prot_M-pyrifera_M_contig118722.3853.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118722.3853.1
Unique Nameprot_M-pyrifera_M_contig118722.3853.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A0D2UGI3_CAPO3 (SMC hinge domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UGI3_CAPO3)

HSP 1 Score: 149 bits (375), Expect = 2.950e-38
Identity = 78/178 (43.82%), Postives = 120/178 (67.42%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKISAVQSELK 178
            MKEQ +G  TF+PL+ IS KP +EQLR +  S +L+LDV++ E ++R A  +ACGN VVC+ L EA+   FG+   +RLK+VT+ G  IHKSG++TGGL   ++ RA  W+Q+++EKLK++RD+L  E+ E+ R     +  + L AQ  G++TR K+   + Q+  EK+ A + +L+
Sbjct:  397 MKEQHIGMMTFLPLDGISVKPTDEQLRALGGSCRLLLDVIQCEPSVRRALQFACGNAVVCDTLQEARETTFGK--NQRLKIVTLDGTCIHKSGLITGGLGG-IDGRANRWDQQEVEKLKRERDNLTTELTELSRKRRKAADLENLRAQLNGMETRNKYLKSEAQVNREKVLAAEKDLQ 571          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: L8H1I6_ACACA (Structural maintenance of chromosomes protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1I6_ACACA)

HSP 1 Score: 141 bits (356), Expect = 1.060e-35
Identity = 78/179 (43.58%), Postives = 124/179 (69.27%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQ---IDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKISAVQSE 176
            +KEQR+GTATF+PL ++  KP++E+LR      +S KL++D+++F++ ++ A +YA GNTV C+ L EAK+LAF R   + L+ V+  G +I KSG+MTGG    + A+AK+W++K +E LKK+RD  + E+ EV R L   +REQ+L +Q  G+Q RL    +DL +T++K++  + E
Sbjct:  567 LKEQRVGTATFLPLSSLKVKPIHERLRNQLATSKSAKLIIDLLKFDSRIQKAVLYAVGNTVYCDTLDEAKTLAFDRA--QPLRTVSKNGTLIRKSGLMTGG--PGIGAKAKKWDEKKVEGLKKKRDKYITELQEVGRTLRGVTREQQLTSQTQGLQGRLDNFKIDLGLTKDKLTRTREE 741          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: UPI00077A1896 (structural maintenance of chromosomes protein 1A-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1896)

HSP 1 Score: 138 bits (348), Expect = 1.090e-34
Identity = 73/168 (43.45%), Postives = 119/168 (70.83%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFEN-ALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITE 167
            ++EQR     F+PL+ I  KPVNE+LRQI  S KL++DVVRFE   ++ A  +ACGN++VC+ + EA+ LAFG  G ER K V++ G++  KSG+++GG+S  ++A+A+ W++K ++ LK++RDSL++E+ E+ +H   +   Q L +Q  G++ RL+++T D + TE
Sbjct:  243 LREQRAEPEMFLPLDGIQVKPVNEKLRQIGGSAKLIIDVVRFEPPVIKRALQFACGNSLVCDGMEEARKLAFG--GAERKKTVSLDGILFQKSGVISGGVSD-LKAKARRWDEKQVDGLKRKRDSLLSELKELSKHRRKEPELQNLRSQIDGLEHRLRYSTKDKETTE 407          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: UPI001CF5CE29 (structural maintenance of chromosomes protein 1A-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF5CE29)

HSP 1 Score: 138 bits (348), Expect = 1.260e-34
Identity = 73/168 (43.45%), Postives = 119/168 (70.83%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFEN-ALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITE 167
            ++EQR     F+PL+ I  KPVNE+LRQI  S KL++DVVRFE   ++ A  +ACGN++VC+ + EA+ LAFG  G ER K V++ G++  KSG+++GG+S  ++A+A+ W++K ++ LK++RDSL++E+ E+ +H   +   Q L +Q  G++ RL+++T D + TE
Sbjct:  557 LREQRAEPEMFLPLDGIQVKPVNEKLRQIGGSAKLIIDVVRFEPPVIKRALQFACGNSLVCDGMEEARKLAFG--GAERKKTVSLDGILFQKSGVISGGVSD-LKAKARRWDEKQVDGLKRKRDSLLSELKELSKHRRKEPELQNLRSQIDGLEHRLRYSTKDKETTE 721          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A6U9R7I1_9CHLO (Structural maintenance of chromosomes protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9R7I1_9CHLO)

HSP 1 Score: 134 bits (338), Expect = 2.780e-33
Identity = 73/177 (41.24%), Postives = 116/177 (65.54%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKISAVQSEL 177
            +KEQR+   TF+PL TI  KPVNE+LR +  + +LVLDV+ ++     A +YACG TVVC+ + EAK L F  P  ERLKVV+  G +IHKSGM+TGG++  +EARA  +  + +E ++++R     E+ E+      + +EQ+L  +  G++ ++++  VD ++T+EKI  V+ E+
Sbjct:  569 LKEQRIPPMTFLPLATILTKPVNERLRTLGGTSRLVLDVLDYDPQYERAMIYACGGTVVCDRIEEAKRLGFSGP--ERLKVVSTDGTLIHKSGMITGGVTGGLEARASRFNAQAVEGIQQERARYTKELQEISGGRVVQVQEQELNTRIDGLEKKIQYIEVDHKVTQEKIEKVKGEV 743          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A453RVU6_AEGTS (SMC hinge domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453RVU6_AEGTS)

HSP 1 Score: 132 bits (332), Expect = 6.060e-33
Identity = 70/162 (43.21%), Postives = 109/162 (67.28%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVD 162
            +KEQRL   TFIPL++I  KP+ E+LR +  S +L+ DV++F+ AL  A +YA GNT+VC+ L EAK+L++     ER KVVTV G+++ KSG MTGG+S  MEAR+ +W+   +E LKK++  L AEM+E+      + +E  +  +  G++ +L ++ V+
Sbjct:   94 LKEQRLPPQTFIPLQSIRVKPITERLRTLGGSAQLIFDVIQFDRALEKAVLYAVGNTLVCDKLDEAKTLSWSG---ERYKVVTVDGILLTKSGTMTGGVSGGMEARSNKWDDSRIESLKKKKSKLEAEMSELGSPRELQRKELAVSEKITGLEKKLHYSNVE 252          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A1Y1YY57_9FUNG (Structural maintenance of chromosomes protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YY57_9FUNG)

HSP 1 Score: 133 bits (335), Expect = 7.030e-33
Identity = 69/173 (39.88%), Postives = 118/173 (68.21%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKISAV 173
            M+EQR+G ATF+PL+T+  KP+N++ R   +  +L +DV++ E  L  A  YACGN ++C+ L+ AK + + R GQE +K VT+ G +IHKSG++TGG  S + + A  WE+K++E LK+ RDSL +++ E+ R     S E++ +++ +G+++RL+F   D   T+ K++++
Sbjct:  528 MREQRVGQATFLPLDTLVIKPINDKYRSFAKGARLAIDVIQHEAYLERALQYACGNALICDTLSVAKYICYER-GQE-VKTVTLDGTIIHKSGLITGG-QSGLSSGAHRWEEKEIENLKRARDSLFSQLNELGRSKRRISNEEQYKSEISGLESRLEFTREDFNATKRKLASI 697          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A2P6NQN7_9EUKA (Structural maintenance of chromosomes protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQN7_9EUKA)

HSP 1 Score: 133 bits (334), Expect = 9.620e-33
Identity = 71/171 (41.52%), Postives = 115/171 (67.25%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKIS 171
            ++EQR    TFIP++ I  K V ++LR++  ++K VLDV+ F+     A +Y  G+T+VC+ L +A+ LAF  P ++R KVVT+GGV+I KSG+MT   S+  + R+  W  + ++ LKKQRD+L+ E+ E+ R L +   EQ+  +Q + +  R+K+AT+DL +T+EKI+
Sbjct:  593 LREQRAMVCTFIPIDDIQVKSVEDRLRKLGHNIKPVLDVINFDPMFEKAMLYVVGSTLVCDTLDQARRLAFDDP-RDRKKVVTLGGVLIAKSGLMT---SNGKQTRSNVWNDRRIDDLKKQRDNLLRELGEIGRGLRSADLEQQYNSQISAIDNRVKYATIDLGVTKEKIN 759          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A0Q3PBT7_SETIT (SMC hinge domain-containing protein n=1 Tax=Setaria italica TaxID=4555 RepID=A0A0Q3PBT7_SETIT)

HSP 1 Score: 132 bits (331), Expect = 1.000e-32
Identity = 73/176 (41.48%), Postives = 115/176 (65.34%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKISAVQSE 176
            +KEQRL   TFIPL+++  KP+ E+LR +  S +LV DV++F+ AL  A +YA GNT+VC+ L EAK+L++     ER KVVTV G+++ KSG MTGG+S  MEAR+ +W+   +E LKK+++ L +EM+E+      + +E  +  +  G++ +L++  V+      K+  V SE
Sbjct:    2 LKEQRLPPQTFIPLQSVRVKPIIEKLRTLGGSAQLVFDVIQFDRALEKAVLYAVGNTLVCDKLDEAKTLSWSG---ERYKVVTVDGILLTKSGTMTGGISGGMEARSNKWDDSRIESLKKKKNQLESEMSELGSPRELQRKELAISEKITGLEKKLQYLNVEHSNLTAKLLKVASE 174          
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Match: A0A2R6WD35_MARPO (SMC hinge domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WD35_MARPO)

HSP 1 Score: 132 bits (333), Expect = 1.280e-32
Identity = 71/176 (40.34%), Postives = 118/176 (67.05%), Query Frame = 0
Query:    1 MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAFVYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLSSAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKAGVQTRLKFATVDLQITEEKISAVQSE 176
            +KEQRL   TFIPL+++  KPV E+LR +  + KLV DV+  + AL  A VYA GNT+VC+ L EAK+L++G    ER K+VT+ G+++ KSG MTGG+S  MEAR+++W+ + +E LKK++++  AEMAE+      +S+E  +  + +G + ++ ++ ++ +  + K+  +  E
Sbjct:  565 LKEQRLPPQTFIPLQSVRVKPVQEKLRTLGGTAKLVFDVITIDPALEKALVYAVGNTLVCDGLDEAKALSWGH---ERHKMVTLDGILLAKSGTMTGGVSGGMEARSQKWDARAVESLKKKKETYEAEMAELGSIREMQSKEADIAGRISGCERKMHYSDIEKKGLDRKLKMLAEE 737          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118722.3853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2UGI3_CAPO32.950e-3843.82SMC hinge domain-containing protein n=2 Tax=Capsas... [more]
L8H1I6_ACACA1.060e-3543.58Structural maintenance of chromosomes protein n=1 ... [more]
UPI00077A18961.090e-3443.45structural maintenance of chromosomes protein 1A-l... [more]
UPI001CF5CE291.260e-3443.45structural maintenance of chromosomes protein 1A-l... [more]
A0A6U9R7I1_9CHLO2.780e-3341.24Structural maintenance of chromosomes protein n=1 ... [more]
A0A453RVU6_AEGTS6.060e-3343.21SMC hinge domain-containing protein n=1 Tax=Aegilo... [more]
A0A1Y1YY57_9FUNG7.030e-3339.88Structural maintenance of chromosomes protein n=1 ... [more]
A0A2P6NQN7_9EUKA9.620e-3341.52Structural maintenance of chromosomes protein n=1 ... [more]
A0A0Q3PBT7_SETIT1.000e-3241.48SMC hinge domain-containing protein n=1 Tax=Setari... [more]
A0A2R6WD35_MARPO1.280e-3240.34SMC hinge domain-containing protein n=2 Tax=Marcha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..178
NoneNo IPR availableCOILSCoilCoilcoord: 108..135
NoneNo IPR availableGENE3D3.30.70.1620coord: 18..100
e-value: 3.5E-11
score: 44.9
NoneNo IPR availablePANTHERPTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERcoord: 1..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 2..70
e-value: 2.0E-12
score: 47.4
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 1..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118722contigM-pyrifera_M_contig118722:12..545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118722.3853.1mRNA_M-pyrifera_M_contig118722.3853.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118722 3..545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118722.3853.1 ID=prot_M-pyrifera_M_contig118722.3853.1|Name=mRNA_M-pyrifera_M_contig118722.3853.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
MKEQRLGTATFIPLETISAKPVNEQLRQIDESVKLVLDVVRFENALRNAF
VYACGNTVVCEDLAEAKSLAFGRPGQERLKVVTVGGVMIHKSGMMTGGLS
SAMEARAKEWEQKDLEKLKKQRDSLVAEMAEVDRHLHTKSREQKLEAQKA
GVQTRLKFATVDLQITEEKISAVQSELK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010935SMC_hinge
IPR036277SMC_hinge_sf