mRNA_M-pyrifera_M_contig118957.3899.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118957.3899.1
Unique NamemRNA_M-pyrifera_M_contig118957.3899.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A7K1ZAN6_9ACTN (Cysteine desulfurase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZAN6_9ACTN)

HSP 1 Score: 247 bits (631), Expect = 1.130e-78
Identity = 119/148 (80.41%), Postives = 132/148 (89.19%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFSF 444
            EIPWKFEAGTPMVAEAVGLG A+DYL  LGMDNVRQHEVELTAYALRTL E HGDKITIHGP+EPAERGGV+SF+Y     +VHPHD+AQVLDQ+G+ VRAGHHCAKPLM VLGANATSRASLYVYND+SD+D+L+ AL A D+ FSF
Sbjct:  266 EIPWKFEAGTPMVAEAVGLGRAVDYLSELGMDNVRQHEVELTAYALRTLTERHGDKITIHGPTEPAERGGVMSFIYS----DVHPHDVAQVLDQSGIAVRAGHHCAKPLMDVLGANATSRASLYVYNDKSDLDKLADALSAVDDIFSF 409          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A3C0HTU2_9ACTN (Cysteine desulfurase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HTU2_9ACTN)

HSP 1 Score: 231 bits (588), Expect = 3.780e-72
Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFSF 444
            EIPWKFEAGTPMVAEAVGLGAAIDYLD LGMDNVR HE+ELT YALRTL E +GDKI IHGP   +ERGGVLSFVY      VHPHDIAQVLDQAGVCVRAGHHCAKPL+  +   ATSRAS+YVYNDESDID L+ AL A+ + F+F
Sbjct:  266 EIPWKFEAGTPMVAEAVGLGAAIDYLDNLGMDNVRAHEIELTDYALRTLNERYGDKIVIHGPQVASERGGVLSFVYGEPDMRVHPHDIAQVLDQAGVCVRAGHHCAKPLLQTMNVPATSRASVYVYNDESDIDALAEALEASSDIFAF 413          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A6B1H4D9_9ACTN (Cysteine desulfurase n=6 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H4D9_9ACTN)

HSP 1 Score: 223 bits (568), Expect = 3.550e-69
Identity = 106/145 (73.10%), Postives = 124/145 (85.52%), Query Frame = 1
Query:    4 IPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFF 438
            +PWKFEAGTP +AEAVGLGAA+DYL+ LGM+ VR+HEV LT YALRTL + +GD ITIHGP+EPAERGGVLSF Y+G    +HPHD+AQVLD++ VCVRAGHHCAKPLM VLG +ATSRAS+YVYNDESD+D L+ AL  AD FF
Sbjct:  268 VPWKFEAGTPPIAEAVGLGAAVDYLNGLGMEQVREHEVALTGYALRTLNQRYGDDITIHGPTEPAERGGVLSFEYKG----IHPHDVAQVLDRSAVCVRAGHHCAKPLMRVLGCSATSRASMYVYNDESDVDALADALADADAFF 408          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A349B9E2_9ACTN (Cysteine desulfurase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B9E2_9ACTN)

HSP 1 Score: 223 bits (567), Expect = 6.370e-69
Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFSF 444
            E+PWKFEAGTPM+AEAVGLGAA +YL  LGMD VRQHEVELTAY LRTL E  GD +TIHGPSEPA RGGV SF Y+    ++HPHD+ QV D+ GVCVRAGHHCAKPLM  LG NAT+RASLYVYND  DID L+ A+ AA +FFSF
Sbjct:  276 ELPWKFEAGTPMIAEAVGLGAACEYLTGLGMDAVRQHEVELTAYTLRTLTERFGDDVTIHGPSEPAARGGVFSFAYK----DIHPHDLTQVFDEHGVCVRAGHHCAKPLMRALGVNATARASLYVYNDTDDIDALADAMDAAGQFFSF 419          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A6L7JKG3_9ACTN (Cysteine desulfurase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7JKG3_9ACTN)

HSP 1 Score: 221 bits (562), Expect = 1.950e-68
Identity = 107/146 (73.29%), Postives = 121/146 (82.88%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFF 438
            E+PWKFEAGTP +AEAVGLGAA+DYL ALGM  VR HE+ LT YALRTL+  +GD ITIHGPSEPAER GVLSF Y+     VHPHD+AQ+LD+AG+CVRAGHHCAKPLM VLG  ATSRAS+YVYNDESD+D L+ AL  AD FF
Sbjct:  253 EVPWKFEAGTPPIAEAVGLGAAVDYLSALGMPQVRVHEMSLTEYALRTLKGRYGDSITIHGPSEPAERSGVLSFEYK----SVHPHDVAQILDRAGICVRAGHHCAKPLMRVLGCAATSRASIYVYNDESDVDALTDALGEADAFF 394          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A5Q2RNB5_9ACTN (Cysteine desulfurase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RNB5_9ACTN)

HSP 1 Score: 221 bits (563), Expect = 2.000e-68
Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFS 441
            E+PWKFEAGTP +AE VGLGAA+DYL  LGMD VR+HEV LT YALRTL E  GD++T+HGPSEPAERGGVLSFV++    ++HPHD+ QV DQ GVCVRAGHHCAKPLM  +G  AT+RASLYVYNDESD+D L+ AL +A +FF+
Sbjct:  267 EVPWKFEAGTPPIAEIVGLGAAVDYLTELGMDAVREHEVSLTGYALRTLHERFGDRLTVHGPSEPAERGGVLSFVFD----DIHPHDLTQVFDQHGVCVRAGHHCAKPLMRTMGVAATARASLYVYNDESDVDALAEALQSASDFFA 409          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A7V9V8L0_9ACTN (Cysteine desulfurase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9V8L0_9ACTN)

HSP 1 Score: 214 bits (544), Expect = 1.390e-65
Identity = 103/146 (70.55%), Postives = 120/146 (82.19%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFF 438
            E+PWKFEAGTP +A AVGLGAAIDYL+ALGMD VR+HEV LT YAL +L E HGD +TI+GP+E +ERGGVLSF Y+G    +HPHDI+QVLDQ+GVCVRAGHHCAKPLM  +G  AT+RAS YVYNDESD+D LS AL    +FF
Sbjct:  267 ELPWKFEAGTPPIAAAVGLGAAIDYLEALGMDEVRRHEVVLTDYALTSLAERHGDDLTIYGPTEASERGGVLSFAYKG----IHPHDISQVLDQSGVCVRAGHHCAKPLMRRMGVGATARASFYVYNDESDVDALSEALTKTSDFF 408          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A520XWX2_9ACTN (Cysteine desulfurase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XWX2_9ACTN)

HSP 1 Score: 212 bits (540), Expect = 5.700e-65
Identity = 103/148 (69.59%), Postives = 123/148 (83.11%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFSF 444
            E+P KFEAGTP +AE VGLGAA+DYL ALGM++VR HEV LTAYA+R+L+E  GD ITIHGPSEPA RGGVLS +Y+    +VHPHDI+QVLDQ  V VRAGHHCAKPLM V+G NAT+RASLY+YNDE+D+D L+ AL +AD+ F F
Sbjct:  267 ELPHKFEAGTPAIAEIVGLGAAVDYLTALGMEDVRAHEVSLTAYAMRSLKERFGDDITIHGPSEPASRGGVLSLIYK----DVHPHDISQVLDQDNVYVRAGHHCAKPLMQVMGLNATARASLYLYNDEADVDTLADALASADDIFGF 410          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A6G0A4K4_9ACTN (Cysteine desulfurase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A4K4_9ACTN)

HSP 1 Score: 212 bits (539), Expect = 8.920e-65
Identity = 103/147 (70.07%), Postives = 119/147 (80.95%), Query Frame = 1
Query:    4 IPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFSF 444
            +P KFEAGTP +AEAVG GAA+DYL ALGMD+VR+HEVELT+YALRTL E  GD+I I GPSEPAERGGV S  Y     ++HPHDI+QVLD+  VC+RAGHHCAKPLM  +G  AT+RAS+YVYNDESDID LS  L AA EFF+F
Sbjct:  272 LPHKFEAGTPPIAEAVGFGAAVDYLSALGMDSVRRHEVELTSYALRTLTERFGDQIAISGPSEPAERGGVFSLAYR----DLHPHDISQVLDERAVCIRAGHHCAKPLMRYMGVGATARASVYVYNDESDIDALSEGLEAAGEFFAF 414          
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Match: A0A7V8X1S4_9ACTN (Cysteine desulfurase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X1S4_9ACTN)

HSP 1 Score: 211 bits (538), Expect = 1.170e-64
Identity = 104/146 (71.23%), Postives = 116/146 (79.45%), Query Frame = 1
Query:    1 EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLEEAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVRAGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFF 438
            EIPWKFEAGTP + EAVGL AAIDYL  LGM+ VR+HEV LT YALRTL E  GD ITIHGPSEPA+RGGVLS  +     +VHPHD++Q+LDQ GVCVRAGHHCAKPLM  LG  AT+RASLYVYNDESD+D L+ AL A   FF
Sbjct:  269 EIPWKFEAGTPPITEAVGLHAAIDYLTGLGMEAVRKHEVALTGYALRTLNERFGDDITIHGPSEPAQRGGVLSLAFR----DVHPHDLSQILDQHGVCVRAGHHCAKPLMRRLGVGATARASLYVYNDESDVDALADALEATSTFF 410          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118957.3899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1ZAN6_9ACTN1.130e-7880.41Cysteine desulfurase n=2 Tax=Acidimicrobiaceae bac... [more]
A0A3C0HTU2_9ACTN3.780e-7276.35Cysteine desulfurase n=7 Tax=Acidimicrobiaceae bac... [more]
A0A6B1H4D9_9ACTN3.550e-6973.10Cysteine desulfurase n=6 Tax=Acidimicrobiia bacter... [more]
A0A349B9E2_9ACTN6.370e-6972.30Cysteine desulfurase n=1 Tax=Acidimicrobiaceae bac... [more]
A0A6L7JKG3_9ACTN1.950e-6873.29Cysteine desulfurase n=1 Tax=Acidimicrobiia bacter... [more]
A0A5Q2RNB5_9ACTN2.000e-6870.07Cysteine desulfurase n=1 Tax=Actinomarinicola trop... [more]
A0A7V9V8L0_9ACTN1.390e-6570.55Cysteine desulfurase n=1 Tax=Actinomycetia bacteri... [more]
A0A520XWX2_9ACTN5.700e-6569.59Cysteine desulfurase n=1 Tax=Acidimicrobiales bact... [more]
A0A6G0A4K4_9ACTN8.920e-6570.07Cysteine desulfurase n=2 Tax=Bacteria TaxID=2 RepI... [more]
A0A7V8X1S4_9ACTN1.170e-6471.23Cysteine desulfurase n=1 Tax=Acidimicrobiia bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118957contigM-pyrifera_M_contig118957:99..545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score178.3
Seed ortholog evalue2.6e-42
Seed eggNOG ortholog1313172.YM304_14820
Preferred namesufS
KEGG rclassRC00961,RC01789,RC02313
KEGG koko:K11717
KEGG ReactionR03599,R11528
KEGG Pathwayko00450,ko01100,map00450,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944
EggNOG free text desc.Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EggNOG OGs2GIVK@201174,4CMVJ@84992,COG0520@1,COG0520@2
EC2.8.1.7,4.4.1.16
COG Functional cat.H
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size447
Cds size447
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815708.6056004-CDS-M-pyrifera_M_contig118957:98..5451622815708.6056004-CDS-M-pyrifera_M_contig118957:98..545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118957 99..545 -
1692277532.2999914-CDS-M-pyrifera_M_contig118957:98..5451692277532.2999914-CDS-M-pyrifera_M_contig118957:98..545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118957 99..545 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118957.3899.1prot_M-pyrifera_M_contig118957.3899.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118957 99..545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118957.3899.1

>prot_M-pyrifera_M_contig118957.3899.1 ID=prot_M-pyrifera_M_contig118957.3899.1|Name=mRNA_M-pyrifera_M_contig118957.3899.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
EIPWKFEAGTPMVAEAVGLGAAIDYLDALGMDNVRQHEVELTAYALRTLE
EAHGDKITIHGPSEPAERGGVLSFVYEGDSGEVHPHDIAQVLDQAGVCVR
AGHHCAKPLMSVLGANATSRASLYVYNDESDIDQLSAALHAADEFFSF*
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mRNA from alignment at M-pyrifera_M_contig118957:99..545-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118957.3899.1 ID=mRNA_M-pyrifera_M_contig118957.3899.1|Name=mRNA_M-pyrifera_M_contig118957.3899.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig118957:99..545- (Macrocystis pyrifera P11B4 male)
GAGATCCCGTGGAAGTTCGAGGCCGGTACCCCCATGGTGGCCGAAGCCGT CGGCCTCGGCGCCGCCATCGACTATCTCGACGCGCTGGGCATGGACAATG TGCGCCAGCACGAGGTCGAGCTCACCGCCTACGCCCTGCGCACCCTCGAG GAAGCCCACGGCGACAAGATCACCATCCACGGCCCCAGCGAGCCGGCCGA GCGCGGCGGCGTCCTCTCGTTCGTCTACGAGGGCGACTCCGGCGAGGTCC ACCCCCACGACATCGCCCAGGTGCTCGACCAGGCCGGCGTCTGCGTGCGA GCCGGACACCACTGCGCCAAACCCCTCATGTCCGTGCTCGGCGCCAATGC CACCTCGCGAGCCTCGCTCTACGTGTACAACGACGAATCCGACATCGATC AGCTCTCGGCCGCGCTCCACGCGGCCGACGAGTTCTTCTCGTTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig118957:99..545-

>mRNA_M-pyrifera_M_contig118957.3899.1 ID=mRNA_M-pyrifera_M_contig118957.3899.1|Name=mRNA_M-pyrifera_M_contig118957.3899.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig118957:99..545- (Macrocystis pyrifera P11B4 male)
GAGATCCCGTGGAAGTTCGAGGCCGGTACCCCCATGGTGGCCGAAGCCGT
CGGCCTCGGCGCCGCCATCGACTATCTCGACGCGCTGGGCATGGACAATG
TGCGCCAGCACGAGGTCGAGCTCACCGCCTACGCCCTGCGCACCCTCGAG
GAAGCCCACGGCGACAAGATCACCATCCACGGCCCCAGCGAGCCGGCCGA
GCGCGGCGGCGTCCTCTCGTTCGTCTACGAGGGCGACTCCGGCGAGGTCC
ACCCCCACGACATCGCCCAGGTGCTCGACCAGGCCGGCGTCTGCGTGCGA
GCCGGACACCACTGCGCCAAACCCCTCATGTCCGTGCTCGGCGCCAATGC
CACCTCGCGAGCCTCGCTCTACGTGTACAACGACGAATCCGACATCGATC
AGCTCTCGGCCGCGCTCCACGCGGCCGACGAGTTCTTCTCGTTCTGAGAG
ATCCCGTGGAAGTTCGAGGCCGGTACCCCCATGGTGGCCGAAGCCGTCGG
CCTCGGCGCCGCCATCGACTATCTCGACGCGCTGGGCATGGACAATGTGC
GCCAGCACGAGGTCGAGCTCACCGCCTACGCCCTGCGCACCCTCGAGGAA
GCCCACGGCGACAAGATCACCATCCACGGCCCCAGCGAGCCGGCCGAGCG
CGGCGGCGTCCTCTCGTTCGTCTACGAGGGCGACTCCGGCGAGGTCCACC
CCCACGACATCGCCCAGGTGCTCGACCAGGCCGGCGTCTGCGTGCGAGCC
GGACACCACTGCGCCAAACCCCTCATGTCCGTGCTCGGCGCCAATGCCAC
CTCGCGAGCCTCGCTCTACGTGTACAACGACGAATCCGACATCGATCAGC
TCTCGGCCGCGCTCCACGCGGCCGACGAGTTCTTCTCGTTCTGA
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