mRNA_M-pyrifera_M_contig11907.3910.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI) HSP 1 Score: 826 bits (2133), Expect = 1.040e-281 Identity = 452/549 (82.33%), Postives = 471/549 (85.79%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGG-EGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDK-------VFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVA-AVSFPSXXXXXXXXXXXXXXXXXXXTGMT-------------ELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLIWLGAAAQRAR 1572
+VHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRM+PVEVRYVPTAADNDIQEVVS+HDGEGQRKLRSRGGGG EGKRV+FDARPYVKLL+SIDTTTPRDERGDLLVFLSGM DMLAV+EGVREYVEAKSPRRWVVLMLHSSLSVEEQDK VFDASPLGTRKMILATNIAETSVTIDGVRFV DSGKAKEMSWDP RSLQEFWVSRASAEQRKGRAGRTGPG+CFRLYAR TFDRL PFAEPEIRRCPLEGLVLQMKSLGL+DPRYFPYLSPPPPENLRAALE+LALLGATD A AVS P+ XXXXXX G LP +P+ P R+ T A TFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAA++SGANPVAEF+S GDPFTVMNAYDEWIRVKAAR+ESSRRWCKRHGLQEQRLYEITKLRRQF+DLLG+AGLIWLGAAAQRAR
Sbjct: 487 EVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSKHDGEGQRKLRSRGGGGGEGKRVMFDARPYVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGLVFDASPLGTRKMILATNIAETSVTIDGVRFVCDSGKAKEMSWDPASGVRSLQEFWVSRASAEQRKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRYFPYLSPPPPENLRAALESLALLGATDAASAVSVPAAAADEAAXXXXXXTEGAVAVGSDPRGGAGLGAPHAERLPAAPESNAEPRRREEGTT-----------ATTTPPTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAAAASGANPVAEFASSHGDPFTVMNAYDEWIRVKAARKESSRRWCKRHGLQEQRLYEITKLRRQFEDLLGSAGLIWLGAAAQRAR 1024
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: A0A6H5K4A6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A6_9PHAE) HSP 1 Score: 561 bits (1446), Expect = 1.200e-186 Identity = 331/477 (69.39%), Postives = 352/477 (73.79%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGG-EGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPTRSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVA-AVSFPSXXXXXXXXXXXXXXXXXXXTGMT-----------------ELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGD 1374
+VHERHAGCDFLLGLLRAVLRRR DLKVVLMSATINPELFSRFFDGAPLIRVPGRM+PVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGG EGKRV+FDARP+VKLL+SIDTTTPRDERGDLLVFLSGM DMLAV+EGVREYVEAKSPRRWVVLMLHSSLSVEEQDK D L RKGRAGRTGPG+CFRLYAR TFDRL PFAEPEIRRCPLEGLVLQMKSLGL+DPR+FPYLSPPPPENLRAAL +LALLGATD A AVS P+ XXXXXXXXXX + LP +P+ P R+ T + P TFDDATARAPLTPLGRVLS LPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFD RAA+++SGANPVAEF+SP G+
Sbjct: 522 EVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGGEGKRVMFDARPFVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGL-----------------------------------------------------RKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMKSLGLDDPRFFPYLSPPPPENLRAALGSLALLGATDPASAVSVPAAAADXXXXXXXXXXEAITEGAVAAGSDLRGGAGLGAPHAERLPAAPESNAEPRRREQGTTAATITPP----------TFDDATARAPLTPLGRVLSKLPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDTRAASAASGANPVAEFASPHGE 935
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: S4R5D4_PETMA (DEAH (Asp-Glu-Ala-His) box polypeptide 34 n=5 Tax=Petromyzon marinus TaxID=7757 RepID=S4R5D4_PETMA) HSP 1 Score: 427 bits (1097), Expect = 2.720e-133 Identity = 251/578 (43.43%), Postives = 328/578 (56.75%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLIWLGAAAQR--ARRARCAGQQGRGGGSTXXXXXXXXSSSDKLRELKMRRGARKRKVLEVNHG 1719
+VHERH CD LLG+LR +L R DL++VLMSATIN +LFSR+ AP+++VPGR+YP++V Y P + GK D RPY++++QSID P DERGDLLVFLSGM D+ V+E + Y A +RW+VL LHS+LS E+QDKVFD +P G RK I++TNIAETSVTIDGVRF+ DSGK KEMS+DP + LQEFW+SRASAEQRKGRAGRTGPG+CFRLYA +D L P+A PE++R PL+ +VLQMKS+GL DPR F +L PPP +L +++ L GA D + LTP+GRVL+ LP+D GKML +G + G E VLT+AAA+S Q+PF A + + S GDP T++N ++EW++VK+ Q SR+WCKRHGL+EQRLYEI L+RQF++LL GL+ G R +R R G++ R +LR +RG +KRK+L + G
Sbjct: 223 EVHERHLHCDLLLGVLRELLPLRDDLRLVLMSATINIQLFSRYLGDAPVLQVPGRLYPIQVIYRPVPEEEKT-----------------------GKSERIDPRPYLRIMQSIDHKYPADERGDLLVFLSGMADIARVAEAAQSY--AVETKRWIVLQLHSTLSAEQQDKVFDLAPEGVRKCIVSTNIAETSVTIDGVRFIVDSGKVKEMSYDPKAKMQRLQEFWISRASAEQRKGRAGRTGPGVCFRLYAESEYDALEPYAVPEVQRVPLDSVVLQMKSMGLGDPRLFGFLEPPPASSLETSMQFLQEQGALDE--------------------------------------------------------------------------QEELTPIGRVLATLPLDVLTGKMLLVGCVLGAVEPVLTIAAAMSVQSPFHRNAHTNPDCSRARRSLESDHGDPLTLLNVFNEWVQVKSGGQVPSRKWCKRHGLEEQRLYEIANLQRQFKELLVQFGLLGGGEEPVRDSVQRVRQHGERRR---------------LHQLRREHEQRGPQKRKLLRLQDG 686
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: UPI001CAA3BAE (probable ATP-dependent RNA helicase DHX34 isoform X3 n=1 Tax=Chelonia mydas TaxID=8469 RepID=UPI001CAA3BAE) HSP 1 Score: 420 bits (1080), Expect = 2.380e-132 Identity = 257/581 (44.23%), Postives = 326/581 (56.11%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLIW--LGAAAQRARRARCAGQQGRGGGSTXXXXXXXXSSSDKLRELKMRRGARKRKVLEVNHGDAG 1728
+VHERH DFLLG+LR +L R DLK+VLMSATIN LF+ +F GAP+++VPGR++P+ V Y P + + SR K D RPY+++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RWVVL LHS+LS+ EQDKVFD P G RK I++TNIAETSVTIDGVRFV DSGK KE+S+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D AP+ PEI+R L+ LVLQMKS+GL DPR FP+L PPP +L A+ L GA D A LTP+G +L+ LPVD +GKML LGALFG +E VLT+AAALS Q+PF + A SP GDP T++N ++EW++VK+ R SSR+WC+R GL+E RLYE LRRQFQ+LL + GL+ G AR++R +LR+ RKRKVL + G+AG
Sbjct: 290 EVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINIRLFAGYFGGAPVVQVPGRLFPITVVYQPIPQEEAL--AASR------------------KPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEISAVLEAAQAY--ATHTQRWVVLPLHSTLSIAEQDKVFDMPPPGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKELSYDPQAKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMGLGDPRTFPFLEPPPQSSLETAVRYLREQGALDRAES--------------------------------------------------------------------------LTPIGSLLAQLPVDVVIGKMLVLGALFGLAEPVLTVAAALSVQSPFLRPTRTNPDCATARRPLESPHGDPLTLLNTFNEWVQVKSERAGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHGLLEPVQGPRDSYARQSR----------------HRERRELHRLRQRHEETEGRKRKVLRLQEGEAG 758
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: A0A7L0EW63_TROML (DHX34 helicase (Fragment) n=1 Tax=Trogon melanurus TaxID=56311 RepID=A0A7L0EW63_TROML) HSP 1 Score: 412 bits (1059), Expect = 1.650e-131 Identity = 242/517 (46.81%), Postives = 301/517 (58.22%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLI 1542
+VHERH DFLLG+LR +L R DLK+VLMSATIN LFS +F GAP+++VPGR++P+ V Y P A + GG GK D PY+++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RW+VL LHS+LSV EQDKVFD +P G RK ILATN+AETSVTIDGVRFV DSGK KEMS+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PP +L A+ L GA D A LTP+G +L+ LPVD VGK+L LG LFG SE LT+AAALS +PF A + A SP GDP T++N ++EW+RVKA R SR+WC+R GL+E RLYE LRRQFQ+LL + L+
Sbjct: 46 EVHERHLHGDFLLGVLRRLLPSRPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYQPVAEEEAAAA-----------------GGKWGKSERLDPLPYLRVLQTIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAY--AARTQRWIVLPLHSTLSVTEQDKVFDVAPPGVRKCILATNVAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPASSSLETAVRYLRDQGALDEAEN--------------------------------------------------------------------------LTPIGNLLAQLPVDVVVGKILVLGVLFGLSEPALTVAAALSVPSPFLRPARPDADRAAARRPLESPHGDPLTLLNLFNEWLRVKAERSGDSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL 469
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: A0A7K4JV00_GEOCA (DHX34 helicase (Fragment) n=1 Tax=Geococcyx californianus TaxID=8947 RepID=A0A7K4JV00_GEOCA) HSP 1 Score: 409 bits (1052), Expect = 3.830e-131 Identity = 240/517 (46.42%), Postives = 302/517 (58.41%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLI 1542
+VHERH DFLLG+LR +L R DLK+VLMSATIN LFSR+F P+++VPGR++P+ V Y P + + V G GK D PY+++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RW+VL LHS+LSV EQDKVFD P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +L A+ L GA D A LTP+G +L+ LPVD VGKML LGALFG +E LT+AA LS Q+PF + + A SP GDP T++N ++EW++VK+ R SSR+WC+R GL+E RLYE LRRQFQ+LL + L+
Sbjct: 46 EVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINIRLFSRYFGDVPVLQVPGRIFPITVIYQPIPKE-EASTV-----------------GKAGKPERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAY--AAQTQRWIVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQLKSMGLGDPRTFPFLEPPPSSSLETAVRYLRDQGALDDAEE--------------------------------------------------------------------------LTPIGNLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAATLSVQSPFLRSSQPNPDCATARRPLESPHGDPLTLLNIFNEWVQVKSERSGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL 468
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: A0A7K7BJT6_9AVES (DHX34 helicase (Fragment) n=1 Tax=Nothoprocta ornata TaxID=83376 RepID=A0A7K7BJT6_9AVES) HSP 1 Score: 410 bits (1053), Expect = 1.490e-130 Identity = 240/517 (46.42%), Postives = 306/517 (59.19%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLI 1542
+VHERH DFLLG+LR +L R DLK++LMSATIN LFS +F GAP+++VPGR +P+ V Y P + GG+ +R+ D RP++++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RWVVL LHS+LSV EQDKVFD P G RK IL+TNIAETSVTIDGVRFV DSGK KEMS+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPPP +L A+ L GA D A LTP+G++L+ LPVD VGK+L LGAL G +E LT+AAALS Q+PF A + A SP GDP T++N ++EW++VK+ R +SR+WC+R GL+E RLYE LRRQFQ+LL + L+
Sbjct: 156 EVHERHLHGDFLLGVLRRLLPARPDLKLILMSATINIGLFSSYFGGAPVLQVPGRSFPITVIYQPIPKEEAAP-------------------GGKTERL--DPRPFLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQPY--AARTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDVLVLQLKSMGLGDPRTFPFLEPPPPSSLETAVRYLREQGALDEAEE--------------------------------------------------------------------------LTPIGKLLAQLPVDVVVGKVLVLGALLGLAEPALTVAAALSVQSPFLRAAPGNPERATARRPLESPHGDPLTLLNVFNEWLQVKSERGGNSRKWCRRRGLEEHRLYEAANLRRQFQELLQDHQLL 575
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: UPI0015D5EB47 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Cygnus atratus TaxID=8868 RepID=UPI0015D5EB47) HSP 1 Score: 419 bits (1076), Expect = 5.090e-130 Identity = 246/517 (47.58%), Postives = 307/517 (59.38%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLI 1542
+VHERH DFLLG+LR +L R DLK+VLMSATIN LFS +F GAP+++VPGR++P+ V Y P + EV + GK D RPY+++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RW+VL LHS+LSV EQDKVFD P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D +P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +L A+ L GA D A LTP+G +L+ LPVD VGKML LGALFG +E LT+AAALS Q+PF + A+ A SP GDP T++NA++EW++VK+ R SSR+WC+R GL+E RLYE LRRQFQ+LL + L+
Sbjct: 262 EVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYEPIPKE----EVAA----------------AAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVY--AAHTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPAASLETAVRYLREQGALDEAEE--------------------------------------------------------------------------LTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLNAFNEWVQVKSERGGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL 682
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: A0A452H9F6_9SAUR (DExH-box helicase 34 n=3 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452H9F6_9SAUR) HSP 1 Score: 411 bits (1057), Expect = 7.450e-130 Identity = 241/517 (46.62%), Postives = 303/517 (58.61%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLI 1542
+VHERH DFLLG+LR +L R DLK+VLMSATIN LF+ +F GAP+++VPGR++P+ V Y P QE + GK D RPY+++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RWVVL LHS+LS+ EQDKVFD P G RK I++TNIAETSVTIDGVRFV DSGK KE+S+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D AP+ PEI+R L+ LVLQMKS+GL DPR FP+L PPP +L A+ L GA D A LTP+G +L+ LPVD +GKML LGALFG + VLT+AAALS Q+PF A+ A SP GDP T++N ++EW++VK+ SR+WC+R GL+E RLYE LRRQFQ+LL + GL+
Sbjct: 290 EVHERHLHSDFLLGVLRRLLPSRPDLKLVLMSATINIRLFAGYFGGAPVVQVPGRLFPITVVYQPIP-----QEEAA----------------ASGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAY--ATHTQRWVVLPLHSTLSLAEQDKVFDMPPSGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKELSYDPQAKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQMKSMGLGDPRTFPFLEPPPQSSLEMAVRYLREQGALDEAES--------------------------------------------------------------------------LTPIGSLLAQLPVDVVIGKMLVLGALFGLAGPVLTVAAALSVQSPFLRPVRANPDCATARRPLESPHGDPLTLLNTFNEWVQVKSEWAGGSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHGLL 709
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Match: A0A8C3GJ77_CAIMO (DExH-box helicase 34 n=1 Tax=Cairina moschata domestica TaxID=1240228 RepID=A0A8C3GJ77_CAIMO) HSP 1 Score: 418 bits (1074), Expect = 9.190e-130 Identity = 246/517 (47.58%), Postives = 306/517 (59.19%), Query Frame = 1
Query: 1 QVHERHAGCDFLLGLLRAVLRRRADLKVVLMSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDGEGQRKLRSRGGGGEGKRVIFDARPYVKLLQSIDTTTPRDERGDLLVFLSGMGDMLAVSEGVREYVEAKSPRRWVVLMLHSSLSVEEQDKVFDASPLGTRKMILATNIAETSVTIDGVRFVADSGKAKEMSWDPT---RSLQEFWVSRASAEQRKGRAGRTGPGLCFRLYARGTFDRLAPFAEPEIRRCPLEGLVLQMKSLGLEDPRYFPYLSPPPPENLRAALEALALLGATDVAAVSFPSXXXXXXXXXXXXXXXXXXXTGMTELPVSPQPTLPPPRQSSRQTXXXDSSPQTAAAAAILNTFDDATARAPLTPLGRVLSALPVDPSVGKMLALGALFGESEHVLTLAAALSTQTPFDARAAASSSGANPVAEFSSPDGDPFTVMNAYDEWIRVKAARQESSRRWCKRHGLQEQRLYEITKLRRQFQDLLGNAGLI 1542
+VHERH DFLLG+LR +L R DLK+VLMSATIN LFS +F GAP+++VPGR++P+ V Y P + EV + GK D RPY+++LQ+ID P +ERGDLLVFLSG+ ++ AV E + Y A +RW+VL LHS+LSV EQDKVFD P G RK ILATNIAETSVTIDGVRFV DSGK KEMS+DP + LQEFW+SRASAEQRKGRAGRTGPG+C+RLYA +D P+ PEI+R L+ LVLQ+KS+GL DPR FP+L PPP +L A+ L GA D A LTP+G +L+ LPVD VGKML LGALFG +E LT+AAALS Q+PF + A+ A SP GDP T++NA++EW++VK+ R SSR+WC+R GL+E RLYE LRRQFQ+LL + L+
Sbjct: 258 EVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIYEPIPKE----EVAA----------------AAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQVY--ATQTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFPPYPVPEIQRVALDALVLQVKSMGLGDPRTFPFLEPPPSASLETAVRYLRDQGALDEAEE--------------------------------------------------------------------------LTPIGTLLAQLPVDVVVGKMLVLGALFGLAEPTLTVAAALSVQSPFLRLSNANPDCATARRPLESPHGDPLTLLNAFNEWVQVKSERGGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHRLL 678 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11907.3910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11907.3910.1 >prot_M-pyrifera_M_contig11907.3910.1 ID=prot_M-pyrifera_M_contig11907.3910.1|Name=mRNA_M-pyrifera_M_contig11907.3910.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=562bp MSATINPELFSRFFDGAPLIRVPGRMYPVEVRYVPTAADNDIQEVVSRHDback to top mRNA from alignment at M-pyrifera_M_contig11907:668..9457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11907.3910.1 ID=mRNA_M-pyrifera_M_contig11907.3910.1|Name=mRNA_M-pyrifera_M_contig11907.3910.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8790bp|location=Sequence derived from alignment at M-pyrifera_M_contig11907:668..9457- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11907:668..9457- >mRNA_M-pyrifera_M_contig11907.3910.1 ID=mRNA_M-pyrifera_M_contig11907.3910.1|Name=mRNA_M-pyrifera_M_contig11907.3910.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3372bp|location=Sequence derived from alignment at M-pyrifera_M_contig11907:668..9457- (Macrocystis pyrifera P11B4 male)back to top |