIQMLGback to top mRNA from alignment at M-pyrifera_M_contig11911:5442..7945- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11911.3925.1 ID=mRNA_M-pyrifera_M_contig11911.3925.1|Name=mRNA_M-pyrifera_M_contig11911.3925.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2504bp|location=Sequence derived from alignment at M-pyrifera_M_contig11911:5442..7945- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11911:5442..7945- >mRNA_M-pyrifera_M_contig11911.3925.1 ID=mRNA_M-pyrifera_M_contig11911.3925.1|Name=mRNA_M-pyrifera_M_contig11911.3925.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig11911:5442..7945- (Macrocystis pyrifera P11B4 male)back to top |