prot_M-pyrifera_M_contig118982.3901.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118982.3901.1
Unique Nameprot_M-pyrifera_M_contig118982.3901.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
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BLAST of mRNA_M-pyrifera_M_contig118982.3901.1 vs. uniprot
Match: A0A7K1ZEG9_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZEG9_9ACTN)

HSP 1 Score: 62.8 bits (151), Expect = 2.750e-8
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 0 
Query:   92 PVPVGSPGDVTLSETGLRLTGGELVLFDQSESTVFAALVDVLGEPDADTGLEEAPFCSGERSRFVTWGDLEVVFTED 168
            PV VG+PG VTL ETGL+   G +V F Q  + V   +  VLG PD+ T       C  + +R V WG LE+VF +D
Sbjct:  345 PVAVGTPGPVTLVETGLQFDTGSVVRFGQPMAAVLDEVRSVLGAPDSATNFRTTDACV-DGARSVRWGQLELVFLQD 420
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118982.3901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7K1ZEG9_9ACTN2.750e-844.16Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.829
NoneNo IPR availableTMHMMTMhelixcoord: 2..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118982contigM-pyrifera_M_contig118982:8..547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118982.3901.1mRNA_M-pyrifera_M_contig118982.3901.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118982 8..547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118982.3901.1 ID=prot_M-pyrifera_M_contig118982.3901.1|Name=mRNA_M-pyrifera_M_contig118982.3901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
LIALVVVVGLIGAVVLALVAFGGDDGGDTATDTDPTTTLATTTTLDATTT
APPDTTTTADPDQTATTVDPTETTTTTTSTTTTEAPSTTTTPVPVGSPGD
VTLSETGLRLTGGELVLFDQSESTVFAALVDVLGEPDADTGLEEAPFCSG
ERSRFVTWGDLEVVFTEDELDSGESRFTQW
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