mRNA_M-pyrifera_M_contig118760.3861.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118760.3861.1
Unique NamemRNA_M-pyrifera_M_contig118760.3861.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A517WID6_9PLAN (Arylsulfatase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WID6_9PLAN)

HSP 1 Score: 304 bits (779), Expect = 4.540e-100
Identity = 148/153 (96.73%), Postives = 152/153 (99.35%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSLASAKSS 459
            HGLRGKQNMYEHTINVP+IIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPK+VEGKSLKPVLTGKQ+EIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLS DPAH+QTRDALLRRLNDWRKSQNDKSLASAKSS
Sbjct:  325 HGLRGKQNMYEHTINVPMIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKSVEGKSLKPVLTGKQEEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSEDPAHRQTRDALLRRLNDWRKSQNDKSLASAKSS 477          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A518FUS3_9PLAN (Arylsulfatase n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FUS3_9PLAN)

HSP 1 Score: 280 bits (716), Expect = 1.440e-90
Identity = 132/153 (86.27%), Postives = 144/153 (94.12%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSLASAKSS 459
            HGLRGKQNMYEHTINVPL++VGPG+PA+QRSAAQCYLRDLYPTSCDLAG+PIPKTVEGKSLKPVL GKQD +Y+E++GYFRDFQRMIR DRWKLILYPH+DRVQLFDL+NDPLEMHDLS DPAHQQ RD LL RLN WRKSQ+DKSL SAKSS
Sbjct:  325 HGLRGKQNMYEHTINVPLVMVGPGIPANQRSAAQCYLRDLYPTSCDLAGVPIPKTVEGKSLKPVLMGKQDAVYDEVFGYFRDFQRMIRDDRWKLILYPHIDRVQLFDLKNDPLEMHDLSKDPAHQQKRDELLNRLNAWRKSQHDKSLTSAKSS 477          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A517RKX4_9PLAN (Arylsulfatase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RKX4_9PLAN)

HSP 1 Score: 260 bits (665), Expect = 6.840e-83
Identity = 123/153 (80.39%), Postives = 138/153 (90.20%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSLASAKSS 459
            HGLRGKQNMYEHT+ VPLI+VGPG+PAD+RSAAQCYLRDLYPTSCDLAG+PIPKTVE KSLKPVLTG ++ IY+E+Y YFR+FQRMIRTDRWKLI+YPHL+RVQLFDL+ DPLE HDLS  P HQQ RD+L R+LNDWRK QND SLASAK S
Sbjct:  325 HGLRGKQNMYEHTVGVPLIMVGPGIPADKRSAAQCYLRDLYPTSCDLAGVPIPKTVEAKSLKPVLTGDKEAIYDEVYCYFRNFQRMIRTDRWKLIVYPHLNRVQLFDLKQDPLEQHDLSQAPQHQQVRDSLHRKLNDWRKEQNDASLASAKKS 477          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A517XGY4_9PLAN (Arylsulfatase n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XGY4_9PLAN)

HSP 1 Score: 253 bits (646), Expect = 5.160e-80
Identity = 118/147 (80.27%), Postives = 132/147 (89.80%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSL 441
            HGLRGKQNMYEHT+NVPLI+VGPG+PAD  S AQCYLRDLYPTSCDLAG+PIPKTVEGKSLKPVL+G+QD +Y+E+Y YFR+FQRMIRTDRWKLI YPHLDRVQLFDL+NDPLE HDLS + AHQQ R  LL +LNDWRK Q+D SL
Sbjct:  326 HGLRGKQNMYEHTVNVPLIMVGPGIPADTLSNAQCYLRDLYPTSCDLAGVPIPKTVEGKSLKPVLSGQQDAVYDEVYCYFRNFQRMIRTDRWKLIYYPHLDRVQLFDLKNDPLEQHDLSGEAAHQQVRGKLLDQLNDWRKQQDDPSL 472          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A2E2BZD5_9PLAN (Choline-sulfatase n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BZD5_9PLAN)

HSP 1 Score: 252 bits (643), Expect = 1.460e-79
Identity = 118/147 (80.27%), Postives = 131/147 (89.12%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSL 441
            HGLRGKQNMYEHT+NVPLI+VGPG+PAD RS AQCYLRDLYPTSCDLAG+PIP TVEGKSLKPVLTG QD IY+E++ YFR+FQRMIRTDRWKLI YPHLDRVQLFDL+ DPLE+HDLS + AHQQ RD LL +LN WRK Q+D SL
Sbjct:  326 HGLRGKQNMYEHTVNVPLIMVGPGIPADVRSNAQCYLRDLYPTSCDLAGVPIPNTVEGKSLKPVLTGAQDAIYDEVFCYFRNFQRMIRTDRWKLIYYPHLDRVQLFDLKEDPLELHDLSGEAAHQQVRDKLLNQLNAWRKQQDDPSL 472          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A517WR75_9PLAN (Arylsulfatase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WR75_9PLAN)

HSP 1 Score: 244 bits (623), Expect = 1.420e-76
Identity = 116/153 (75.82%), Postives = 133/153 (86.93%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSLASAKSS 459
            HGLRGKQ+MYEHTI VPLI+VGPG+PADQR AAQCYLRDLYPTSCDLAG+ IP +VEGKSLKPV+TG++  IY E+YGYFR++QRMIRTDRWKLI+YPHL RVQLFDL+ DPLE+HDLS D  H +T   L +RLN W+K QND SLASAKSS
Sbjct:  326 HGLRGKQSMYEHTIGVPLIMVGPGIPADQRKAAQCYLRDLYPTSCDLAGVAIPSSVEGKSLKPVITGEKAAIYNEVYGYFRNYQRMIRTDRWKLIVYPHLKRVQLFDLKQDPLELHDLSQDATHTKTLSKLQQRLNAWQKQQNDPSLASAKSS 478          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A2E7D4Z4_9PLAN (Choline-sulfatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D4Z4_9PLAN)

HSP 1 Score: 197 bits (501), Expect = 1.880e-58
Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQND 432
            HGLRGKQ+MYEHTI VP I+ GPGVP  ++SAAQCYLRDLYPT+CDLAGI IPKTV+ KSLKPVL GK D++ + +YGYFR FQRMIRTD WKLI YP + R QLF L++DP E+ +L++DP +Q+    L +RL  W++ Q D
Sbjct:  321 HGLRGKQSMYEHTIGVPYILSGPGVPKGKQSAAQCYLRDLYPTTCDLAGIAIPKTVQAKSLKPVLDGKTDKVRDAVYGYFRKFQRMIRTDEWKLIEYPEIQRTQLFHLKSDPHELKNLASDPNYQKITTELRQRLKSWQREQGD 464          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: UPI0013DAFCCB (sulfatase-like hydrolase/transferase n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DAFCCB)

HSP 1 Score: 197 bits (502), Expect = 2.110e-58
Identity = 92/138 (66.67%), Postives = 111/138 (80.43%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDW 414
            HGLRGKQNMYEHTINVPLI  GPG+PA +  AAQCYLRDL+PT+C+LAG+P+PK+V+GKSL PVL G+ DEIY  I GYF D QRMIRTDRWK I YP ++  QLFDLQND  E+H+L+A P+H + R  L ++L DW
Sbjct:  338 HGLRGKQNMYEHTINVPLIFAGPGIPAGETRAAQCYLRDLFPTTCELAGVPVPKSVQGKSLVPVLHGQTDEIYPFIVGYFGDSQRMIRTDRWKYIWYPQINHEQLFDLQNDRDELHNLAAAPSHTRRRSELRQQLLDW 475          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A382N892_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382N892_9ZZZZ)

HSP 1 Score: 188 bits (477), Expect = 2.610e-58
Identity = 90/142 (63.38%), Postives = 106/142 (74.65%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQT----RDALLRRLNDW 414
            HGL GKQNMYEHTI VPL+I GPG+P  +++ A CYLRDLYPT CDL G+PIPK VEG+SLKPVL GK D +Y EIYGYFRD QRM+R  R KLI YPH+DR QLFDL +DPLE  DL  D AH +     ++ L R++  W
Sbjct:   28 HGLMGKQNMYEHTIRVPLVIAGPGLPEGKQNNALCYLRDLYPTICDLVGLPIPKGVEGRSLKPVLRGKADSVYSEIYGYFRDKQRMVRDKRRKLIHYPHIDRYQLFDLHDDPLERKDLIGDEAHAEVVRRLKEKLSRKMKVW 169          
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Match: A0A2D5S8J7_9PLAN (Choline-sulfatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5S8J7_9PLAN)

HSP 1 Score: 196 bits (497), Expect = 8.230e-58
Identity = 90/144 (62.50%), Postives = 111/144 (77.08%), Query Frame = 1
Query:    1 HGLRGKQNMYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEGKSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDLQNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQND 432
            HGL GKQNMYEHTI VP II GPG+P  QR+ AQ YLRD+YPT+C+LAGIPIP++VE KSL P+L G   +IY  IYGYF  +QRMIRTDRWKLI YPHL++ QLFDLQNDP E  DLS+   H++   +L R++++W + Q D
Sbjct:  327 HGLMGKQNMYEHTIGVPFIIAGPGIPQGQRTKAQIYLRDMYPTTCELAGIPIPESVESKSLVPILQGTASQIYPVIYGYFHKYQRMIRTDRWKLISYPHLNKYQLFDLQNDPTEQMDLSSQSEHRKVMASLTRKMDEWFRKQGD 470          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118760.3861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WID6_9PLAN4.540e-10096.73Arylsulfatase n=6 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A518FUS3_9PLAN1.440e-9086.27Arylsulfatase n=2 Tax=Gimesia panareensis TaxID=25... [more]
A0A517RKX4_9PLAN6.840e-8380.39Arylsulfatase n=2 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A517XGY4_9PLAN5.160e-8080.27Arylsulfatase n=7 Tax=Planctomycetaceae TaxID=126 ... [more]
A0A2E2BZD5_9PLAN1.460e-7980.27Choline-sulfatase n=4 Tax=Planctomycetaceae TaxID=... [more]
A0A517WR75_9PLAN1.420e-7675.82Arylsulfatase n=2 Tax=Gimesia aquarii TaxID=252796... [more]
A0A2E7D4Z4_9PLAN1.880e-5863.89Choline-sulfatase n=1 Tax=Planctomycetaceae bacter... [more]
UPI0013DAFCCB2.110e-5866.67sulfatase-like hydrolase/transferase n=1 Tax=Candi... [more]
A0A382N892_9ZZZZ2.610e-5863.38Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A2D5S8J7_9PLAN8.230e-5862.50Choline-sulfatase n=1 Tax=Planctomycetaceae bacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118760contigM-pyrifera_M_contig118760:86..547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score235.3
Seed ortholog evalue1.8e-59
Seed eggNOG ortholog344747.PM8797T_19904
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sulfatase
EggNOG OGs2J39Z@203682,COG3119@1,COG3119@2
COG Functional cat.P
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size462
Cds size438
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815706.6204677-CDS-M-pyrifera_M_contig118760:85..5231622815706.6204677-CDS-M-pyrifera_M_contig118760:85..523Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118760 86..523 -
1692277531.3029377-CDS-M-pyrifera_M_contig118760:85..5231692277531.3029377-CDS-M-pyrifera_M_contig118760:85..523Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118760 86..523 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815706.6305559-UTR-M-pyrifera_M_contig118760:523..5471622815706.6305559-UTR-M-pyrifera_M_contig118760:523..547Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig118760 524..547 -
1692277531.312357-UTR-M-pyrifera_M_contig118760:523..5471692277531.312357-UTR-M-pyrifera_M_contig118760:523..547Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig118760 524..547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118760.3861.1prot_M-pyrifera_M_contig118760.3861.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118760 86..523 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118760.3861.1

>prot_M-pyrifera_M_contig118760.3861.1 ID=prot_M-pyrifera_M_contig118760.3861.1|Name=mRNA_M-pyrifera_M_contig118760.3861.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
MYEHTINVPLIIVGPGVPADQRSAAQCYLRDLYPTSCDLAGIPIPKTVEG
KSLKPVLTGKQDEIYEEIYGYFRDFQRMIRTDRWKLILYPHLDRVQLFDL
QNDPLEMHDLSADPAHQQTRDALLRRLNDWRKSQNDKSLASAKSS*
back to top

mRNA from alignment at M-pyrifera_M_contig118760:86..547-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118760.3861.1 ID=mRNA_M-pyrifera_M_contig118760.3861.1|Name=mRNA_M-pyrifera_M_contig118760.3861.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig118760:86..547- (Macrocystis pyrifera P11B4 male)
CACGGACTGCGGGGCAAACAGAACATGTACGAACACACGATCAACGTTCC GCTGATCATCGTCGGTCCCGGTGTCCCCGCCGATCAGCGCTCGGCCGCGC AGTGCTATCTCCGCGATCTCTATCCCACCAGTTGTGACCTCGCAGGCATC CCCATACCCAAAACGGTCGAAGGTAAAAGTCTGAAGCCGGTCCTCACAGG GAAGCAGGATGAGATCTACGAGGAAATCTATGGCTACTTCCGCGACTTCC AGCGCATGATCCGCACCGACCGCTGGAAGCTGATCCTCTATCCGCACCTC GATCGGGTCCAGCTCTTCGATCTTCAGAACGACCCGCTGGAGATGCACGA CCTCTCCGCGGACCCCGCTCATCAACAGACCCGCGATGCTCTGCTCCGTC GCCTGAACGACTGGCGGAAGTCTCAGAACGACAAGTCGCTCGCTTCGGCA AAATCTTCCTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig118760:86..547-

>mRNA_M-pyrifera_M_contig118760.3861.1 ID=mRNA_M-pyrifera_M_contig118760.3861.1|Name=mRNA_M-pyrifera_M_contig118760.3861.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig118760:86..547- (Macrocystis pyrifera P11B4 male)
ATGTACGAACACACGATCAACGTTCCGCTGATCATCGTCGGTCCCGGTGT
CCCCGCCGATCAGCGCTCGGCCGCGCAGTGCTATCTCCGCGATCTCTATC
CCACCAGTTGTGACCTCGCAGGCATCCCCATACCCAAAACGGTCGAAGGT
AAAAGTCTGAAGCCGGTCCTCACAGGGAAGCAGGATGAGATCTACGAGGA
AATCTATGGCTACTTCCGCGACTTCCAGCGCATGATCCGCACCGACCGCT
GGAAGCTGATCCTCTATCCGCACCTCGATCGGGTCCAGCTCTTCGATCTT
CAGAACGACCCGCTGGAGATGCACGACCTCTCCGCGGACCCCGCTCATCA
ACAGACCCGCGATGCTCTGCTCCGTCGCCTGAACGACTGGCGGAAGTCTC
AGAACGACAAGTCGCTCGCTTCGGCAAAATCTTCCTGAATGTACGAACAC
ACGATCAACGTTCCGCTGATCATCGTCGGTCCCGGTGTCCCCGCCGATCA
GCGCTCGGCCGCGCAGTGCTATCTCCGCGATCTCTATCCCACCAGTTGTG
ACCTCGCAGGCATCCCCATACCCAAAACGGTCGAAGGTAAAAGTCTGAAG
CCGGTCCTCACAGGGAAGCAGGATGAGATCTACGAGGAAATCTATGGCTA
CTTCCGCGACTTCCAGCGCATGATCCGCACCGACCGCTGGAAGCTGATCC
TCTATCCGCACCTCGATCGGGTCCAGCTCTTCGATCTTCAGAACGACCCG
CTGGAGATGCACGACCTCTCCGCGGACCCCGCTCATCAACAGACCCGCGA
TGCTCTGCTCCGTCGCCTGAACGACTGGCGGAAGTCTCAGAACGACAAGT
CGCTCGCTTCGGCAAAATCTTCCTGA
back to top