prot_M-pyrifera_M_contig118718.3852.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118718.3852.1
Unique Nameprot_M-pyrifera_M_contig118718.3852.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
BLAST of mRNA_M-pyrifera_M_contig118718.3852.1 vs. uniprot
Match: L8GWB9_ACACA (Signal transducer and activator of transcription STAT family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWB9_ACACA)

HSP 1 Score: 103 bits (256), Expect = 2.600e-23
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    8 PIPQVIFKGKIIEDEYSVRLVVGTRMEVRSVSNVKAALVSEEKVWKIAEPLENDTCSLDAYNSVGTFSQIKVKVSSRMAPVYLKFGIQVLTSNASTPVTVQSNASFPFI 116
            P PQV+FKGK +ED Y + L+ G+ + ++++S VKA LV+EEK WK  +P+END  ++D+   V TF  IK+ VS+RM+ VYLKF +QV   N  T  T++S  S P I
Sbjct:  231 PTPQVLFKGKTLEDNYVLALLSGSNVNIQNISKVKAILVAEEKNWKNKKPIENDVQAMDSMKRVLTFHNIKLNVSTRMSMVYLKFAVQVTLQNGGTH-TIESAGSSPII 338          
BLAST of mRNA_M-pyrifera_M_contig118718.3852.1 vs. uniprot
Match: UPI000644B294 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B294)

HSP 1 Score: 60.1 bits (144), Expect = 3.880e-8
Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 0
Query:    2 LLVEGQPIPQVIFKG-KIIEDEYSVRLVVGTRMEVRSVSNVKAALVSEEKVWK----IAEPLENDTCSLDAYNSVGTFSQIKVKVSSRMAPVYLKFGIQVLTSNASTPVTVQSNASFPFI 116
            +++  QP  QVIF+G K I + + V LV G  M   SVS V A +   E   K      E LEN+  SLD  N   TFS +KV +S+RM+P YLKF   V    + T   ++S  + P +
Sbjct:  373 IILVQQPASQVIFRGGKGISEPFKVELVTGVVMP-ESVSVVVAKIDKNETTKKEKAAAKETLENNESSLDNSNRA-TFSNLKVNISTRMSPSYLKFVATVKDRGSKTGKIIESVQTNPLV 490          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118718.3852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
L8GWB9_ACACA2.600e-2347.71Signal transducer and activator of transcription S... [more]
UPI000644B2943.880e-838.33hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041410STATa immunoglobulin-like domainPFAMPF18214STATa_Igcoord: 2..116
e-value: 3.5E-25
score: 88.4
IPR037059Rel homology domain (RHD), DNA-binding domain superfamilyGENE3D2.60.40.340coord: 1..116
e-value: 8.7E-25
score: 89.0
IPR001217Transcription factor STATPANTHERPTHR11801SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTIONcoord: 2..116
NoneNo IPR availablePANTHERPTHR11801:SF65SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION A-RELATEDcoord: 2..116
IPR008967p53-like transcription factor, DNA-bindingSUPERFAMILY49417p53-like transcription factorscoord: 2..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118718contigM-pyrifera_M_contig118718:4..351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118718.3852.1mRNA_M-pyrifera_M_contig118718.3852.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118718 4..351 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118718.3852.1 ID=prot_M-pyrifera_M_contig118718.3852.1|Name=mRNA_M-pyrifera_M_contig118718.3852.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
MLLVEGQPIPQVIFKGKIIEDEYSVRLVVGTRMEVRSVSNVKAALVSEEK
VWKIAEPLENDTCSLDAYNSVGTFSQIKVKVSSRMAPVYLKFGIQVLTSN
ASTPVTVQSNASFPFI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041410STATa_Ig
IPR037059RHD_DNA_bind_dom_sf
IPR001217STAT
IPR008967p53-like_TF_DNA-bd