mRNA_M-pyrifera_M_contig118688.3846.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A7S4HHM5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHM5_9EUKA) HSP 1 Score: 89.4 bits (220), Expect = 1.430e-17 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLRE--QVEKYEMSVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATLLLCAGD-SKPRRVHVSLLNDLLV 492
Y YV+ YE + ++ N VLR+ +V+ + + T ES LI PVQRIPRY+LLL ++L++T+E HPDY LA A K++ A +VN R E L KV ++ Q+T + + RR+I+E L+ G SK R V+ L ND+LV
Sbjct: 141 YIDYVKNYENALRTLTELKKDNAVLRKLLKVQMRKCEGHEYETLESFLITPVQRIPRYNLLLGEILKHTNESHPDYPDLAAAYEKVQETARYVNDRAREAEQLAKVYTIQN----QITGKFE-RDLISPDRRLIQEGGLVQIYGPKSKLREVYCILFNDMLV 297
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: L8H6Q9_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6Q9_ACACA) HSP 1 Score: 89.0 bits (219), Expect = 1.950e-17 Identity = 59/166 (35.54%), Postives = 85/166 (51.20%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLREQVEKYEMSVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATLLLC---AGDSKPRRVHVSLLNDLLVVGTQ 504
Y QY YE V + +L + +++ +TF+S+LI+P+QRIPRY+LLL+DM+ +T E HPDY L +A++ ++ V DFVN L KV+ ++ G G Q V HR I E LL A + V V L NDLLV ++
Sbjct: 128 YTQYTNNYESAVVMLEQSANDKDILYQFIQRCYGGRADVLTFDSYLIMPIQRIPRYNLLLEDMIAHTWEHHPDYESLCKALKMLQSVTDFVNKDIATSSALTKVLHIQNSLG-------GEVQLVAPHRYWITEGKLLSMRFGALNLFSSFVLVYLFNDLLVFSSR 286
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A7S4IAZ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IAZ6_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 2.050e-17 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 133 ITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPRRVHVSLLNDLLVV 495
+T S LI P+QRI +Y LLLKD+LRNT +HPD+ L EA+ KIE V +VN R+ + ENL K+++++ Q E + Q V RR ++E +++ SKP+ V L NDL+V+
Sbjct: 139 LTLFSFLIKPIQRICKYPLLLKDLLRNTDAQHPDHDYLIEALSKIEEVVAYVNERKRLAENLQKILDVQ-----QQIESSEYLQLVSPSRRFVREGKMIILE-KSKPKERTVYLFNDLIVM 253
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A6B2L8T4_9EUKA (DH domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8T4_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 5.010e-17 Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLREQVEKYEMSVGSFITF--ESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPRRV-HVSLLNDLLVVGTQARQA 516
Y +YV YE V +FL KNK + V VG T+ S LI PVQRIPRY +LL D+++NT E HPD H L +A+ I+ A FVNA++ +E+ K++E++ K G +L S RVI L+LC K R + H +L+D++++ + ++
Sbjct: 97 YVEYVNNYENSV-RFLATSIKNKAFSQFVTD---KVGLVDTYPLSSLLIQPVQRIPRYEMLLSDLVKNTWETHPDVHALQKALEAIKEAAQFVNAQKKKFEDSEKLLEVQNKIGVELF----------SPNRVILADNLVLC---KKERDLFHCCVLSDVILLWEEVEKS 249
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A7S4MIG5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MIG5_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 2.240e-16 Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLREQVEKY-EMSVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPR-RVHVSLLNDLLVVGTQ 504
Y +Y+ Y+ V + R+ N + V K E+ + ES LI+PVQR+PR +LLKD+L++T + HPD+ L A I + FVN ++ EN NK+ +++K GK + V+ HR+ +KE +L + D K R V L +D+L+ T+
Sbjct: 348 YVEYINNYDSAVKLLVKLRESNSKFNKFVTKANELPELNMKQIESFLIMPVQRLPRIEMLLKDLLKHTDDNHPDHDTLERAFEGISELTAFVNEKKREAENFNKMAAVQRKMGK----KGSGHNIVQPHRKWLKEGSLDVWNVDKKKRIERSVILFSDMLLCSTE 508
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A6A5BCE0_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BCE0_NAEFO) HSP 1 Score: 85.5 bits (210), Expect = 3.230e-16 Identity = 61/165 (36.97%), Postives = 93/165 (56.36%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQ--KNKVLREQVEKYE--MSVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYG-KQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPRRVHVSLL-NDLLV 492
Y QY YE +N A + KNK E ++K + + TF+ LI PVQRIPRY+LLL ++L+NT H DY L A K++ VAD +N + T EN NK+I+L++ + Q + +GI+ V HR+ + E L + + +S ++ H L +D+LV
Sbjct: 94 YTQYFSNYEAALNSIREADKNPKNKKFSEWLKKTDERSKEANQQTFKQLLIQPVQRIPRYNLLLSEVLKNTPRTHVDYDNLKLASEKMKEVADHLNRQITEIENRNKLIKLKEIFVLNQSGKGSGITNIVEPHRKYVFEGELSILSDNSLNKQKHYFFLFSDMLV 258
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: UPI001CFE02BC (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFE02BC) HSP 1 Score: 85.1 bits (209), Expect = 4.410e-16 Identity = 61/173 (35.26%), Postives = 96/173 (55.49%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQ--KNKVLREQVEKYE--MSVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYG-KQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPRRVHVSLL-NDLLVVGTQARQA 516
Y QY YE +N A + KNK E ++K + + TF+ LI PVQRIPRY+LLL ++L+NT H DY L A K++ VAD +N + T EN NK+I+L++ + Q + +GI+ V HR+ + E L + + ++ ++ H L +D+LV + +A
Sbjct: 94 YTQYFSNYEAALNSIREADKNPKNKKFSEWLKKTDERSKEANQQTFKQLLIQPVQRIPRYNLLLSEVLKNTPRTHVDYDNLKLASEKMKEVADHLNRQITEIENRNKLIKLKEIFVLNQSGKGSGITNIVEPHRKYVFEGELSILSDNALNKQKHYFFLFSDMLVCCNEVPEA 266
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A8J4PR30_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PR30_9MYCE) HSP 1 Score: 85.1 bits (209), Expect = 4.550e-16 Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLR--EQVEKYEMSVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPRRVHVSLLNDLLVV 495
Y+QY R Y +N ++++K E+V+ +G E +LI PVQRIPRYSLLLKDM+ +T + HPDY L EA +K+ VA+++N ++ EN+ K+ E+++K + + +S R+ +KE + K + + L ND L +
Sbjct: 708 YSQYSRNYSEAMNALNECKKQSKFKSYLEKVKHDRPEIG-LRGLEDYLIRPVQRIPRYSLLLKDMISHTWKSHPDYAQLEEAFQKMNSVAEYMNEKKKEAENMMKLAEIQEKL-----DGESSAVLAKSFRKFVKEGDFVEVLTKGKKAPIVIYLFNDSLAI 863
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: D2VHP8_NAEGR (RhoGEF domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VHP8_NAEGR) HSP 1 Score: 85.1 bits (209), Expect = 4.610e-16 Identity = 53/167 (31.74%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLREQVEKYEM-SVGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKYGKQLTEQTGISQFVRSHRRVIKEATL--LLCAGDSKPRRVHVSLLNDLLVVGTQA 507
Y++Y ++ N+ L +K + +EQV K + S S + +S+LI+P+QRIPRY LLL+D+++++ HPDY L A+ KI VAD +N E N++I+++ ++ G V HR+ +K+ L ++ A +K R ++V L ND++++ ++
Sbjct: 511 YSRYCNNFDK-ANEVLRECKKREEFKEQVSKMDKDSRTSKLGLQSYLILPIQRIPRYRLLLQDLIKHSGPSHPDYKGLKLALEKICEVADHLNNTMKSIEATNEIIKIQSQF-------YGELNLVEPHRKFLKDGALQEIVSADFTKTRDIYVHLFNDIILLSQKS 669
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Match: A0A8J4PYE4_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PYE4_9MYCE) HSP 1 Score: 84.7 bits (208), Expect = 6.150e-16 Identity = 54/163 (33.13%), Postives = 86/163 (52.76%), Query Frame = 1
Query: 16 YAQYVRGYEPFVNKFLIARQKNKVLREQVEKYEMS---VGSFITFESHLIVPVQRIPRYSLLLKDMLRNTHEEHPDYHLLAEAVRKIERVADFVNARQTVYENLNKVIELEKKY-GKQLTEQTGISQFVRSHRRVIKEATLLLCAGDSKPRRVHVSLLNDLLV 492
Y QYV+ Y R+ N + + E S VGS+ LI+P+QRIPRY+LLL+D+++NT +H DY L E+++K++ VA +VN ++ EN+ KV E++ + GK HRR + E L + + K + + L ND+L+
Sbjct: 417 YTQYVKEYSTLFEAINNLRKNNSKFESFISEKEYSDKPVGSY------LILPIQRIPRYTLLLQDLVKNTWSDHLDYKNLTESLKKMQEVATYVNEKKREAENIAKVTEIQNNFIGK-------FDNLAEPHRRFVFEGNLSVINPNGKESQRVIFLFNDVLI 566 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118688.3846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118688.3846.1 >prot_M-pyrifera_M_contig118688.3846.1 ID=prot_M-pyrifera_M_contig118688.3846.1|Name=mRNA_M-pyrifera_M_contig118688.3846.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp ASANEYAQYVRGYEPFVNKFLIARQKNKVLREQVEKYEMSVGSFITFESHback to top mRNA from alignment at M-pyrifera_M_contig118688:18..533+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118688.3846.1 ID=mRNA_M-pyrifera_M_contig118688.3846.1|Name=mRNA_M-pyrifera_M_contig118688.3846.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig118688:18..533+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118688:18..533+ >mRNA_M-pyrifera_M_contig118688.3846.1 ID=mRNA_M-pyrifera_M_contig118688.3846.1|Name=mRNA_M-pyrifera_M_contig118688.3846.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig118688:18..533+ (Macrocystis pyrifera P11B4 male)back to top |