mRNA_M-pyrifera_M_contig119077.3912.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A7V2LUM1_9CHLR (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Anaerolineae TaxID=292625 RepID=A0A7V2LUM1_9CHLR) HSP 1 Score: 161 bits (408), Expect = 1.660e-46 Identity = 85/140 (60.71%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 28 RKPVTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
RK VTVR +R K R E I+M+TAYDY AV + + +D+ILVGDS+GMV LG+ETT+PVT++D++HH +AV RGAR PL+V DMPF SY+VS +AVRNA R ++E G AVKLEGG E A T+ A+ GAGI V+GHIG
Sbjct: 9 RKKVTVRTLRAKKRRGEPITMMTAYDYPSAVAVDRAGIDVILVGDSLGMVVLGYETTLPVTMEDMLHHARAVARGARYPLLVGDMPFMSYQVSMEEAVRNAGRFLQEAGMDAVKLEGGRERAETIRAIVGAGIPVMGHIG 148
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A497KEM3_9ARCH (3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497KEM3_9ARCH) HSP 1 Score: 155 bits (392), Expect = 5.550e-46 Identity = 84/136 (61.76%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 40 TVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
TV + + +E+I+M TAYDY A+L E + +DMILVGDSVGMV LG+E VPVTVDDIIHHTKAV+RGA+ PL+VADMPF SY +S + RNA RLI+EGGA AVKLEGG E+A+ V A+ GI V HIG
Sbjct: 3 TVSKLWKMKEKSEKITMTTAYDYPTALLVEKAGLDMILVGDSVGMVVLGYENPVPVTVDDIIHHTKAVVRGAKTPLIVADMPFMSYHISLEETKRNAARLIQEGGADAVKLEGGKEVASMVKAIADTGIPVQAHIG 138
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A1F4Q6C6_9BACT (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=unclassified candidate division NC10 TaxID=1207073 RepID=A0A1F4Q6C6_9BACT) HSP 1 Score: 157 bits (398), Expect = 3.860e-45 Identity = 83/140 (59.29%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 28 RKPVTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
R VTVR +RR E+I+M+TAYDY A + + +D+ILVGDS+GMV LGH TT+PVT+DD++HH KAV RG R L+VAD+PF SY+VS DA+RNA RL+KE GA AVKLEGG E+ +V AL AGI V+GH+G
Sbjct: 3 RDKVTVRTLRRMEERGEKITMLTAYDYPMARAVDDAGIDVILVGDSLGMVVLGHPTTLPVTMDDMVHHCKAVARGVLRALLVADLPFMSYQVSREDALRNAGRLVKESGAEAVKLEGGREILGSVEALVAAGIPVMGHLG 142
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A497B110_9CHLR (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497B110_9CHLR) HSP 1 Score: 157 bits (398), Expect = 4.650e-45 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 25 KRKPVTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
+RK VT+ ++ K R ERI+M+TAYDY A+L + + +DMILVGDS+ MV LGHE T+ VT+D++IHH KAV RGA+ P +V DMPF SY+VS AV NA R +KEGG AVKLEGG EMA T+ A+ AGI V+GHIG
Sbjct: 2 ERKKVTILDLQAKKRKGERITMLTAYDYPTALLVDRAGIDMILVGDSLAMVVLGHENTLAVTMDEMIHHCKAVSRGAKTPFLVGDMPFMSYQVSKTQAVANAGRFLKEGGMDAVKLEGGQEMAETIKAIVDAGIPVMGHIG 142
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A7J3VHH9_9ARCH (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7J3VHH9_9ARCH) HSP 1 Score: 156 bits (395), Expect = 1.120e-44 Identity = 84/137 (61.31%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 37 VTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
+TV + + +E+I+M TAYDY A+L E + +DMILVGDSVGMV LG+E VPVTVDDIIHHTKAV+RGA+ PL+VADMPF SY +S + RNA RLI+EGGA AVKLEGG E+A+ V A+ GI V HIG
Sbjct: 4 ITVSKLWKMKEKSEKITMTTAYDYPTALLVEKAGLDMILVGDSVGMVVLGYENPVPVTVDDIIHHTKAVVRGAKTPLIVADMPFMSYHISLEETKRNAARLIQEGGADAVKLEGGKEVASMVKAIADTGIPVQAHIG 140
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A661VKT7_9CHLR (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VKT7_9CHLR) HSP 1 Score: 155 bits (392), Expect = 3.430e-44 Identity = 82/140 (58.57%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 28 RKPVTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
RK VT+ ++RK E+I+M+TAYDY A+L + + +D+ILVGDS+ MV LGHE+TV VT+D++IHH KAV +GAR PL+V DMPF SY+V+ A+ NA R +KEGG VKLEGG EMAATV A+ AGI V+GHIG
Sbjct: 3 RKKVTILDLQRKKEKGEKITMLTAYDYPTAMLVDRAGIDIILVGDSLAMVVLGHESTVAVTMDEMIHHCKAVSKGARYPLLVGDMPFLSYQVTVEKAIANAGRFLKEGGMDVVKLEGGQEMAATVKAIVDAGIPVMGHIG 142
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A523X457_9CHLR (3-methyl-2-oxobutanoate hydroxymethyltransferase n=4 Tax=root TaxID=1 RepID=A0A523X457_9CHLR) HSP 1 Score: 154 bits (390), Expect = 6.160e-44 Identity = 80/137 (58.39%), Postives = 105/137 (76.64%), Query Frame = 1
Query: 37 VTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
V++ IR + ERI+M+TAYDY+ A L + + + +ILVGDS+GMV LG+E+T+PVT+D++IHHTKAV+RG R LVV DMPF +Y+VS DA+RNA R I+EGGA AVKLEGG MA TV + +GI V+GHIG
Sbjct: 3 VSITQIREMKQKGERIAMLTAYDYSTAKLIDGAGIPLILVGDSLGMVVLGYESTIPVTMDEMIHHTKAVVRGTTRALVVGDMPFMTYQVSVDDALRNAARFIQEGGAQAVKLEGGESMAETVKRIVSSGIPVMGHIG 139
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A3A0DNY9_9BACT (3-methyl-2-oxobutanoate hydroxymethyltransferase n=3 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DNY9_9BACT) HSP 1 Score: 154 bits (390), Expect = 8.640e-44 Identity = 78/137 (56.93%), Postives = 105/137 (76.64%), Query Frame = 1
Query: 37 VTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
+T+ ++ K ++I M+TAYDY+ A L + + +D+ILVGDS+GMV LG+E+TV VT+ D++HH KAV R AR+ +V DMPFGSYEVS G+AVRNA+R ++EGG AVKLEGG EM AT+ A+ AGI V+GHIG
Sbjct: 10 ITILDLQNKKEQRQKIVMMTAYDYSSAALVDQAGIDIILVGDSLGMVMLGYESTVAVTMADMLHHCKAVARAARQAFLVGDMPFGSYEVSPGEAVRNAVRFLQEGGMNAVKLEGGQEMLATIKAIIAAGIPVMGHIG 146
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A4R1BAD2_9ACTN (3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Rubrobacter taiwanensis TaxID=185139 RepID=A0A4R1BAD2_9ACTN) HSP 1 Score: 154 bits (389), Expect = 9.670e-44 Identity = 82/137 (59.85%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 37 VTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
VTV + R ERI+M+TAYDY A L E + V++ILVGDS+GMV LG+++TVPVT++++IHH KAV+RG R LVV D+PFGSY S G AVR+A RL+KEGG AVKLEGG+EM A V A+ GI VVGH+G
Sbjct: 7 VTVPSVLEMKRRGERIAMLTAYDYPTARLLERAGVEVILVGDSLGMVTLGYDSTVPVTLEEMIHHVKAVVRGTSRALVVGDLPFGSYGESPGQAVRSATRLVKEGGCDAVKLEGGSEMVAAVEAVVRVGIPVVGHVG 143
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Match: A0A3D1TGX3_9BACT (3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3D1TGX3_9BACT) HSP 1 Score: 154 bits (389), Expect = 1.020e-43 Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 31 KPVTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMILVGDSVGMVALGHETTVPVTVDDIIHHTKAVMRGARRPLVVADMPFGSYEVSSGDAVRNALRLIKEGGAAAVKLEGGAEMAATVSALTGAGIAVVGHIG 447
KPVTV R+K R ERI M+T YD+ A + + +D ILVGD++GM LG+ETT+PVT+++++ HTKAV RGA+ LVVADMP GSY+V+ D VRNALR +KEGGA A+KLEGG E+A TV A+ AGI V+ HIG
Sbjct: 8 KPVTVSTFRQKKRRGERICMLTGYDHFAAQVLDECGIDAILVGDTLGMTVLGYETTLPVTMEEMLLHTKAVARGAKNALVVADMPLGSYQVTVEDGVRNALRFVKEGGAGAIKLEGGLEVAETVRAIVRAGIPVMAHIG 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119077.3912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119077.3912.1 >prot_M-pyrifera_M_contig119077.3912.1 ID=prot_M-pyrifera_M_contig119077.3912.1|Name=mRNA_M-pyrifera_M_contig119077.3912.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp MLFFFFDDKRKPVTVRGIRRKHRNAERISMVTAYDYNQAVLTESSAVDMIback to top mRNA from alignment at M-pyrifera_M_contig119077:1..544+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119077.3912.1 ID=mRNA_M-pyrifera_M_contig119077.3912.1|Name=mRNA_M-pyrifera_M_contig119077.3912.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=544bp|location=Sequence derived from alignment at M-pyrifera_M_contig119077:1..544+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119077:1..544+ >mRNA_M-pyrifera_M_contig119077.3912.1 ID=mRNA_M-pyrifera_M_contig119077.3912.1|Name=mRNA_M-pyrifera_M_contig119077.3912.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig119077:1..544+ (Macrocystis pyrifera P11B4 male)back to top |