mRNA_M-pyrifera_M_contig118888.3877.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A3D5DCQ6_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCQ6_9GAMM) HSP 1 Score: 94.4 bits (233), Expect = 1.690e-23 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFAN 234
FA LKP G+L++SGPTEN LY++GR+ AG GKGD HH N++R+I IT GF +RT +PF + P+LF+V EF++
Sbjct: 18 FANILKPAGKLLVSGPTENLLYKLGRVAAGFHGKGDYHHTNVNRLIEDITAHGFRHVRTVPIPFPILPSLFKVCEFSS 95
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A7C3EN46_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7C3EN46_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 7.560e-19 Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 10 KLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFAN 234
K+K G+LIISGPTEN +YRIGR+ AG GKGD HH NID +I E GF R +PF++ P LF+V F
Sbjct: 145 KMKSNGKLIISGPTENIVYRIGRLLAGFAGKGDYHHRNIDDIINTSIENGFEVQEVRYLPFKIPPYLFKVISFVK 219
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A0P6X897_9CHLR (Uncharacterized protein n=1 Tax=Leptolinea tardivitalis TaxID=229920 RepID=A0A0P6X897_9CHLR) HSP 1 Score: 77.0 bits (188), Expect = 2.220e-15 Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFANAP 240
F ++KPGGRLI+SGPTEN+LYR GR AG GK H NI + E GF+ +PFR P LF + F N P
Sbjct: 148 FQSRIKPGGRLILSGPTENYLYRFGRFLAGYSGKIHYHRNNIYGLERIAREMGFILKDKSILPFRFLPPLFNILLFENPP 227
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A847G1F0_9CHLR (Class I SAM-dependent methyltransferase n=1 Tax=Leptolinea sp. TaxID=2699749 RepID=A0A847G1F0_9CHLR) HSP 1 Score: 76.3 bits (186), Expect = 4.880e-15 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFAN 234
F K+KPGG LI+SGPTEN +Y IGR+ AG GGKG H NI + + GF+ + +PF++ P LF + F N
Sbjct: 155 FRNKIKPGGCLIMSGPTENFIYHIGRILAGFGGKGRYHKTNIFHLEKNALDAGFILDKKETLPFKIPPFLFNILVFRN 232
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A7C1ETX1_9PROT (Methyltransferase domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C1ETX1_9PROT) HSP 1 Score: 70.1 bits (170), Expect = 8.210e-13 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 13 LKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFANA 237
LK GRLIISGPTEN Y++GR AG GKGD H NI+ + I + GFV + + +P LF++ EF A
Sbjct: 146 LKANGRLIISGPTENTFYKLGRFLAGFSGKGDYHIHNIEHIKKEIIKAGFVLINEKSLPLPFLK-LFKILEFKKA 219
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: UPI0019B44733 (Class I SAM-dependent methyltransferase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019B44733) HSP 1 Score: 60.5 bits (145), Expect = 3.730e-9 Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFANA 237
F LKPGG L++S PTEN LYR+GR AG G HH N + I GF RT+ +P +++ V ++A A
Sbjct: 147 FRTWLKPGGALLVSLPTENALYRLGRRLAGFSGH--YHHANAGTIDPVIVRTGFRKERTQKIPVGGPMSIYWVMDYARA 223
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: UPI001AF7FE16 (Methyltransferase domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI001AF7FE16) HSP 1 Score: 57.8 bits (138), Expect = 4.010e-8 Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRL 198
A KLKPGGRLI+SGPTE+ LY+IGR G + H N+ + I + GF RT P RL
Sbjct: 150 IARKLKPGGRLIMSGPTESTLYKIGRFMVGYNKYHEYHRNNVYLLKQGILDNGFRLERTAFFPNRL 215
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A2V8ATU5_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8ATU5_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 5.220e-8 Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQG--FVPLRTRGVPFRLAPALFRVAEFAN 234
F LKPGG L++SGPTE+ LY+IGRM AG KG H +I V IT F + R +P F + +A
Sbjct: 142 FGDALKPGGTLVVSGPTESALYKIGRMLAGFARKGGYHRTDIFHVHETITRDRARFDVVAHRALPLTHIVEAFHIYAYAR 221
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A2D7I5A4_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I5A4_9DELT) HSP 1 Score: 54.3 bits (129), Expect = 7.340e-7 Identity = 30/75 (40.00%), Postives = 37/75 (49.33%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAE 225
FA KL P G+LI+S PTEN LY+ GR AG KG H I + A F + R +P LF V+
Sbjct: 145 FARKLAPQGKLILSVPTENVLYKFGRAVAGFSEKGHYHRTGIKELRLAARRADFSETQIRQIPMPGPGCLFHVSS 219
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Match: A0A6I1QTD6_9CHLR (Methyltransferase domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I1QTD6_9CHLR) HSP 1 Score: 54.3 bits (129), Expect = 7.700e-7 Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 1 FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGG---KGDEHHPNIDRVIAAITEQGFVPLRTRGVPFRLAPALFRVAEFANAPI 243
F LKPGGRL++SGPTE+ +Y+ GR AG +G+ HH +I + + Q V R VP R P F + +A A +
Sbjct: 147 FKRLLKPGGRLVVSGPTESFMYKAGRAVAGFLNSHYRGEYHHRDIFDIDRELRAQWRVE-RATWVPRRPLPRAFLLTRYAPAQV 229 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118888.3877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118888.3877.1 >prot_M-pyrifera_M_contig118888.3877.1 ID=prot_M-pyrifera_M_contig118888.3877.1|Name=mRNA_M-pyrifera_M_contig118888.3877.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp FAVKLKPGGRLIISGPTENHLYRIGRMNAGCGGKGDEHHPNIDRVIAAITback to top mRNA from alignment at M-pyrifera_M_contig118888:300..545- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118888.3877.1 ID=mRNA_M-pyrifera_M_contig118888.3877.1|Name=mRNA_M-pyrifera_M_contig118888.3877.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=246bp|location=Sequence derived from alignment at M-pyrifera_M_contig118888:300..545- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118888:300..545- >mRNA_M-pyrifera_M_contig118888.3877.1 ID=mRNA_M-pyrifera_M_contig118888.3877.1|Name=mRNA_M-pyrifera_M_contig118888.3877.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig118888:300..545- (Macrocystis pyrifera P11B4 male)back to top |