prot_M-pyrifera_M_contig1189.3882.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig1189.3882.1
Unique Name	prot_M-pyrifera_M_contig1189.3882.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	149

Homology

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BLAST of mRNA_M-pyrifera_M_contig1189.3882.1 vs. uniprot
Match: D7G8H7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8H7_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 4.880e-52
Identity = 97/153 (63.40%), Postives = 111/153 (72.55%), Query Frame = 0

Query:    1 MDDPPLPTCWAGLQAMGTLLGTMCGFVSAVLLTPSQG-ETTGGLPAAPGVIVGASLGVLAAHSAGESNQTLRQLIYLPIFTVGAAAAMTAVIYWLAGDVVSLSLAHRSIVQGGTLGVIVLAAAASLGPTAVFTVHNHNMLLRRAS---AFDDR 149
            MDD   PTCWAG+QAMGTLLGTM GFVSA LLTP  G E   GLPAAPGVI+G+SLGVLAA+SAGE  Q LRQL+YL + +VGAAA  TA   WL GDV+           GG++G++VLA  ASLG TAVFT+  HNMLL RA+   AFDDR
Sbjct:    1 MDDLLQPTCWAGMQAMGTLLGTMFGFVSAALLTPIDGGEREHGLPAAPGVIMGSSLGVLAAYSAGEGTQPLRQLLYLLLLSVGAAAVTTAACSWLTGDVLQ---------NGGSVGIMVLATVASLGSTAVFTIDKHNMLLTRAATAAAFDDR 144

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig1189.3882.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig1189.3882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8H7_ECTSI	4.880e-52	63.40	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 62..72
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..94
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 95..113
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 114..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..61
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 134..149
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..43
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 108..130
None	No IPR available	TMHMM	TMhelix		coord: 41..63
None	No IPR available	TMHMM	TMhelix		coord: 73..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig1189	contig	M-pyrifera_M_contig1189:16576..21202 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig1189.3882.1	mRNA_M-pyrifera_M_contig1189.3882.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig1189 16576..21202 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig1189.3882.1 ID=prot_M-pyrifera_M_contig1189.3882.1|Name=mRNA_M-pyrifera_M_contig1189.3882.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
MDDPPLPTCWAGLQAMGTLLGTMCGFVSAVLLTPSQGETTGGLPAAPGVI
VGASLGVLAAHSAGESNQTLRQLIYLPIFTVGAAAAMTAVIYWLAGDVVS
LSLAHRSIVQGGTLGVIVLAAAASLGPTAVFTVHNHNMLLRRASAFDDR