mRNA_M-pyrifera_M_contig119104.3924.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: Q54MU0_DICDI (FtsX domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54MU0_DICDI) HSP 1 Score: 94.4 bits (233), Expect = 3.850e-19 Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 1
Query: 1 CFIVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQ------------------ELYQYSSPRHEWSSSKAVALYGLRHCSKVVSGLDVSAWAYTGLSGYTYPNCSQSAGACVDQLCGNSTTPTA--FLMDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVMAI 546
CF+VVF+V L VSI+++TPVVFL L+E+ GE+D+VL P T D +N+TM+ L+AG EL + H V++ + C + + + W Y + PN Q C + +C NS A F++D+ARE RMGLGR + + + P G++Y+ + LA+ L + DT+ + I
Sbjct: 146 CFLVVFIVSLCVSIITNTPVVFLSLSEASVGEMDMVLTPGSWTLSDQLNYTMLSELLAGTYKEPNGSYFDDNNXXNQYELEEVDDSYHSPRVDGTVSVVSAKSCPNGNTNPNDNLWKY-----HDEPN--QCEPYCFESVCSNSVASKASMFVIDTAREKRMGLGRDWKL--DAPPQGTVYVQENLANKLSISKGDTIFIRI 338
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A7S4MG76_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MG76_9EUKA) HSP 1 Score: 85.1 bits (209), Expect = 2.480e-18 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 1 CFIVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQELYQYSSPRHEWSSSKAVALYGLRHCSKVVSGLD 282
CFIVVFVV LMVS+LSH P+VFL+LAE GE+D+ L P +GFDF+N+T ++ E Y YS+PR+ + ++ Y C + + +D
Sbjct: 10 CFIVVFVVALMVSVLSHAPIVFLKLAELESGEMDVFLLPQKRSGFDFLNYTTASDILNDLEKYSYSTPRY--ADGDSIVYYNANDCMPITAEVD 101
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A7S1IU70_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IU70_9EUGL) HSP 1 Score: 83.2 bits (204), Expect = 2.890e-15 Identity = 62/194 (31.96%), Postives = 93/194 (47.94%), Query Frame = 1
Query: 1 CFIVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQE-----LYQYSSPRHEWSSSKAVALYGLRHCS-------KVVSGLDVSAWAYTGLSGYTYPNCSQSAGACVDQLCGNSTTPTAFLMDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVMAI 546
CF+VVF + L++S+L + P +FLRLAE GEIDL + P G I++T +VAG Y Y +PR + S+ A +GL C +G S+WAY +C C+ + CG + +DS +E RMG GR +P IP G + + L+ DL + D V++ +
Sbjct: 85 CFLVVFCMALLISLLDNVPGIFLRLAEVESGEIDLSISPKSHLGRS-ISYTNFSVVVAGMTDQPAGYYTYHAPRLVFPST---ASWGLHQCQVDEQWLQPTTTGEYDSSWAYVNDD-----DCKDPPPGCLVKKCGWPKLASVIAIDSEKEQRMGYGRAWPWG--TIPAGEVIIDDVLSRDLKVKAGDPVMIRL 267
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A7S4GF48_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GF48_9EUGL) HSP 1 Score: 78.6 bits (192), Expect = 5.900e-14 Identity = 64/196 (32.65%), Postives = 98/196 (50.00%), Query Frame = 1
Query: 1 CFIVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQEL-----YQYSSPRHEWSSSKAVALYGLRHC-------SKVVSGLDVSAWAYTGLSGYTYPNCSQSAGA---CVDQLCGNSTTPTAFLMDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVMA 543
C++VVF + +++S+L + P +FLRLAE +GEIDL + G+ IN+ ++ +AG E Y Y SPR S+ ++ L C + G S WAY G G +C + G CV LC ++ T ++D+ RE RMG G+ +P IP G + M LA +L + D VV++
Sbjct: 65 CWLVVFCMAILLSLLDNVPAIFLRLAEVEKGEIDLQIMSEKRFGYS-INYRQMKQELAGIETNQKNRYSYHSPRIIIPSN---FMFKLSACKLDEMWKTPNSDGYYDSTWAYKGNKG-DESDCMMNIGISLRCVVPLCREASKFTLHVIDTRREQRMGFGKSWPYGP--IPKGQIIMDLALARNLKIREGDGVVLS 253
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A7S1CII3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CII3_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.350e-12 Identity = 60/195 (30.77%), Postives = 92/195 (47.18%), Query Frame = 1
Query: 1 CFIVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAG-----QELYQYSSPRHEWSSSKAVALYGLRHCSKVVSG-----LDVSAWAYTGLSGYTY---PNCSQSA--GACVDQLCGNSTTPTAFLMDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVM 540
C IVV V +M ++L P++FLR AE+R EID+ + +F+N+T V +A Q + Y +PR + K V LY + +C+ S +D + W Y G + P+ G+C+ LCG FL+DSA+E RMGLGR + IP G + +A + + DT +
Sbjct: 49 CLIVVLVSAVMQTLLGQAPLIFLREAETRNNEIDMTVWSERWPRTEFLNYTRVAEQLADAPAEVQGEFAYHAPRIQ----KNVLLYPINNCAGQRSADPAESVDDNLWMYETRDGAPHRGQPDYQDFTCWGSCLSGLCGEGVVGELFLVDSAKERRMGLGRRWEYG--AIPPGEAILHADVAAAMGVGVGDTFAL 237
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A4P9X416_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X416_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 2.950e-11 Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 7 IVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQEL--YQYSSPRHEWSSSKAVALYGLRHCSKVVSGLDVSAWAYTGLSGYTYPNCSQSAG--ACVDQLCGNSTTPTAFLMDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVMAI 546
IVVF V L++S++S TPV+FL LAES GE+DLVL +GF +N+T + + L Q +PR S V+++ C + S +++ ++ G+ P Q C+ +C +DS RE MG+GR + +P +Y++ A LD+ D + + +
Sbjct: 347 IVVFAVALLLSVMSITPVIFLALAESSSGEMDLVLTVRSGSGFTSLNYTQAQLDLQEVNLPAAQLMTPRFV---SSGVSIFKAASCYEW-SANNITGYSNATYGGFAMPTTRQCQWRPGCLFTICDAYIATNFLAIDSDRERAMGIGRKWD--HPAVPADEVYINHYAAKKLDVEVGDWIYLRL 524
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: B0E6Y0_ENTDS (FtsX domain-containing protein n=1 Tax=Entamoeba dispar (strain ATCC PRA-260 / SAW760) TaxID=370354 RepID=B0E6Y0_ENTDS) HSP 1 Score: 58.2 bits (139), Expect = 1.250e-6 Identity = 47/174 (27.01%), Postives = 86/174 (49.43%), Query Frame = 1
Query: 31 MVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQELYQYSSPRHEWSSSKAVALYGLRHCSKVVSGLDVSAWAYTGLSGYTYPNCSQSAGACVDQLCGNSTTPTAFL--MDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVMAI 546
++SILS TP+V+LRL+E G+ID+++ P +G +N T + V ++PR W S A + R+CS D + W Y G S Y C C + C +S ++ L +++ +E ++GLG + + + +Y+ ++++ L L D + ++I
Sbjct: 47 LLSILSTTPIVYLRLSEQNNGQIDMIITPSSDSGGIVLNFTEINKTV------HTATPR--WIGS---AKFFSRNCSFDFKEND-NDWIYYGNSSDIYETCELDE--CFTKYCSSSQWVSSNLIALNTKQEKKIGLGEKWEF--KPLKENEIYLPRRISQQLQLKEGDEMFISI 204
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A6B2KXH2_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXH2_9EUKA) HSP 1 Score: 57.0 bits (136), Expect = 3.090e-6 Identity = 56/188 (29.79%), Postives = 92/188 (48.94%), Query Frame = 1
Query: 1 CFIVVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQELYQYSSPRHEWSSSKAVALYGLRHC-SKVVSGLDVSAWAYTGLSGYTYPN-----CSQSAGACVDQLCGNST-TPTAFLMDSARELRMGLGRYFPMADEVIPV---GSLYMSKQLADDLDLHTDDTV 534
CF+VVFVV ++V+ILS +P++F+RL+E GE+D+++ P S + +N+T + Y+ S+PR +S +Y C + LD W Y +PN C +C ++ C ++ + T +MDS RE M LGR D ++P G +Y+S + + D V
Sbjct: 10 CFLVVFVVSVLVTILSKSPLIFMRLSELDNGELDVMIRPDTSK-YGALNYTQFQREDLPSN-YRSSTPRRVHDTS----VYFSTDCPDQEPLALD---WKY-------HPNNDTDICGWFRMSCFEKHCTSTHYSLTVIMMDSLREKEMLLGR-----DWMLPPLNRGEVYVSSGVVESAKAQVGDYV 176
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A175JGE5_ENTHI (FtsX domain-containing protein n=7 Tax=Entamoeba TaxID=5758 RepID=A0A175JGE5_ENTHI) HSP 1 Score: 55.1 bits (131), Expect = 1.420e-5 Identity = 51/182 (28.02%), Postives = 91/182 (50.00%), Query Frame = 1
Query: 10 VVFVVGL-MVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQELYQYSSPRHEWSSSKAVALYGLRHCSKVVSGLDVSAWAYTGLSGYTYPNCSQSAGACVDQLCGNSTTPTAFL--MDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTVVMAI 546
VVFV+ ++SILS TP+V+LRL+E + G+ID+++ P +G +N T + +V ++PR W S A + CS D + W Y G S + NC C + C +S + L + + +E ++GLG + E + +Y+ +++++ L L D + ++I
Sbjct: 50 VVFVITCTLLSILSTTPLVYLRLSEQKNGQIDMIITPSSDSGGIVLNFTEINKVV------HTATPR--WIGS---AKFFSGDCSFGFEEND-NDWIYYGNSSDIHENCELDE--CFTKYCSSSRHVSGSLIALKTKQEKQIGLGEKWGF--EPLKENEIYLPRRISNQLLLKEGDELYVSI 215
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Match: A0A0S4J7F0_BODSA (FtsX-like permease family protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J7F0_BODSA) HSP 1 Score: 55.1 bits (131), Expect = 1.440e-5 Identity = 54/187 (28.88%), Postives = 87/187 (46.52%), Query Frame = 1
Query: 10 VVFVVGLMVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHT-------MVETLVAGQELYQYSSPRHEWSSSKAVALYGL--RHCSKVVSGLDVSAWAYTGLSGYTYP-NCSQSAGACVDQLC-GNSTTPTAF-LMDSARELRMGLGRYFPMADEVIPVGSLYMSKQLADDLDLHTDDTV 534
VV + +++S+L+H +VF+RLAES G+IDL+++P F+ N M T VA Y S R + S A +G C + + + LS NC C++ C G + P+ F L+D+ RE+RMGLG E + G +++ +A++L L T+
Sbjct: 156 VVLLCAILLSVLTHLQLVFMRLAESENGKIDLLVQPGGQ--FEMANSLNYSVFLDMFPTGVAS-----YHSARVVFDSMSAFPAWGSPSNGCGAYADNITALWYPSSNLSAPDLVRNCVAGTRDCIEAHCSGVRSLPSTFVLLDAQREVRMGLGSG-EWPTEPLGYGEAIVTRGIANELSLEIGSTL 334 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119104.3924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119104.3924.1 >prot_M-pyrifera_M_contig119104.3924.1 ID=prot_M-pyrifera_M_contig119104.3924.1|Name=mRNA_M-pyrifera_M_contig119104.3924.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp MVSILSHTPVVFLRLAESRQGEIDLVLEPHHSTGFDFINHTMVETLVAGQback to top mRNA from alignment at M-pyrifera_M_contig119104:1..546- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119104.3924.1 ID=mRNA_M-pyrifera_M_contig119104.3924.1|Name=mRNA_M-pyrifera_M_contig119104.3924.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig119104:1..546- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119104:1..546- >mRNA_M-pyrifera_M_contig119104.3924.1 ID=mRNA_M-pyrifera_M_contig119104.3924.1|Name=mRNA_M-pyrifera_M_contig119104.3924.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig119104:1..546- (Macrocystis pyrifera P11B4 male)back to top |