prot_M-pyrifera_M_contig118764.3862.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118764.3862.1
Unique Nameprot_M-pyrifera_M_contig118764.3862.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517PY77_9PLAN (Type II secretion system protein F n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517PY77_9PLAN)

HSP 1 Score: 274 bits (701), Expect = 6.950e-90
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query:    1 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV 142
            MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV
Sbjct:  227 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV 368          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A518AFM3_9PLAN (Type II secretion system protein F n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFM3_9PLAN)

HSP 1 Score: 220 bits (560), Expect = 1.430e-68
Identity = 107/141 (75.89%), Postives = 128/141 (90.78%), Query Frame = 0
Query:    1 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 141
            MNYSTF+EMAGVLLSYH+PL+DSL+LAAE TGN K+I QFRSVAEKLEQG  +  SIQSA + P Y++SM++NPAHQN+LP +M+E+ARVY+TR LNR+EWIK+I+PV LVVLVAGGIT+CYAL+VFLPFVEILKMLGSPS
Sbjct:  227 MNYSTFSEMAGVLLSYHVPLTDSLILAAESTGNPKLITQFRSVAEKLEQGASLGVSIQSAGQFPEYVKSMMVNPAHQNQLPGVMTEMARVYRTRALNRMEWIKHILPVALVVLVAGGITICYALIVFLPFVEILKMLGSPS 367          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A518IL68_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IL68_9PLAN)

HSP 1 Score: 178 bits (452), Expect = 2.410e-52
Identity = 85/141 (60.28%), Postives = 112/141 (79.43%), Query Frame = 0
Query:    1 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 141
            MNYSTFAEM+G+LL+Y +PL +SL LAAE TGN+K+I +  S++  L +G  ++  IQS  + P +I+ M+M   HQN LP IMSEIARVY+ RVLNRI+WIK I+PV L++++AGGIT CY L+VF+PFVEILKMLGSP+
Sbjct:  227 MNYSTFAEMSGILLTYDVPLHESLTLAAESTGNTKIITESHSLSRLLVRGTSLKEGIQSCKQFPDFIKLMMMEKTHQNHLPQIMSEIARVYRARVLNRIDWIKRIIPVTLLIVIAGGITACYTLIVFIPFVEILKMLGSPT 367          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517VNY5_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VNY5_9PLAN)

HSP 1 Score: 176 bits (445), Expect = 2.690e-51
Identity = 83/141 (58.87%), Postives = 113/141 (80.14%), Query Frame = 0
Query:    1 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 141
            MNYSTF EM  +LLSY++PL+++  LAAE TG+SK+I   +S+   LEQG  +E  IQS    P +I++M+M   +QN LP+I+SEI+RVY+TR+LNRI+W+KNI+PV L+++VAGGIT CY ++VFLPFVEILKMLGSP+
Sbjct:  227 MNYSTFTEMTSLLLSYNVPLTEAFTLAAESTGSSKVIADTKSLTNLLEQGVSLEEGIQSCRHFPVFIKTMIMEKTYQNHLPNILSEISRVYRTRILNRIDWLKNIIPVVLLIIVAGGITACYTIIVFLPFVEILKMLGSPT 367          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517XK83_9PLAN (Type II secretion system protein F n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517XK83_9PLAN)

HSP 1 Score: 169 bits (427), Expect = 2.390e-48
Identity = 80/141 (56.74%), Postives = 109/141 (77.30%), Query Frame = 0
Query:    1 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 141
            MNYSTF +M  +LLSYH+PL +SLVLAAE TGNSK+I + + ++ KL+ G  +   ++++   P +I+ ML+   HQN L  I SE++RVY+TRV NRI+W K I+PV L+VL+AGGIT CYA++VFLPF+E+LKMLGSPS
Sbjct:  253 MNYSTFTKMVSILLSYHVPLHESLVLAAESTGNSKLITESKLLSAKLKHGSSLPDVVRNSDFYPSFIKKMLIKNVHQNHLVRIFSEMSRVYKTRVSNRIDWAKRIIPVSLLVLIAGGITACYAIIVFLPFIELLKMLGSPS 393          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A2E2BWI3_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BWI3_9PLAN)

HSP 1 Score: 167 bits (422), Expect = 6.090e-48
Identity = 79/141 (56.03%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    1 MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 141
            MN+STF +M  +LLSYH+PL ++LVLAA  TGNSK+I++   +++KL+ G  +   IQ++   P YI+ ML+  AHQN L  I SEI+RVYQ+RV NRI+W+K I+P+ L+V+VAGGIT  YA++VFLPF+E+LKMLGSP+
Sbjct:  219 MNFSTFTKMISILLSYHVPLHEALVLAAGSTGNSKLISESELLSKKLKSGSSLPDGIQNSEYFPSYIKKMLIKDAHQNHLVRIFSEISRVYQSRVSNRIDWVKRILPISLLVIVAGGITASYAIIVFLPFIELLKMLGSPT 359          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A2E7D8G4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D8G4_9PLAN)

HSP 1 Score: 91.7 bits (226), Expect = 3.060e-19
Identity = 40/136 (29.41%), Postives = 85/136 (62.50%), Query Frame = 0
Query:    4 STFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGS 139
            + FA++  +L+ + +PL+++  LAA  TG  + ++   ++ ++L++G+ +  S++    +P ++  M+++   Q  +P  + +IA +Y+ R   + +W K +VP+ L+V+VAGG T+ YAL +F P  E+L+ L +
Sbjct:  214 ANFADLLSMLIGHQVPLAEAFSLAARATGRERFVSAAETIGKRLKEGKSLTDSLKGVDAIPSFMAWMMVSAEAQASMPRTLKQIADLYRRRAAFQADWFKMMVPIFLIVIVAGGATLLYALSLFAPLSELLRRLDA 349          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517ZHB1_9PLAN (Type II secretion system protein F n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZHB1_9PLAN)

HSP 1 Score: 90.1 bits (222), Expect = 1.240e-18
Identity = 43/137 (31.39%), Postives = 80/137 (58.39%), Query Frame = 0
Query:    4 STFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSP 140
            + F+++ G+L    +PL   ++LAA+ TG+ +MI     ++ KL+ GE +  +++SA   P Y++ ++     Q  L D ++  A VY++R L R+E +   +P+  V ++ GG T+ YA  +F P +E L+ L +P
Sbjct:  223 ANFSDLLGLLTEQEVPLHTGILLAADSTGDRRMIQSSEEISLKLQSGESLAEAMESAKAYPSYLRWLMQTGEQQRTLADSLTRAAGVYRSRALERLETLSLALPLIAVAVIGGGATLIYAFALFAPMIESLRNLAAP 359          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A6I6ADI7_9PLAN (T2SSF domain-containing protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ADI7_9PLAN)

HSP 1 Score: 82.8 bits (203), Expect = 6.050e-16
Identity = 41/138 (29.71%), Postives = 73/138 (52.90%), Query Frame = 0
Query:    3 YSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSP 140
            Y  FAE+  +L+   IP S+S+VLAAE TG+ +++     +A++  + +   G        P  +  +L    H+  L   +   A +Y+ +  +   W + I P+    ++ GG  +CY L++FLPF ++LK LG+P
Sbjct:  225 YGNFAELMALLIQQQIPFSESIVLAAEATGDDQLVQSAELMADRHARSQLESGESAKFYGWPPLLTWLLTTKNHEGELSLALKNAADMYRRKAAHYTRWFRVIFPIFTGAIIGGGTVLCYCLVLFLPFTDMLKQLGNP 362          
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A518I4S4_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I4S4_9PLAN)

HSP 1 Score: 79.3 bits (194), Expect = 1.090e-14
Identity = 39/138 (28.26%), Postives = 73/138 (52.90%), Query Frame = 0
Query:    3 YSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSP 140
            Y  F+E+  +L+  +IP ++S+VLAAE TG+ +++     +AE+    +   G        P  +  +L    HQ  L   +   A +Y+ +  +   W + + P+    ++ GG  +CY+L++FLPF ++LK L +P
Sbjct:  225 YGNFSELMSLLIQQNIPFAESIVLAAEATGDDQLVKSANLMAERHLSSQFETGDTTKEYGWPPLLTWLLTTKNHQGELSLALKNAADMYRRKATHYTRWFRVLFPIFTGTIIGGGAVLCYSLVLFLPFSDMLKQLANP 362          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A517PY77_9PLAN6.950e-90100.00Type II secretion system protein F n=8 Tax=Gimesia... [more]
A0A518AFM3_9PLAN1.430e-6875.89Type II secretion system protein F n=4 Tax=Gimesia... [more]
A0A518IL68_9PLAN2.410e-5260.28Type II secretion system protein F n=2 Tax=Gimesia... [more]
A0A517VNY5_9PLAN2.690e-5158.87Type II secretion system protein F n=2 Tax=Gimesia... [more]
A0A517XK83_9PLAN2.390e-4856.74Type II secretion system protein F n=5 Tax=Gimesia... [more]
A0A2E2BWI3_9PLAN6.090e-4856.03Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A2E7D8G4_9PLAN3.060e-1929.41Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A517ZHB1_9PLAN1.240e-1831.39Type II secretion system protein F n=3 Tax=Symmach... [more]
A0A6I6ADI7_9PLAN6.050e-1629.71T2SSF domain-containing protein n=7 Tax=Gimesia Ta... [more]
A0A518I4S4_9PLAN1.090e-1428.26Type II secretion system protein F n=2 Tax=Gimesia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042094Type II secretion system F domain superfamilyGENE3D1.20.81.30coord: 1..104
e-value: 3.8E-10
score: 41.5
IPR018076Type II secretion system F domainPFAMPF00482T2SSFcoord: 6..126
e-value: 1.7E-10
score: 40.9
IPR003004GspF/PilC familyPANTHERPTHR30012GENERAL SECRETION PATHWAY PROTEINcoord: 3..137
NoneNo IPR availablePANTHERPTHR30012:SF0TYPE II SECRETION SYSTEM PROTEIN F-RELATEDcoord: 3..137
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..142
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118764contigM-pyrifera_M_contig118764:103..531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118764.3862.1mRNA_M-pyrifera_M_contig118764.3862.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118764 103..546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118764.3862.1 ID=prot_M-pyrifera_M_contig118764.3862.1|Name=mRNA_M-pyrifera_M_contig118764.3862.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQG
EGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIE
WIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042094T2SS_F_sf
IPR018076T2SS_F
IPR003004GspF/PilC