prot_M-pyrifera_M_contig118766.3864.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118766.3864.1
Unique Nameprot_M-pyrifera_M_contig118766.3864.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length35
Homology
BLAST of mRNA_M-pyrifera_M_contig118766.3864.1 vs. uniprot
Match: A0A1Z9UBL4_9GAMM (AmiS/UreI transporter n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UBL4_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 1.310e-9
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    3 RKDFGKLLPYSVISIGVLTCWVPGLLILTENW 34
            +KDFG  LPY+ I +GV TCW+PGLL+LT NW
Sbjct:  133 QKDFGTFLPYATICVGVFTCWIPGLLVLTGNW 164          
BLAST of mRNA_M-pyrifera_M_contig118766.3864.1 vs. uniprot
Match: A0A3D5D9B4_9GAMM (AmiS/UreI transporter n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5D9B4_9GAMM)

HSP 1 Score: 54.3 bits (129), Expect = 5.530e-8
Identity = 19/34 (55.88%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 VPRKDFGKLLPYSVISIGVLTCWVPGLLILTENW 34
            V +KD G  LPY VI++G+ TCW+PG+L+LT++W
Sbjct:  131 VLQKDLGNFLPYFVIAVGIGTCWIPGMLMLTDHW 164          
BLAST of mRNA_M-pyrifera_M_contig118766.3864.1 vs. uniprot
Match: A0A083ZZR4_9GAMM (Acid-activated urea channel n=2 Tax=unclassified Serratia TaxID=2647522 RepID=A0A083ZZR4_9GAMM)

HSP 1 Score: 49.7 bits (117), Expect = 3.300e-6
Identity = 15/32 (46.88%), Postives = 25/32 (78.12%), Query Frame = 0
Query:    3 RKDFGKLLPYSVISIGVLTCWVPGLLILTENW 34
            ++D G+ LP+  + +G+ TCW+PG+L+LT NW
Sbjct:  133 KRDLGRALPHMTLLVGIFTCWLPGILMLTGNW 164          
BLAST of mRNA_M-pyrifera_M_contig118766.3864.1 vs. uniprot
Match: R2SSX3_9ENTE (Uncharacterized protein n=19 Tax=Enterococcaceae TaxID=81852 RepID=R2SSX3_9ENTE)

HSP 1 Score: 46.6 bits (109), Expect = 4.580e-5
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0
Query:    1 VPRKDFGKLLPYSVISIGVLTCWVPGLLILTENW 34
            V +K+ GK + Y  I  GV+TCW+PG L+LT NW
Sbjct:  128 VLKKEIGKPVLYYAIFEGVVTCWIPGFLMLTNNW 161          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118766.3864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A1Z9UBL4_9GAMM1.310e-965.63AmiS/UreI transporter n=3 Tax=Gammaproteobacteria ... [more]
A0A3D5D9B4_9GAMM5.530e-855.88AmiS/UreI transporter n=1 Tax=Gammaproteobacteria ... [more]
A0A083ZZR4_9GAMM3.300e-646.88Acid-activated urea channel n=2 Tax=unclassified S... [more]
R2SSX3_9ENTE4.580e-552.94Uncharacterized protein n=19 Tax=Enterococcaceae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038523AmiS/UreI transporter superfamilyGENE3D1.25.40.600coord: 1..34
e-value: 1.5E-6
score: 29.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118766contigM-pyrifera_M_contig118766:5..109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118766.3864.1mRNA_M-pyrifera_M_contig118766.3864.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118766 5..109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118766.3864.1 ID=prot_M-pyrifera_M_contig118766.3864.1|Name=mRNA_M-pyrifera_M_contig118766.3864.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=35bp
VPRKDFGKLLPYSVISIGVLTCWVPGLLILTENW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038523AmiSUreI_transpt_sf