mRNA_M-pyrifera_M_contig11894.3895.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11894.3895.1 vs. uniprot
Match: D7FJ94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ94_ECTSI) HSP 1 Score: 677 bits (1747), Expect = 1.270e-227 Identity = 432/901 (47.95%), Postives = 509/901 (56.49%), Query Frame = 1
Query: 1 QFVDGNGLLSCERVSYRWRLATDRTSLWKRACQSAFPHLGDQHFE-SAYASCSAYEGDWREVFLDGNRESRSTVLDWKMEAV--GRENGADALVNGDADESERRYFPPFSLCGYSFSLIADPGGNPRAANQAQAAGAPRVEKGLSVYLTVEFQSGLPDTPLWG----GGFLSHRAFPPPPLQVGPGHPWLLAGEGNTSGSGDREVNRDPHGLRRRRRRCRTREGRVKVVSHVREPSVIERGCCAAFSLSAVNKAGLKDVMWVSSMDDDRFFPGRSSWGVHCLLPTSRIQDPEAGFLKDGSLTVRLRLRLLFLTAHVYTTADLASHCGFGVVPVRGHDQPYHYHGYREIRGRRGRRENHRSMPWNT------GLSQWGWPGA--------GKTVGPLPCLTFEVLRCTTVEEMEKLVAIALDVPSTNDIRLWVITQPLTDTPLAPRQLLSGKGRAVRLLDGARESPSLVRLLTSDTMDDTCRVRLWVEQRSDGGFWEME-------------------RELPRWQAPDMPVHRCAAAVVEAPSRPPTT------STLTSPPTAKESFAGVRLSCTADIPPWEMRSALGWGPRT--WSPPVEPGPPEEATGAGATSGAGRGSGV--SPTIPPREERILVFLKTLGLNVERDGVDGDDARG---KGCRGGTKEEDGGCSDGEGXXXXXXXGSQGLPVYLTHAVLRRRSPLRSLFELAAKLLPEGVAPEELGAYIEELPCVWQGVPAETAGREVVRACVSFPLPSSTKAERVEKGSSGVNVSKRFFSCPPPSSVPLPSGHRPKWHASMAPVARGAGRREVTEIFDDXXXXXXXEEEQALENCPITLKEAGLGAGASICFFRAGCGGQGRASVGRTYVDIAEELVKRMRELLQGRGPLGRVHLLKV 2544
+F+DGNGLLSCE VSY WR ATDR LW+RAC SAFPHL D +F S Y CSAYEGD+RE FLDGNR +RSTVLDW MEAV G +GAD + GD ++SERRYFPPFSLCGY F L+ADP GNPRAA+QA+AAGAP VEKGLSVYLTV F P TP WG G S FPPPP + G PW +G E DPHGLRRRRRR RTREGR +VSH +P+ I R CC AFSL+AV AG K V+WVSSM+ DRF+ GR SWGVHCL+P ++QDPE GF+KDG LTVRLR RLLFL HVYTTADLASH GFGVVPVRG D+ +H++G + + +E R+ P +T G PG K GPLPC+TFEVLRCTT+EE+E L+A L V IRLWVI+QP TD PLAPRQLLSGKG R LD + SPSL RLL+ D +D+TCRVRLWVEQR DGGFWE E R+ + AP P + + S T S+ ++ P ++++AGVRLS TAD+ P+ +S L W + +PP P E IPP EERILVF+KTLGL E RG GC GG S P YLTHA LR SPLRSLFELAA +AP++L AY+E+LP VWQ T E+ A + P ST A R G XXXXXX + +TL+ AGL +G SICFFRAG R +V RTY E LV+ M LL+G GPLGRVHL+K+
Sbjct: 41 EFLDGNGLLSCEAVSYCWRRATDRAHLWQRACMSAFPHLRDYYFSRSPYTCCSAYEGDYRETFLDGNRGNRSTVLDWNMEAVTGGAADGADGMEGGDPEQSERRYFPPFSLCGYLFMLLADPTGNPRAASQAEAAGAPPVEKGLSVYLTVAFHDDAPGTPPWGVGGVAGGASFEGFPPPPQHLLVGQPWGA----EEAGGARAEAKSDPHGLRRRRRRARTREGRAAIVSHAGDPAAIARECCTAFSLAAVKTAGDKGVVWVSSMEGDRFWLGRRSWGVHCLIPMGKVQDPEQGFVKDGRLTVRLRARLLFLFLHVYTTADLASHRGFGVVPVRGRDRRFHFYG-NDGTEQEEEQETSRNHPRDTPPAAATGSDGRSSPGGKKRNTSTPAKGGGPLPCITFEVLRCTTLEEVEGLIARTLGVER-EGIRLWVISQPFTDGPLAPRQLLSGKGLPARFLDDGQNSPSLFRLLSGDAVDETCRVRLWVEQRGDGGFWETEGGRDATRLSRVWLRRRQQQRQKEKTGAPLEPSSDGSRWSGDGGSGAGDTDGSWVSSSPSTQPDPEDNYAGVRLSRTADVYPFHQQSTLAWESASDESAPPTAGSPASEXXXXXXXXXXXXXXXXXXGQRIPP-EERILVFVKTLGLGNEESQSAAGTWRGGDSNGCGGGVA------------------ASPPTPKYLTHAALRASSPLRSLFELAAAEHDTALAPQDLEAYVEDLPWVWQSAVVAT-DPEIYNAETAEPSGGSTAAVR------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGD-------VGVTLERAGLSSGTSICFFRAG----DRPAVRRTYNAAVEGLVEEMNMLLRGEGPLGRVHLIKM 898
BLAST of mRNA_M-pyrifera_M_contig11894.3895.1 vs. uniprot
Match: K8YTT7_NANGC (Potassium channel modulatory factor 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTT7_NANGC) HSP 1 Score: 166 bits (420), Expect = 1.170e-38 Identity = 192/734 (26.16%), Postives = 269/734 (36.65%), Query Frame = 1
Query: 160 YEGDWREVFLDGNRESRSTVLDWKMEAVGRENGADALVNGDADESERRYFPPFSLCGYSFSLIADPGGNPRAANQAQAAGAPRVEKGLSVYLTVEFQSGLPDTPLWGGGFLSHRA--FPPPP----LQVGPGHPWLLAGEGNTSGSGDREVNRDPHGLRRRRRRCRTREGRVKVVSH---VREPSVIERGCCAAFSLSAVNKAGL-KDVMWVSSMDDDRFFPGRSSWGVHCLLPTSRIQDPEAGFLKDGSLTVRLRLRLLFLTAHVYTTADLASHCGFGVVPVRGHDQPYHYHGYREIRGRRGRRENHRSMPWNTGLSQWGWPGAGKTVGPLPCLTFEVLRCTTVEEMEKLVAIALDVPSTNDIRLWVITQPLTDTPLAPRQLLSGKGRAVRLLDG-----------------------------------------------------ARESPSLVRL--LTSDTMDDTCRVRLWVEQRSDGGFWEMERELPRWQAPDMPVHRCAAAVVEAPSRPPTTSTLT-----SPPTAKESFAGVRLSCTADIPPWEMRSALGWGPRTWSP----PVEPGPPEEATGAGATSGAGRGSGVSPTIPP-----REERILVFLKTLGLNVERDGVDGDDARGKGCRGGTKEEDGGCSDGEGXXXXXXXGSQGLPVYLTHAVLRRRSPLRSLFELAAKLLPEGVAPEELGAYIEELPCVWQGVPAETAGREVVRACVSFPLPS 2124
Y GDW+ +F D NR +RS V +W + D L N ERRY P F + Y+F +I DP GNP +E G+SVYL + LP + + A P PP L PG +A + +G P GL + H + P + CC AFSL+A N+ ++V W SSM +DRF R +WGVH LLP ++++DP +GF+ D +L +++RLRLL+LT V A LA+H GFG++ GA G LT+E+ CTT+ ++++A L +PS RLWV TQP DT L PR++L+ G + A E S V L L MD R+W E DGGF P W + V +AP +T S P E+ G C DIP A +T SP P ++ A + + A +PP + +LVFLK + G YL+HAV+ R+ LR +F L L+ PE LGA++E P WQ G+ + R ++ PLP+
Sbjct: 3 YNGDWKALFQDRNRRNRSAVFEWTV--------TDFLSN-----PERRYSPSFRVEDYTFKVIVDPVGNPNVYF---------LEPGVSVYLACSPAAPLPPSTAATAALAASVAAGLPIPPVAEALVQNPGFSEAVAAATAAAATGM------PTGLNPNHHMEAAAMAALSGYGHGGGIGSPPG-DWECCCAFSLTACNQQRKGRNVTWHSSMLNDRFHKNRKNWGVHSLLPVTKLKDPASGFVVDDALKLKVRLRLLYLTVKVVRNAHLAAHEGFGIMDT----------------------------------------GAEAPAGADDSLTYELFHCTTLTAFKEMLARDLGMPSPEHFRLWVFTQPWPDTILCPREILTNAGGSSNSSSSNGQPTPTTAPPVAQNQNPHQLNPNAAVTPPQHTPLAXXXXXXXXXXXXXXXXLADEDASAVTLFSLLQLHMDGLGVARVWAECAEDGGF----ASTPAWTSGTAAVEEMDEEERDAPELSVLMATSQDEGQGSQPDKGENSRGEADGCLPDIPGLHQCQAH----QTLSPVALMPDSRDLCHQSHAAQSAAAATEDPAALAVVPPCPMPSPDMHVLVFLKWMNP-----------------------------------------VSGRIAYLSHAVVTHRTLLRHMFVLVGGLVHR--PPETLGAHMETTPATWQ-----RCGQGMHRM-IACPLPA 610
BLAST of mRNA_M-pyrifera_M_contig11894.3895.1 vs. uniprot
Match: A0A6G0X370_9STRA (MATH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X370_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.440e-8 Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 706 CAAFSLSAVNKAG-LKDVMWVSSMDDDRFFPGRSSWGVHCLLPTSRIQDPEAGFLK---DGSLTVRLRLRLLFLTAHVYTTADLASHCGFGVVP 975
CA F+L+ V+ + K+++W SS+ D++F S+WGVH L S +QDP G++ DGSL V R+ +L LT ++ +H G G+ P
Sbjct: 233 CAVFTLTVVHSSDPTKNIVWHSSLSDNKFNATLSNWGVHSLGEISLLQDPALGYINAADDGSLHVATRVHVLTLTIRLFLEDGFMTHQGLGLGP 326 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11894.3895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11894.3895.1 >prot_M-pyrifera_M_contig11894.3895.1 ID=prot_M-pyrifera_M_contig11894.3895.1|Name=mRNA_M-pyrifera_M_contig11894.3895.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=848bp QFVDGNGLLSCERVSYRWRLATDRTSLWKRACQSAFPHLGDQHFESAYASback to top mRNA from alignment at M-pyrifera_M_contig11894:1082..8407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11894.3895.1 ID=mRNA_M-pyrifera_M_contig11894.3895.1|Name=mRNA_M-pyrifera_M_contig11894.3895.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7326bp|location=Sequence derived from alignment at M-pyrifera_M_contig11894:1082..8407- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11894:1082..8407- >mRNA_M-pyrifera_M_contig11894.3895.1 ID=mRNA_M-pyrifera_M_contig11894.3895.1|Name=mRNA_M-pyrifera_M_contig11894.3895.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5088bp|location=Sequence derived from alignment at M-pyrifera_M_contig11894:1082..8407- (Macrocystis pyrifera P11B4 male)back to top |