mRNA_M-pyrifera_M_contig118927.3890.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: UPI001B88D76D (latent-transforming growth factor beta-binding protein 1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D76D) HSP 1 Score: 66.2 bits (160), Expect = 2.870e-10 Identity = 59/134 (44.03%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 16 NDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALG-----------LDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAGYEDVG-------GACADINECSRGTDDCVD---GEICINTEGSFTC 354
N+C +A CTD ++ C C PGFSGDGVTC DVDECAL XXXXXXXXXXXXXX C G G +D+NEC+ G D+CVD G +C NT GSF C
Sbjct: 59 NNCHADATCTDTPASFQCDCNPGFSGDGVTCSDVDECALSPXXXXXXXXXXXXXXXXXXXXXXXXXXINSCIQATIPFLLVLKFCPVGLRTWGIHKPARAQVRSDVNECATGADNCVDPSLGGLCTNTLGSFNC 192
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: A0A5B8XQ06_9DELT (Uncharacterized protein n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XQ06_9DELT) HSP 1 Score: 65.9 bits (159), Expect = 4.080e-10 Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 16 NDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLD 141
NDC+ NA C D +++C CLPGF GDGVTC D+DECALG D
Sbjct: 494 NDCSSNAACIDTPTSFTCECLPGFEGDGVTCTDIDECALGTD 535
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: A0A226NTI9_COLVI (Uncharacterized protein n=1 Tax=Colinus virginianus TaxID=9014 RepID=A0A226NTI9_COLVI) HSP 1 Score: 65.9 bits (159), Expect = 4.160e-10 Identity = 63/112 (56.25%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 22 CAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAGYEDVGGACADINEC-SRGTDDCVDGEICINTEGSFTC 354
C NA CT+ G+Y C C G+SGDG TC D+DECA G XXXXXXXXXXXXXXXXXXXXXX A G +C DI+EC S GT+DC C NT+GS+TC
Sbjct: 811 CNANAACTNTPGSYECNCSSGYSGDGFTCNDIDECAEGTHTXXXXXXXXXXXXXXXXXXXXXXMPSSGTAA-PEGRAPGPFSCKDIDECASGGTNDCSPHATCTNTDGSYTC 921
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: A0A8J1TUV6_OWEFU (Ofus.G071077 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TUV6_OWEFU) HSP 1 Score: 63.9 bits (154), Expect = 9.350e-10 Identity = 37/113 (32.74%), Postives = 45/113 (39.82%), Query Frame = 1
Query: 16 NDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAGYEDVGGACADINECSRGTDDCVDGEICINTEGSFTC 354
N C E A C + G Y C CLPG++GDG+TC ++DEC LGLD C G C DINEC + C +C N S C
Sbjct: 34 NTCDELATCIELDGGYRCQCLPGYTGDGITCSNIDECLLGLDSCSTSEESQEECTDTNGLF-----------VCTCSTNGKGELCGDINECITIPNVCTTNAVCTNLYHSSRC 135
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: A0A8J1Y7J7_OWEFU (Ofus.G162159 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y7J7_OWEFU) HSP 1 Score: 63.2 bits (152), Expect = 3.620e-9 Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 16 NDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALG 135
N CA NAECT+ G++ C+C+PG+SGDG+ C+D+DECA G
Sbjct: 280 NTCALNAECTNVDGSFGCSCMPGYSGDGIICVDIDECATG 319
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: C3Y1K3_BRAFL (EGF-like domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y1K3_BRAFL) HSP 1 Score: 57.8 bits (138), Expect = 8.000e-9 Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 1 CATSNNDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECA 129
C T ++C+ +A CT+ G+++C C PG++GDGVTC DVDECA
Sbjct: 3 CETGTDNCSPDASCTNIPGSFTCVCNPGYTGDGVTCTDVDECA 45
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: UPI0003F0C4F0 (fibrillin-2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0C4F0) HSP 1 Score: 62.0 bits (149), Expect = 9.230e-9 Identity = 38/119 (31.93%), Postives = 48/119 (40.34%), Query Frame = 1
Query: 1 CATSNNDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAGYE-DVGGACADINECSRGTDDCVDGEICINTEGSFTC 354
C C ENA+C SG Y C C+ G+ GDG TC ++ C C G+ + G CADI+ECS GT+ CV C NT G+F C
Sbjct: 366 CVEGTPSCDENADCIPTSGGYECKCIDGYYGDGQTCTEIRPC--------NWKSPFGHRCGGESTGCEETTGGGYKCPCGIGFSRNSDGICADIDECSPGTNTCVATAQCTNTYGAFLC 476
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: UPI000F555CA1 (neurogenic locus Notch protein-like isoform X1 n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F555CA1) HSP 1 Score: 61.2 bits (147), Expect = 1.540e-8 Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 1 CATSNNDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECA 129
C+T N++C+ N+EC++ G+YSC C PG+SGDG TC D DEC+
Sbjct: 100 CSTGNDNCSANSECSNTKGSYSCTCKPGYSGDGRTCKDFDECS 142
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: UPI00106AE943 (uncharacterized protein LOC114533022 isoform X1 n=5 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AE943) HSP 1 Score: 61.2 bits (147), Expect = 1.770e-8 Identity = 38/113 (33.63%), Postives = 49/113 (43.36%), Query Frame = 1
Query: 22 CAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAG--YEDVGGACADINECSRGTDDCVDGEICINTEGSFTC 354
C NA CTD +++CAC GFSGDG+TC+D++EC CA G Y+ C DI+EC+R T C C NT GS+ C
Sbjct: 4116 CNANAICTDTEASFTCACKEGFSGDGITCIDLNECVSN-------------PCEDGATCQNIVGAAGYRCICARGKEYDYQSRRCQDIDECARKTFSCHVNAECENTIGSYNC 4215
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Match: Q8WPL1_OIKDI (Fibrillin-like protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=Q8WPL1_OIKDI) HSP 1 Score: 60.8 bits (146), Expect = 2.360e-8 Identity = 55/113 (48.67%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 16 NDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAGYEDVGGACADINECSRGTDDCVDGEICINTEGSFTC 354
++C+ NA C + GTY C C G+ G+G+TC DVDECAL +D XXXXXXXXXXXXXXXXXXXXX C DI+EC T +C + IC N G + C
Sbjct: 1009 HNCSVNAACANAFGTYECHCDEGYDGNGITCEDVDECALEIDECGPANVXXXXXXXXXXXXXXXXXXXXXFDPAFLAQRIAYTGCEDIDECVEATHECHELAICGNFAGGYNC 1121 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118927.3890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118927.3890.1 >prot_M-pyrifera_M_contig118927.3890.1 ID=prot_M-pyrifera_M_contig118927.3890.1|Name=mRNA_M-pyrifera_M_contig118927.3890.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp CATSNNDCAENAECTDGSGTYSCACLPGFSGDGVTCLDVDECALGLDSCDback to top mRNA from alignment at M-pyrifera_M_contig118927:28..381+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118927.3890.1 ID=mRNA_M-pyrifera_M_contig118927.3890.1|Name=mRNA_M-pyrifera_M_contig118927.3890.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig118927:28..381+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118927:28..381+ >mRNA_M-pyrifera_M_contig118927.3890.1 ID=mRNA_M-pyrifera_M_contig118927.3890.1|Name=mRNA_M-pyrifera_M_contig118927.3890.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig118927:28..381+ (Macrocystis pyrifera P11B4 male)back to top |