prot_M-pyrifera_M_contig119086.3916.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119086.3916.1
Unique Nameprot_M-pyrifera_M_contig119086.3916.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length181
Homology
BLAST of mRNA_M-pyrifera_M_contig119086.3916.1 vs. uniprot
Match: UPI001BFD54F2 (sel1 repeat family protein n=1 Tax=Polynucleobacter sp. MG-Unter2-18 TaxID=2081052 RepID=UPI001BFD54F2)

HSP 1 Score: 58.9 bits (141), Expect = 4.900e-7
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0
Query:    1 HADAPYALARIYRQGQGVPKDEEKAFDLLIQAGGRGNVAAQLELGIMFSE--NRSMRDADEASKWLRMAADKGDSQAQYKLAVLYFESADLIRDYAAGLRLFEQ 102
            HA A Y L   Y +G GVPKDE+KA +LL +A   G  +AQ  +GI  S   +   +D  EA  W   AA  G +  Q +LA  Y     +  +Y      +++
Sbjct:  100 HATATYELFGCYLEGAGVPKDEQKAIELLKKAAEMGEPSAQAVMGIFISGGVHGFTQDQTEALHWFMKAAQGGSAHGQLRLADAYIAGELIQPNYEKAFEYYKK 203          
BLAST of mRNA_M-pyrifera_M_contig119086.3916.1 vs. uniprot
Match: A0A4Q3GTQ4_9HYPH (Sel1 repeat family protein (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3GTQ4_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 3.210e-5
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:    2 ADAPYALARIYRQG---QGVPKDEEKAFDLLIQAGGR-GNVAAQLELGIMFSENRSMRDADEASKWLRMAADKGDSQAQYKLAVLYFESADLIRDYAAGL 97
            A+A  AL R YR+G     V  D E+A ++   A    GN  AQ  L  M+ +  + RDA  A++WL +AA KG  QAQ  L  + F    L R  A GL
Sbjct:   89 ANAFLALGRYYREGIPNSRVKPDRERAREMFAYAASYFGNPDAQYNLARMYLDG-TQRDAKYAARWLGLAAQKGQLQAQVLLGQMLFNGDQLQRQAARGL 187          
BLAST of mRNA_M-pyrifera_M_contig119086.3916.1 vs. uniprot
Match: B4CW69_9BACT (Sel1 domain protein repeat-containing protein n=1 Tax=Chthoniobacter flavus Ellin428 TaxID=497964 RepID=B4CW69_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 5.900e-5
Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 0
Query:    1 HADAPYALARIYRQGQGVPKDEEKAFDLLIQAGGRGNVAAQLELGIMF----SENRSMRDADEASKWLRMAADKGDSQAQYKLAVLYFESADLIRDYAA 95
            H  A  ALAR+YR G GVPKD+EKA +L+ +     N +   ++G  +    ++  + +  DEA  +L  AA  G   AQ  L   Y  ++   +D+ A
Sbjct:  490 HPLATTALARMYRMGDGVPKDDEKAEELIARIAETTNPSVLCQIGFTYLPTGNQPPNEKYVDEALGYLERAAQHGYGPAQGPLGFCYMTASPAHQDFVA 588          
BLAST of mRNA_M-pyrifera_M_contig119086.3916.1 vs. uniprot
Match: A0A3D4X5W6_9FIRM (Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium TaxID=1898203 RepID=A0A3D4X5W6_9FIRM)

HSP 1 Score: 52.8 bits (125), Expect = 8.180e-5
Identity = 35/120 (29.17%), Postives = 54/120 (45.00%), Query Frame = 0
Query:    3 DAPYALARIYRQGQGVPKDEEKAFDLLIQAGGRGNVAAQLELG-------------IMFSENRSMRDA----------------DEASKWLRMAADKGDSQAQYKLAVLYFESADLIRDY 93
            +  Y L R+Y +G G  +DE+KA     +A G+G+ AAQ ++G             I + E     D                 +EA KWL+  AD+G++QA+Y   V+Y    D +  Y
Sbjct:  591 EGQYFLGRMYDKGWGTSRDEKKALYWFEKAAGQGHTAAQKKVGDMKLARGDGLGALIAYEELAEKGDEYAMFMYGVACAEDGRYEEALKWLKPFADRGNTQAEYNCGVIYERMGDRVEAY 710          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119086.3916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI001BFD54F24.900e-734.62sel1 repeat family protein n=1 Tax=Polynucleobacte... [more]
A0A4Q3GTQ4_9HYPH3.210e-539.00Sel1 repeat family protein (Fragment) n=1 Tax=Hyph... [more]
B4CW69_9BACT5.900e-533.33Sel1 domain protein repeat-containing protein n=1 ... [more]
A0A3D4X5W6_9FIRM8.180e-529.17Uncharacterized protein n=1 Tax=Lachnospiraceae ba... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 2..37
e-value: 1.5E-7
score: 41.0
coord: 38..72
e-value: 0.027
score: 23.6
coord: 109..144
e-value: 1.0E-7
score: 41.6
coord: 145..180
e-value: 1.3E-6
score: 37.9
coord: 73..108
e-value: 6.9E-5
score: 32.2
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 109..144
e-value: 1.7E-5
score: 25.3
coord: 145..180
e-value: 6.3E-6
score: 26.7
coord: 39..72
e-value: 0.0047
score: 17.6
coord: 73..108
e-value: 1.0E-6
score: 29.2
coord: 2..32
e-value: 9.2E-5
score: 23.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..51
e-value: 7.5E-12
score: 47.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 52..181
e-value: 6.0E-40
score: 139.9
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 1..180
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 1..50
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 54..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119086contigM-pyrifera_M_contig119086:2..544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119086.3916.1mRNA_M-pyrifera_M_contig119086.3916.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119086 2..544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119086.3916.1 ID=prot_M-pyrifera_M_contig119086.3916.1|Name=mRNA_M-pyrifera_M_contig119086.3916.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
HADAPYALARIYRQGQGVPKDEEKAFDLLIQAGGRGNVAAQLELGIMFSE
NRSMRDADEASKWLRMAADKGDSQAQYKLAVLYFESADLIRDYAAGLRLF
EQASEQGHALAQTYLADIYFSGSVVDQDLETAASWYLSAAQQGNAKAQYM
LGHMYDEGIGFAEDDRIAVEWLRVAAAAGNA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf