mRNA_M-pyrifera_M_contig118764.3862.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517PY77_9PLAN (Type II secretion system protein F n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517PY77_9PLAN) HSP 1 Score: 284 bits (727), Expect = 9.810e-94 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
Query: 1 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV 441
RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV
Sbjct: 222 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPSV 368
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A518AFM3_9PLAN (Type II secretion system protein F n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFM3_9PLAN) HSP 1 Score: 226 bits (576), Expect = 6.730e-71 Identity = 109/146 (74.66%), Postives = 132/146 (90.41%), Query Frame = 1
Query: 1 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 438
+L+ DMNYSTF+EMAGVLLSYH+PL+DSL+LAAE TGN K+I QFRSVAEKLEQG + SIQSA + P Y++SM++NPAHQN+LP +M+E+ARVY+TR LNR+EWIK+I+PV LVVLVAGGIT+CYAL+VFLPFVEILKMLGSPS
Sbjct: 222 KLIQDMNYSTFSEMAGVLLSYHVPLTDSLILAAESTGNPKLITQFRSVAEKLEQGASLGVSIQSAGQFPEYVKSMMVNPAHQNQLPGVMTEMARVYRTRALNRMEWIKHILPVALVVLVAGGITICYALIVFLPFVEILKMLGSPS 367
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A518IL68_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IL68_9PLAN) HSP 1 Score: 182 bits (462), Expect = 9.330e-54 Identity = 87/145 (60.00%), Postives = 115/145 (79.31%), Query Frame = 1
Query: 4 LVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 438
LV +MNYSTFAEM+G+LL+Y +PL +SL LAAE TGN+K+I + S++ L +G ++ IQS + P +I+ M+M HQN LP IMSEIARVY+ RVLNRI+WIK I+PV L++++AGGIT CY L+VF+PFVEILKMLGSP+
Sbjct: 223 LVREMNYSTFAEMSGILLTYDVPLHESLTLAAESTGNTKIITESHSLSRLLVRGTSLKEGIQSCKQFPDFIKLMMMEKTHQNHLPQIMSEIARVYRARVLNRIDWIKRIIPVTLLIVIAGGITACYTLIVFIPFVEILKMLGSPT 367
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517VNY5_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VNY5_9PLAN) HSP 1 Score: 179 bits (455), Expect = 1.040e-52 Identity = 84/146 (57.53%), Postives = 116/146 (79.45%), Query Frame = 1
Query: 1 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 438
L+ +MNYSTF EM +LLSY++PL+++ LAAE TG+SK+I +S+ LEQG +E IQS P +I++M+M +QN LP+I+SEI+RVY+TR+LNRI+W+KNI+PV L+++VAGGIT CY ++VFLPFVEILKMLGSP+
Sbjct: 222 NLIREMNYSTFTEMTSLLLSYNVPLTEAFTLAAESTGSSKVIADTKSLTNLLEQGVSLEEGIQSCRHFPVFIKTMIMEKTYQNHLPNILSEISRVYRTRILNRIDWLKNIIPVVLLIIVAGGITACYTIIVFLPFVEILKMLGSPT 367
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517XK83_9PLAN (Type II secretion system protein F n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517XK83_9PLAN) HSP 1 Score: 176 bits (445), Expect = 6.050e-51 Identity = 82/146 (56.16%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 438
+L+L+MNYSTF +M +LLSYH+PL +SLVLAAE TGNSK+I + + ++ KL+ G + ++++ P +I+ ML+ HQN L I SE++RVY+TRV NRI+W K I+PV L+VL+AGGIT CYA++VFLPF+E+LKMLGSPS
Sbjct: 248 KLILEMNYSTFTKMVSILLSYHVPLHESLVLAAESTGNSKLITESKLLSAKLKHGSSLPDVVRNSDFYPSFIKKMLIKNVHQNHLVRIFSEMSRVYKTRVSNRIDWAKRIIPVSLLVLIAGGITACYAIIVFLPFIELLKMLGSPS 393
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A2E2BWI3_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BWI3_9PLAN) HSP 1 Score: 171 bits (434), Expect = 1.190e-49 Identity = 80/146 (54.79%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSPS 438
+L+ +MN+STF +M +LLSYH+PL ++LVLAA TGNSK+I++ +++KL+ G + IQ++ P YI+ ML+ AHQN L I SEI+RVYQ+RV NRI+W+K I+P+ L+V+VAGGIT YA++VFLPF+E+LKMLGSP+
Sbjct: 214 KLISEMNFSTFTKMISILLSYHVPLHEALVLAAGSTGNSKLISESELLSKKLKSGSSLPDGIQNSEYFPSYIKKMLIKDAHQNHLVRIFSEISRVYQSRVSNRIDWVKRILPISLLVIVAGGITASYAIIVFLPFIELLKMLGSPT 359
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A2E7D8G4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D8G4_9PLAN) HSP 1 Score: 92.8 bits (229), Expect = 1.350e-19 Identity = 40/143 (27.97%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 4 LVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGS 432
++ + + + FA++ +L+ + +PL+++ LAA TG + ++ ++ ++L++G+ + S++ +P ++ M+++ Q +P + +IA +Y+ R + +W K +VP+ L+V+VAGG T+ YAL +F P E+L+ L +
Sbjct: 207 ILRNYHLANFADLLSMLIGHQVPLAEAFSLAARATGRERFVSAAETIGKRLKEGKSLTDSLKGVDAIPSFMAWMMVSAEAQASMPRTLKQIADLYRRRAAFQADWFKMMVPIFLIVIVAGGATLLYALSLFAPLSELLRRLDA 349
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A517ZHB1_9PLAN (Type II secretion system protein F n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZHB1_9PLAN) HSP 1 Score: 90.9 bits (224), Expect = 7.610e-19 Identity = 43/141 (30.50%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 13 DMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSP 435
+ + F+++ G+L +PL ++LAA+ TG+ +MI ++ KL+ GE + +++SA P Y++ ++ Q L D ++ A VY++R L R+E + +P+ V ++ GG T+ YA +F P +E L+ L +P
Sbjct: 219 NQQLANFSDLLGLLTEQEVPLHTGILLAADSTGDRRMIQSSEEISLKLQSGESLAEAMESAKAYPSYLRWLMQTGEQQRTLADSLTRAAGVYRSRALERLETLSLALPLIAVAVIGGGATLIYAFALFAPMIESLRNLAAP 359
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A6I6ADI7_9PLAN (T2SSF domain-containing protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ADI7_9PLAN) HSP 1 Score: 84.3 bits (207), Expect = 1.950e-16 Identity = 42/145 (28.97%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 1 RLVLDMNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSP 435
R+ Y FAE+ +L+ IP S+S+VLAAE TG+ +++ +A++ + + G P + +L H+ L + A +Y+ + + W + I P+ ++ GG +CY L++FLPF ++LK LG+P
Sbjct: 218 RIASYYRYGNFAELMALLIQQQIPFSESIVLAAEATGDDQLVQSAELMADRHARSQLESGESAKFYGWPPLLTWLLTTKNHEGELSLALKNAADMYRRKAAHYTRWFRVIFPIFTGAIIGGGTVLCYCLVLFLPFTDMLKQLGNP 362
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Match: A0A518I4S4_9PLAN (Type II secretion system protein F n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I4S4_9PLAN) HSP 1 Score: 79.7 bits (195), Expect = 9.290e-15 Identity = 39/138 (28.26%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 22 YSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGEGIEGSIQSAAELPGYIQSMLMNPAHQNRLPDIMSEIARVYQTRVLNRIEWIKNIVPVGLVVLVAGGITVCYALLVFLPFVEILKMLGSP 435
Y F+E+ +L+ +IP ++S+VLAAE TG+ +++ +AE+ + G P + +L HQ L + A +Y+ + + W + + P+ ++ GG +CY+L++FLPF ++LK L +P
Sbjct: 225 YGNFSELMSLLIQQNIPFAESIVLAAEATGDDQLVKSANLMAERHLSSQFETGDTTKEYGWPPLLTWLLTTKNHQGELSLALKNAADMYRRKATHYTRWFRVLFPIFTGTIIGGGAVLCYSLVLFLPFSDMLKQLANP 362 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118764.3862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118764.3862.1 >prot_M-pyrifera_M_contig118764.3862.1 ID=prot_M-pyrifera_M_contig118764.3862.1|Name=mRNA_M-pyrifera_M_contig118764.3862.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp MNYSTFAEMAGVLLSYHIPLSDSLVLAAECTGNSKMINQFRSVAEKLEQGback to top mRNA from alignment at M-pyrifera_M_contig118764:103..546- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118764.3862.1 ID=mRNA_M-pyrifera_M_contig118764.3862.1|Name=mRNA_M-pyrifera_M_contig118764.3862.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig118764:103..546- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118764:103..546- >mRNA_M-pyrifera_M_contig118764.3862.1 ID=mRNA_M-pyrifera_M_contig118764.3862.1|Name=mRNA_M-pyrifera_M_contig118764.3862.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig118764:103..546- (Macrocystis pyrifera P11B4 male)back to top |