mRNA_M-pyrifera_M_contig119.3905.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119.3905.1 vs. uniprot
Match: A0A835YQG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG9_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.390e-18 Identity = 72/199 (36.18%), Postives = 87/199 (43.72%), Query Frame = 1
Query: 856 QPRAVIDLQRVWRGHRARQRLAAYLKWLEDKARRRREYERYLAALAAQRKAGDKYSEQVR----RRVWGRSEFAHTGWRPRYEVE---NQPNMHEHTWTPPRGSSTGVRTYKVFLPPASERDRLTLTTDKNAWAGVPVGIAKRRPPPKDLGPSPRSRGGAAYRKLNRSSGRGDGEDTERGG---VVTKYNWLPAPLVAG 1422
+P A D+QRV+RGHRAR RL RR WGR+ F HTGWRP+ + + H PPR ++ G+R V LPP +E D L D W GVPV A R+ P LGP PR G A R +GRG+ GG VTKY WLPA L+AG
Sbjct: 142 RPAAARDVQRVFRGHRARARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRAWGRAAFVHTGWRPQRGAAAAWSAAELEAHAAAPPRATAAGLRVSCVTLPPRTEWDLKLLAGDGAVWVGVPVATAPRKCKPPPLGPPPRP-GTAGAWSPPRLAGRGEAGGAGEGGGHQFVTKYTWLPASLLAG 339 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119.3905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119.3905.1 >prot_M-pyrifera_M_contig119.3905.1 ID=prot_M-pyrifera_M_contig119.3905.1|Name=mRNA_M-pyrifera_M_contig119.3905.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=482bp MRGMASTLGSMASALHLPTGFKWCGVGAIEAQIAADDDDASRSDGSDPSVback to top mRNA from alignment at M-pyrifera_M_contig119:30311..38189- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119.3905.1 ID=mRNA_M-pyrifera_M_contig119.3905.1|Name=mRNA_M-pyrifera_M_contig119.3905.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7879bp|location=Sequence derived from alignment at M-pyrifera_M_contig119:30311..38189- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119:30311..38189- >mRNA_M-pyrifera_M_contig119.3905.1 ID=mRNA_M-pyrifera_M_contig119.3905.1|Name=mRNA_M-pyrifera_M_contig119.3905.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2892bp|location=Sequence derived from alignment at M-pyrifera_M_contig119:30311..38189- (Macrocystis pyrifera P11B4 male)back to top |