prot_M-pyrifera_M_contig118933.3891.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118933.3891.1
Unique Nameprot_M-pyrifera_M_contig118933.3891.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
BLAST of mRNA_M-pyrifera_M_contig118933.3891.1 vs. uniprot
Match: A0A1I3Q2S9_9PLAN (RHS repeat-associated core domain-containing protein n=2 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3Q2S9_9PLAN)

HSP 1 Score: 84.7 bits (208), Expect = 3.090e-17
Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    1 SETEYDERGRTVRTIRLESLDITVDPTTGDSTLAASGLALWSTETFYDAEGRVHQQISADGQTTEYEYDALGRQIAMIGTAVLIDGV 87
            ++T YD  GR V+++RL  + IT+    GD+TL+++G AL ST+T YDA+GRV +QI A G  T YEYDALGRQ A IGT + +  V
Sbjct: 8500 TQTIYDSLGREVKSVRLSGVQITISGA-GDATLSSAGTALSSTQTVYDADGRVSKQIGAAGDVTTYEYDALGRQSATIGTPLALAAV 8585          
BLAST of mRNA_M-pyrifera_M_contig118933.3891.1 vs. uniprot
Match: UPI001AC895C7 (tRNA(Glu)-specific nuclease WapA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001AC895C7)

HSP 1 Score: 53.9 bits (128), Expect = 2.100e-6
Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    5 YDERGRTVRTIRLES---LDITVDPTTGDSTL---AASGLALWSTETFYDAEGRVHQQISADGQTTEYEYDALGRQIAMI 78
            YD+ GR VR IR  S    + ++DP  G  +    A +   L +T+TFYDA+GRV     A G TT YEYD LGR+  +I
Sbjct: 1336 YDDEGRQVRVIRNASSPGYNTSLDPALGHYSARPDAGTDEDL-TTQTFYDAQGRVQATADAGGMTTHYEYDVLGRRTRVI 1414          
BLAST of mRNA_M-pyrifera_M_contig118933.3891.1 vs. uniprot
Match: A0A1G1CJJ1_9BACT (Uncharacterized protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1CJJ1_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 2.830e-6
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    1 SETEYDERGRTVRTIRLESLDITVD----PTTGDSTLAASGLALWSTETFYDAEGRVHQQISADGQTTEYEYDALGRQIAMI 78
            S T YD  GR  R+ RL ++ I +     P    S   ++     ST + YDA G+V + I+AD + T YEYDA GRQ A+I
Sbjct:  259 SRTVYDSIGRVARSERLSNVVIDIVAAGVPACPSSVFLSAATVTSSTSSRYDAAGQVLESINADNEVTRYEYDASGRQTAVI 340          
BLAST of mRNA_M-pyrifera_M_contig118933.3891.1 vs. uniprot
Match: A0A7X7F117_9BACT (RHS repeat protein (Fragment) n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7F117_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.300e-5
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    5 YDERGRTVRTIRLESLDI-TVDPTTGDSTLAASGLALWSTETFYDAEGRVHQQI--------SADGQTTEYEYDALGRQIAMIGTAVL 83
            YDE+GR V+ +RLE +++  VD   GD+ ++  G  +W           V + I        ++   TTEYEYD+LGRQIA +G AVL
Sbjct:  238 YDEKGRAVKKLRLEGVEVGLVD---GDTVVSDWGSEVWRXXXXXXXXXXVWKSIGRHDASDPNSARPTTEYEYDSLGRQIAALGPAVL 322          
BLAST of mRNA_M-pyrifera_M_contig118933.3891.1 vs. uniprot
Match: A0A2E2B1J7_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2E2B1J7_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 4.810e-5
Identity = 30/78 (38.46%), Postives = 38/78 (48.72%), Query Frame = 0
Query:    5 YDERGRTVRTIRLESLDITVDPTTGDSTLAASGLAL-------WSTETFYDAEGRVHQQISADGQTTEYEYDALGRQI 75
            YD  GR + T  L+ + I + P      L  +            S++T YDA GRV+Q IS  G  T YEYD  GRQI
Sbjct: 2990 YDALGRVIETQYLKGVTIDIAPDAEHDGLYVTSFTYPTTPDIQTSSQTVYDAAGRVYQSISTTGTVTTYEYDTAGRQI 3067          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118933.3891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I3Q2S9_9PLAN3.090e-1751.72RHS repeat-associated core domain-containing prote... [more]
UPI001AC895C72.100e-643.75tRNA(Glu)-specific nuclease WapA n=1 Tax=Anaerolin... [more]
A0A1G1CJJ1_9BACT2.830e-640.24Uncharacterized protein n=1 Tax=Lentisphaerae bact... [more]
A0A7X7F117_9BACT1.300e-538.64RHS repeat protein (Fragment) n=1 Tax=Pirellulacea... [more]
A0A2E2B1J7_9BACT4.810e-538.46Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031325RHS repeatPFAMPF05593RHS_repeatcoord: 47..77
e-value: 3.7E-8
score: 33.7
IPR006530YD repeatTIGRFAMTIGR01643TIGR01643coord: 47..76
e-value: 2.5E-7
score: 28.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118933contigM-pyrifera_M_contig118933:195..455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118933.3891.1mRNA_M-pyrifera_M_contig118933.3891.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118933 195..455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118933.3891.1 ID=prot_M-pyrifera_M_contig118933.3891.1|Name=mRNA_M-pyrifera_M_contig118933.3891.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
SETEYDERGRTVRTIRLESLDITVDPTTGDSTLAASGLALWSTETFYDAE
GRVHQQISADGQTTEYEYDALGRQIAMIGTAVLIDGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031325RHS_repeat
IPR006530YD