mRNA_M-pyrifera_M_contig11867.3843.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11867.3843.1
Unique NamemRNA_M-pyrifera_M_contig11867.3843.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 3.560e-136
Identity = 199/246 (80.89%), Postives = 227/246 (92.28%), Query Frame = 1 
Query:  130 KYDFSESNWMARAEEEKRLAQELARKFPDIGQVRVDRMGNIIGGVNPFEDTDVKLEDQPHPEDQE-DFPEMAGEISGMDDPADAPWRIEAERIVREQVEVCGLTCDDILWTFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELRGKLLERTYDELMITQSGRKVRIPLALVDEVRLPPALVEAGD 864
            KYDFS+ +  AR ++EKRLA+ELARKFPDIG+V+VD+ GNI+GGVNPFE TDVKLEDQP P+D E DFPE+AG I+GMDDPADAPWR+EAE+IVR+QV+ CGLTC DILWTFH+LEVTVTR E DGPI EAAYVDSD+LMQAIKG+N+ALE REEELFVLGRHEL+VATPGAKD+LTTDK+FKA+KGFEVIVK GGPFK KREL+GKLLERT+DELMI ++GRKVRIPLALVDEVRLPPALVEAGD
Sbjct:  115 KYDFSD-DLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 359
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 276 bits (705), Expect = 7.120e-87
Identity = 143/233 (61.37%), Postives = 179/233 (76.82%), Query Frame = 1 
Query:  172 EEKRLAQELARKFPDIGQVRVDRMGNIIGGVNPFEDTDVKLE-DQPHPEDQED-FPEMAGEISGMDDPADAPWRIEAERIVREQVEVCGLTCDDILWTFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELRGKLLERTYDELMITQSGRKVRIPLALVDEVRLPPALVEAGD 864
            EE+ +A E+ +++PD   V VD MGN+IGGV+P+ D +  LE  +P+   Q D +PE+AG+  GMDDP DAPWR EAE I+R +VE  GL C DI+W+FHKLEVTVTRG+      EA YVDSD LM+AI+ +N ALE+ EE L+VLGRHELI+ATPGAKDILTTD+EFKAFKGF+V+V TG     +RE+ GKL ERT+DEL++ Q GRKVRIPLALVDEVRLP A +E G+
Sbjct:  137 EEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGE 369
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.750e-34
Identity = 77/193 (39.90%), Postives = 109/193 (56.48%), Query Frame = 1 
Query:  316 DQEDFPEMAGEISGMDDPADAPWRIEAERIVREQVEVCGLTCDDILWTFHKLEVTVTR-------GENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELR---GKLLERTYDELMITQSGRKVRIPLALVDEVRLPPALVEAGD 864
            D ++ PE  GE  GMDDP DAPWR++AE ++R  V   G    D+ W  H + V +TR        E +G +A+A  + SD++++  + +  AL   +  L VL R  L V TPGAKD+LTT++EF+AF+G+EV V    P           G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  113 DWDNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.400e-33
Identity = 77/192 (40.10%), Postives = 109/192 (56.77%), Query Frame = 1 
Query:  316 DQEDFPEMAGEISGMDDPADAPWRIEAERIVREQVEVCGLTCDDILWTFHKLEVTVTRG-----ENDGP-IAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELR---GKLLERTYDELMITQSGRKVRIPLALVDEVRLPPALVEAGD 864
            D ++ PE  GE  GMDDP DAPWR+ AE ++R  V   G    D+ W  H + V +TR      EN+G  +A+A  + SD++++  + +  AL   +  L +L R  L V TPGAKD+LTT++EF+AF+G+EV V    P           G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  223 DWDNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 120 bits (302), Expect = 9.370e-29
Identity = 79/211 (37.44%), Postives = 111/211 (52.61%), Query Frame = 1 
Query:  262 VNPFEDTDVKLEDQ-PHPEDQEDFPEMAGEISGMDDPADAPWRIEAERIVREQVEVCGLTCDDILWTFHKLEVTVT--------------------------RGENDGPIAEAAYVDSDQLMQAIKGINSALEEREE-ELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELRGKLLERTYDELMITQSGRKVRIP 810
            ++P +  ++K ++Q P+P      P   G+  G DDP DAPWRIE E+I+R+  E  G   +D+ W      VT++                          R E D  + E A VD   +      I  AL+E E+ +L VL RHE+IV +PG  ++L T ++F AFKGF+VIV+T  P  + R L GKLLERT  +  ITQ G+KV IP
Sbjct:   18 IDPEDVEELKYKEQAPNPA----VPWRRGDPDGCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDA-VDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.400e-27
Identity = 75/171 (43.86%), Postives = 107/171 (62.57%), Query Frame = 1 
Query:  343 GEISGMDDPADAPWRIEAERIVREQVE-VCGLTCDDILWTFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFK-NKRE-LRGKLLERTYDELMITQSGRKVRIPLALVDEVRLPPA 846
            G ++G+DDP D  WR++AE +VR  V  + G+   D+ W    L+V + +  ++G   +   V++     A + I  ALE  +EEL +L RHEL V++ GAK+IL +++EF+AFKGF+V+VKT  P   +KRE L GKL+ R   E  I   GR VRIP  LV+EVRLP A
Sbjct:  124 GIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 289
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 103 bits (256), Expect = 3.690e-23
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 
Query:  517 AAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELRGKLLERTYDELMITQSGRKVRIPLALVDEVRLPPALVEAG 861
            A  VD+ ++    K I   L+ +E  L +L RHELI+ATPGA D L T ++F A++GF+VIV+T  PF + R L GKL+ER   +L+I + GR V IPL  V  VRLPPA  E G
Sbjct:   15 AMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.110e-23
Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 1 
Query:  343 GEISGMDDPADAPWRIEA----ERIVREQVEVCGLTCDDILWTFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEEL---FVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNK-------RELRGKLLERTYDELMITQSGRKVRIPLALVDEVRLPPALVEAGD 864
            G   GMDDP DAPWR+EA    E +V+E+         D+LW F  +++TVT  E+      +A ++        + I+  L   E EL     L  H L V TPGA +++TT ++F+A+KGF+V V T G  K+        + L G L  RT +E+ + Q GR V++P+A+V EVRLP   +E GD
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYPDAQAV--DVLWAFSNVQITVTPKEDANVPLSSAVIE-----MLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGD 276
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BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A7S2D135_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D135_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.130e-22
Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 1 
Query:  343 GEISGMDDPADAPWRIEAERIVREQVE-VCGLTCDDILWTFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRE-LRGKLLERTYDELMITQSGRKVRIPLALVDEVRL 837
            G+++G+DDP D  WRI  + ++RE +  + G++  DI W    L V +   EN     E + V  + ++   K I   LE  ++EL +L RH L V++ G  D+LT +++F  FKGFEV V T   F ++R  + G+L+ R   E  I Q GR V+IP   V+EVRL
Sbjct:  114 GDMNGLDDPRDVEWRIRGQDLIREAIAPLNGISVYDITWNIGDLTVFI---EN-----EESGVSMEDIIDCTKAIQDTLEPFDDELEILSRHTLEVSSKGIDDVLTAERQFITFKGFEVAVSTISTFSDRRAPILGRLVGRDVHETTINQKGRMVKIPNFYVEEVRL 272
[Close]
BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.060e-20
Identity = 65/153 (42.48%), Postives = 93/153 (60.78%), Query Frame = 1 
Query:  397 ERIVREQVE-VCGLTCDDILWTFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVLGRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFK-NKRE-LRGKLLERTYDELMITQSGRKVRIPLALVDEVRLPPA 846
            + +VR  V  + G+   D+ W    L+V + +  ++G   +   V++     A + I  ALE  +EEL +L RHEL V++ GAK+IL +++EF+AFKGF+V+VKT  P   +KRE L GKL+ R   E  I   GR VRIP  LV+EVRLP A
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 159
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11867.3843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI3.560e-13680.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA7.120e-8761.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA5.750e-3439.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA3.400e-3340.10Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2PI76_9STRA9.370e-2937.44Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2SW06_9STRA1.400e-2743.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1DE94_CYCTE3.690e-2348.70Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TZY1_9STRA4.110e-2337.77Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2D135_9STRA1.130e-2237.72Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2SV25_9STRA1.060e-2042.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11867contigM-pyrifera_M_contig11867:312..7260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score398.3
Seed ortholog evalue2.6e-108
Seed eggNOG ortholog2880.D7FLF3
Hectar predicted targeting categoryother localisation
EggNOG OGs2E9GY@1,2SFUT@2759
Ec32 ortholog descriptionRibosome maturation factor RimP, C-terminal
Ec32 orthologEc-12_007950.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1086
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11867.3843.1prot_M-pyrifera_M_contig11867.3843.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11867 468..7050 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815705.5446825-UTR-M-pyrifera_M_contig11867:311..4671622815705.5446825-UTR-M-pyrifera_M_contig11867:311..467Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11867 312..467 +
1692277530.8177102-UTR-M-pyrifera_M_contig11867:311..4671692277530.8177102-UTR-M-pyrifera_M_contig11867:311..467Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11867 312..467 +
1622815705.6345692-UTR-M-pyrifera_M_contig11867:7050..72601622815705.6345692-UTR-M-pyrifera_M_contig11867:7050..7260Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11867 7051..7260 +
1692277530.8940167-UTR-M-pyrifera_M_contig11867:7050..72601692277530.8940167-UTR-M-pyrifera_M_contig11867:7050..7260Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11867 7051..7260 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815705.557457-CDS-M-pyrifera_M_contig11867:467..5061622815705.557457-CDS-M-pyrifera_M_contig11867:467..506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 468..506 +
1692277530.8296638-CDS-M-pyrifera_M_contig11867:467..5061692277530.8296638-CDS-M-pyrifera_M_contig11867:467..506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 468..506 +
1622815705.5727153-CDS-M-pyrifera_M_contig11867:1972..21011622815705.5727153-CDS-M-pyrifera_M_contig11867:1972..2101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 1973..2101 +
1692277530.8395138-CDS-M-pyrifera_M_contig11867:1972..21011692277530.8395138-CDS-M-pyrifera_M_contig11867:1972..2101Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 1973..2101 +
1622815705.5832784-CDS-M-pyrifera_M_contig11867:4436..45051622815705.5832784-CDS-M-pyrifera_M_contig11867:4436..4505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 4437..4505 +
1692277530.8492272-CDS-M-pyrifera_M_contig11867:4436..45051692277530.8492272-CDS-M-pyrifera_M_contig11867:4436..4505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 4437..4505 +
1622815705.5977478-CDS-M-pyrifera_M_contig11867:5444..56081622815705.5977478-CDS-M-pyrifera_M_contig11867:5444..5608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 5445..5608 +
1692277530.8596568-CDS-M-pyrifera_M_contig11867:5444..56081692277530.8596568-CDS-M-pyrifera_M_contig11867:5444..5608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 5445..5608 +
1622815705.6102905-CDS-M-pyrifera_M_contig11867:6331..64811622815705.6102905-CDS-M-pyrifera_M_contig11867:6331..6481Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 6332..6481 +
1692277530.8712656-CDS-M-pyrifera_M_contig11867:6331..64811692277530.8712656-CDS-M-pyrifera_M_contig11867:6331..6481Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 6332..6481 +
1622815705.621293-CDS-M-pyrifera_M_contig11867:6881..70501622815705.621293-CDS-M-pyrifera_M_contig11867:6881..7050Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 6882..7050 +
1692277530.8811297-CDS-M-pyrifera_M_contig11867:6881..70501692277530.8811297-CDS-M-pyrifera_M_contig11867:6881..7050Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11867 6882..7050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11867.3843.1

>prot_M-pyrifera_M_contig11867.3843.1 ID=prot_M-pyrifera_M_contig11867.3843.1|Name=mRNA_M-pyrifera_M_contig11867.3843.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp
MARAEEEKRLAQELARKFPDIGQVRVDRMGNIIGGVNPFEDTDVKLEDQP
HPEDQEDFPEMAGEISGMDDPADAPWRIEAERIVREQVEVCGLTCDDILW
TFHKLEVTVTRGENDGPIAEAAYVDSDQLMQAIKGINSALEEREEELFVL
GRHELIVATPGAKDILTTDKEFKAFKGFEVIVKTGGPFKNKRELRGKLLE
RTYDELMITQSGRKVRIPLALVDEVRLPPALVEAGDLGY*
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mRNA from alignment at M-pyrifera_M_contig11867:312..7260+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11867.3843.1 ID=mRNA_M-pyrifera_M_contig11867.3843.1|Name=mRNA_M-pyrifera_M_contig11867.3843.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6949bp|location=Sequence derived from alignment at M-pyrifera_M_contig11867:312..7260+ (Macrocystis pyrifera P11B4 male)
GGTGTTGTGAAACCAGTGATCAAGGGCGCCGAGAAGGATGAGGATGAAGA
GGGCGAGGATGGGGACGAGGAGGACGAATCGGGTGGGGACGGTACTGAGC
AGAAGCCCAAGAGAAGGAAAAGGCGGAAAAAGTACGATTTCTCCGAATCG
AACTGGATGGCGAGGGCAGAGGAGGAGAAAAGGCTAGCGCAAGAGGTGAA
AGAGCTGCATCACTACAGTAGTGCAGAGTTGCACACACATGTGGTTGCCC
TGTAAACAGCACGAACCTGGCTGGTACTAGTACCAGTGTTGTTGTTGTTG
TTGTTGTTGTTCTCACATTAACTCTCGAACGAAGGAGTCCGTTGGTCACA
CAAACAAAGGTGCTGGAACCCTACTATTAATACTAGGAAGATCCGAAAAA
CTCTAAAAAATCGAAATTCAGCTGCCTAAGAAGGCGCACACGCACGCAAG
ATGAAATCGATGTGCAAAGTGAACTCACATAGCCGCGGGTATACCCTCTC
AACTACGACAACATAGAGTTCCTCCCCCCGTTCCCACCACTAACCACCTT
GTGGCTGCTGACTACAGCGGTTTCTGTCTGGAGTGCTGCCTGCGCCGTAC
GAAACGCACGGTAGTCGTGAACACAGAGAGGAACACGCCTCATGTCTGGG
GCGGTGAAAAGGGGCCAATCGAACCTAGAAAAACCACCATACGAATATCA
ACGATCGCCATCTCTTCCCGGATTGTCTGACACAAAAGGTACGGCACAGC
TATGATACCACGTCCCTGATGATTGTGGGGGTCATTCCCCATGAAGGGTA
TATGTATACCTGGTACGTCGTAGATCAGCTTTGCTACTTGTAGTACCCTT
TTTCCTGGTATGAACATGCGAGCTACTGAGTACCTGGCACCTCGTAATAT
AAAGTCTCATTAGACATGGAGAGAAGCAGCTCTGGACACGTACCACGTAC
CAGGTATGATAGGAGTATTGATGTGTCTTACATTCCAGGTACACCTGGTA
CCTACCTGGTACACAGCAGTACAGCATTTTGCGAAAGGATGCCGTCCTCC
TAATGACGGCGTCCTCTCGTAACAATTCGAGTATTTTGACGCCGACTCGC
GACGGGAGTGCCGCCCACAGCAGTTTTGGTGATGTTCATGCTCCTGCTGA
AGTCGAAACGAGCACAAAGACGAGTGGTCTAAGGCCGTATGAGCTATTGC
TGCCCTACAGCACTGCTCGTAAAGTGACTTTCAACATCTACGCCGTACTG
GTATACCAGGTGTAAACCTGGTACGAAGTACCCTTGGGTACAATATTTCG
ACCACGATAAGCTCCTTCCCTTCTCAGTTGATGGTTGACCAGCGACCAAC
TAAGCAAGTTCAATCCCAACAATGTTCCAGAGTAAATCAAACTTCTATGC
ATGTACACAGTACTGCTGAAGTTGGACTCGTGCTCCGGAGCGGCAGCAGC
AACGGCTCGAATCCAACACAAGCTATAGTTCGAGCTACATGAGTAAACAC
GGGCATTTGGAAGAAGCACAGGCCTCGAGACACACGCAGTTTAGACGCTG
CGTTGACGTTGACGTAGACTATTCGCATGAGAGGTTGTAGTGGCTGTTAG
GAAAGGTAGTAATATTTATCTTGACAAGGCTAATCACTCATCCCTGTTTC
GCCGTGTTCAGCTTGCACGCAAGTTTCCGGACATTGGCCAAGTGAGGGTG
GACCGCATGGGGAATATAATTGGAGGCGTGAATCCTTTCGAGGACACGGA
TGTGAAGCTAGAGGATCAACCTCATCCTGAGGATCAAGAGGTGGGTGCCT
ATTCATCAACCAATCATACTTCGAACCTACACTATTGCAGTTGTAGGTTT
TACAAGGAACTGGCCCATCATAGAGCAGTTGGAGCGCATGTAGACATAGG
CCTTCGCCGCAGCATGTACACACATACATCTACTACAACTATGTTTTGGG
GGGACAGCAGTGTTACTGTAGTATTGGTATGGTACTGGTATGGATTCAGA
TTTGGATCACTTTTGCAGTCAATGTAGAATAAAAAACTGCACAACATTGG
ACCTACGGTTATTCATCAACTCTCTTTCGGAGTTGATTGTTGATCAATTT
GTATAAATCGGGTTGATTTAGTCATGATTAGTTGATACACAATCAATCAA
CTATGATGTGATTAACACTCACTTTTATTGACGATATTCAACCGTTTACT
TTATAGATTCTGGCGCCAGCTGCGAGAATAGGACCTTGTTTCGCTCACGC
ACGGAGTCCCCCCCCACACGCGCTCTCAAACGTACGGTACAGTGCGACGG
TAGTACGTGGAACAGTGTTTCACTGTTGCAGCAAGGCGTCAGAAGCACTT
GAGCCTCAACAGTGTCGTACTTACTGTAGTACGTACCCCGCCATTCACCC
ATATACAATACCATGGATGGCGTGCATACTAAATTGCCAACATCCTTAAC
CGCGTTGCAAACAGTAGTTACAAGACACCCTACCAGGATACGGCATTAGC
GCGTTCTACCATAGTTTGTGCTTCATGCTTTCATCGAGCAATGTTTTTTC
TCCCACCCTTTCCCAGACGACTGTATTTATGTCTTAGTATCAACAAGTCC
GCCTCCGGAGAAGATACGTTTGGATGCGACAGATGACACTTGAACCGCAA
GAAGCTTGCGGGGTATATAGCGTGGCAATATCGGGATAGAAACGAGAGGA
CTATTCCCACCACCCTAGAGGCCCGCCTGCGACTTCTGCATTCTCAGCAC
CTTCCTCGGATTTTTGCAGTGGGCCCATTCGTCCACGATTTCGTCCCTCT
TGGACAAAGAAAGCACGCGCTTCTTTGCCGGGCTGGCTGCTGTCTGAAAT
ACACTTTTGGTTGCCCCGCAGGCTCATGTTTTCACCGTTACATAACAAAA
CGCCTCTTCCAATTAAAAAAAATAGTCAACCATTCATCATCATGTTCAAG
AGTCAACTATTAATAATCATCAGTTGATATATAATCAACAATTAGTCACA
ACACGTGATTCTAATTAATCACCAAAAATATTGATAATCAACACGTGATC
ATGAGTAGATGGACACCCCTAATTGGACCCCGTAATAGTGAGATTTTGAG
TCACCCCCCAATGGATAGCTTGGTGTGTACGGTATATTTTTGTTGAGCGA
TTTACGACGCGACGCCTCCGTAAAGAGCCCAAATTGGAAAAATGTCTCTG
TACAGGGCCCATTGCCAAGAAGTGTTCGGCTTTGAAGCTGCTCAACCCGT
TACTTTTCGTCTGCTGTGATGCTACGAGGCCTCCCGAATTTGATATTGAT
CGATAGTTTGCCGCCGTTGGCGAACGACTTTTAATGCAAAGGCCATCGGC
AAATTGTTGTTGACGAAAGCGATCGGCAATTTCGGCTTTCAACTTACTGT
CCACCCTCCGCCGCCAGCCTGCCTATGAGGCACCGTAAAAGACGGCTAGG
AACCTACCTGGATGCGAGATATGCACGTGTGGGCTTCGATCTGATTTTTT
TAGTCACCTTCGCTGTGTGAAAGGGGTTTTGTCATATTTGCTCAAGTATA
TACGAAAAACATATCTGTGCTACTACTTAATACACAGGTAAATCGCCTCC
TGTATCGAGATCGGGTATCACCCGGCGAACACACACCTCCACTCGTCATA
CATTGACCCCGGACAAGTTTACGGCCAGGTACTCCAAATTTATTTTCCTC
TTGGATTTTACCATGGATGGCAGTTTCCTTGTGTCCTGCTTAAGAGCTCT
GCCAACAACGGGAATTCGCGTCGAAAAAAACAACGGGCGCGGTCTTGACC
CTGTGTTACCAATCATCAGGCCACGAGAGCTGCTTTTGGAAGATCCGATA
TTCTTGGGGATATTTATGAATAGGAAATATGCCCATAACAAAGCGAACGC
ACATGAAAGTATTATGCAAGTCTTGGCGGAGATTCAGACCTGTGACAAAA
TCTAACCGCCCTTAGCGCGGTCTATTCGTAGTAACAGCTCATACTCAAAC
AGCCATGATGAGCAGACAGTTGTTTCGATGAAGGTGCAGGGATCGTCTAC
TTTCTACATATTAGTGCTCCACGCAGCTTTATCAACGATGTTTATTTGCG
TGTTTTTTATCGTGATTTTTACCAGGACTTCCCAGAAATGGCTGGCGAAA
TATCAGGAATGGACGACCCGGCAGACGCACCTTGGAGGATAGAGGTGAAG
TGAAAGGAACATGCACAGTAGCCAAGCCTGATAATTCGTTAGATTTCGCC
TGGTCAACTAGTGTTTAGATACAGCAAATCAGTTTCCTCGCTCTACGACA
CAAGGGTAGACTTTCTCGACCCCGGATTCCTCAAGCATTCCAATTCGAGC
ATGTCAGCAAATAAATGCGTTTTTAACTCTCGGGCCAACCCAAAAAAATG
ACCTCCTGCCATCCCTCGTTTCTTGGTTGATGTACATATCGCGGGTTGTT
CCGGTAATGTAAGTGGGAGCCTCACATCCCTCCACACGGTTGGCTTGACC
TCGAGTTCCGGCCGCAACGCTATCCCAGCATTTTTCTTGGGGGTACTACC
GAACCGAAGGTCTATACGAGTAGACATGACGCAAGGAAGCACAATTAGAC
GTGAGTGGGCGAGTGCAAGAAGTGCTGCCTCCATCGCGCGATAAAACCGG
CGCTTGGCGAGGAGGGTCATGAGGTCGTCCCGTTCAGACCCCAGATCTGA
ATCAAAGCGAAGAACTGAGATTGATCAAACCCATTGCTTGAAGTAGACAC
CATAACCTAAGAAATCTTGGGACACAGATGACCAATACGGTTACACGCAC
CACGCACACTTTTTGATATGTGTACTACTTGTGTTGCTCAGTTGCTCAGT
GGTGTAGATCTGCGTATGCACGCTTTCGCGAAGGAAACAGGTGCATGATG
CATCCACAAAGAAACACGGTATTTCCGTTTTGGCCGATTGTAATGCTGCC
GTTGTACCGCCGATCGGTCTAGTGTGTCATGTGTTTCGCTTCGTGGTCTT
TCTGTTGACAAACGACGAAGCCGTGCGGATTTATGCGAGCGGCATGGTAA
ATCATCTCGTGTGGGCTTTCGAATAGTTTGTGGTGCTCTAACTGTGTGAA
CTCCCACGCGACCACGGGTGATGTTCGCTGCAGGCAGAGAGAATTGTTCG
AGAGCAGGTGGAGGTTTGTGGGCTCACTTGCGACGATATCTTGTGGACGT
TCCATAAATTAGAAGTTACCGTTACGAGAGGAGAAAACGACGGACCAATT
GCAGAGGCAGCATATGTGGATAGCGATCAGCTAATGCAGGCAATCAAGTG
AGTACACATCACGAGCTAGGAAGATGCGCTGTCGACCAGTGATTTTAACT
CGTCTTCCTCTTGTCTTGTCTTTGGACGCTCGCCTTTCCAACGTAGCAGC
TCATCAAATTTAGTACTCGTACACGATAACTTTCGTGGTTCGTGGGGCTG
TTAAATCGACGTTCGTGGTTGTTTAGCCTGAACCTCGTTTGTTTCTCGCG
CTGGCCAAGAACGAAGTCGGAATCTATTGATGGTTGCTAACCTCGCGTGC
ATCTCGACCCCGTACGTGGGTCTCTGGCGTATTTTTTCAAAAGCACTCTC
ACGATATATATACAACGGGGCAAGCATTGTCAAAGCAAAGCTCGGGTTAT
TTACAGGGGGAGACCAACTGTGTTCTACTGTTTCAACGGTCCCGCAGTTA
ACATGCGGTATGCTTACGCGTACCCCAATTTTGATGAGATTCGCCTTTTT
ATTTTGCACCGTGCCAGAGGTCCTGATGACATTTTGATAGAATGCTTACC
TAGAAAGGGCTCAACAATAGTGTCGTCGAGCGAAAAGATAGCATGTATCC
CCGGTAAGATGTACAATTCGTGCCTTCCTCCCAACCACATACTCAGCAAT
TATACGTGTTTTGTATTGGGTATTAATACGTCTGGACTCATACGCCTTGT
TAGCGTTATGTAACCTGCATTCCGGTTGAGCTTGACTGTCAGCTCCATAC
CGGTACGTCTCTCACCACAGGGGCATCAACTCTGCGCTCGAGGAAAGGGA
GGAAGAGTTGTTTGTATTGGGACGCCACGAGCTCATCGTGGCAACGCCTG
GAGCTAAGGATATCCTGACAACCGACAAGGAATTCAAGGCCTTCAAGGGG
TTCGAGGTCATCGTTAAAACGTGAGTGGTCAATTCTTCTGTCTGTCATTG
TCGAGTCTATTGTTGTGCGCCCGAGAGAACACATCACGATAGGTATGCGC
TGGTCAGTTCCCATATTTGTATGTGCCCACTTCAAATTTGCAGGGCTCTT
CGCGATTCGGGTCACTAATAACGGGTTGGGTCGGGTTTGGACCCGACCCG
GCCCGCGAAAAAATTGAGCTGTCGATACACCTGACGCGAGATAGTGAAAA
GCTCCCGACCAGACCAGACCCGACCTATGATATTTTGGACACCTCTTGAC
GCGACCCGACCCGCCAGGTTTTGAACACCGGGTCGGGTCAGGTCAGACCC
GTGACAAGCCCCCCACAAATGCATTCGCTTTGGATGATTGACCGAAGGCA
TTCTCTGTTTCGTTTATCAGGGGAGGACCATTCAAGAACAAGCGAGAGCT
GCGGGGAAAACTGCTCGAGCGGACTTATGACGAGCTAATGATCACCCAAT
CTGGACGAAAAGTACGCATTCCTTTGGCGCTGGTCGACGAGGTCCGGTTG
CCACCAGCACTAGTAGAGGCGGGGGATCTAGGATATTAAGTGCAAAAGAA
AGTTCACGGGGCAGGACGGCTCTTCTGGTGTAATTCGTACGCTGGCGTAC
CGGCCACTGGTCGGTGGTGTTGCGAGGTGAATGTATATTTTATCTCTGTT
CTCAAGGCTTTGGGATTTTCGTGGTGGATTTTGCGTGCGATTCACAACCC
AAGAGAGGGTAAAGGGCACTCGGAAGCCCTGCTCGTCATTTGATTGCGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11867:312..7260+

>mRNA_M-pyrifera_M_contig11867.3843.1 ID=mRNA_M-pyrifera_M_contig11867.3843.1|Name=mRNA_M-pyrifera_M_contig11867.3843.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1440bp|location=Sequence derived from alignment at M-pyrifera_M_contig11867:312..7260+ (Macrocystis pyrifera P11B4 male)
ATGGCGAGGGCAGAGGAGGAGAAAAGGCTAGCGCAAGAGATGGCGAGGGC
AGAGGAGGAGAAAAGGCTAGCGCAAGAGCTTGCACGCAAGTTTCCGGACA
TTGGCCAAGTGAGGGTGGACCGCATGGGGAATATAATTGGAGGCGTGAAT
CCTTTCGAGGACACGGATGTGAAGCTAGAGGATCAACCTCATCCTGAGGA
TCAAGAGCTTGCACGCAAGTTTCCGGACATTGGCCAAGTGAGGGTGGACC
GCATGGGGAATATAATTGGAGGCGTGAATCCTTTCGAGGACACGGATGTG
AAGCTAGAGGATCAACCTCATCCTGAGGATCAAGAGGACTTCCCAGAAAT
GGCTGGCGAAATATCAGGAATGGACGACCCGGCAGACGCACCTTGGAGGA
TAGAGGACTTCCCAGAAATGGCTGGCGAAATATCAGGAATGGACGACCCG
GCAGACGCACCTTGGAGGATAGAGGCAGAGAGAATTGTTCGAGAGCAGGT
GGAGGTTTGTGGGCTCACTTGCGACGATATCTTGTGGACGTTCCATAAAT
TAGAAGTTACCGTTACGAGAGGAGAAAACGACGGACCAATTGCAGAGGCA
GCATATGTGGATAGCGATCAGCTAATGCAGGCAATCAAGCAGAGAGAATT
GTTCGAGAGCAGGTGGAGGTTTGTGGGCTCACTTGCGACGATATCTTGTG
GACGTTCCATAAATTAGAAGTTACCGTTACGAGAGGAGAAAACGACGGAC
CAATTGCAGAGGCAGCATATGTGGATAGCGATCAGCTAATGCAGGCAATC
AAGGGCATCAACTCTGCGCTCGAGGAAAGGGAGGAAGAGTTGTTTGTATT
GGGACGCCACGAGCTCATCGTGGCAACGCCTGGAGCTAAGGATATCCTGA
CAACCGACAAGGAATTCAAGGCCTTCAAGGGGTTCGAGGTCATCGTTAAA
ACGGGCATCAACTCTGCGCTCGAGGAAAGGGAGGAAGAGTTGTTTGTATT
GGGACGCCACGAGCTCATCGTGGCAACGCCTGGAGCTAAGGATATCCTGA
CAACCGACAAGGAATTCAAGGCCTTCAAGGGGTTCGAGGTCATCGTTAAA
ACGGGAGGACCATTCAAGAACAAGCGAGAGCTGCGGGGAAAACTGCTCGA
GCGGACTTATGACGAGCTAATGATCACCCAATCTGGACGAAAAGTACGCA
TTCCTTTGGCGCTGGTCGACGAGGTCCGGTTGCCACCAGCACTAGTAGAG
GCGGGGGATCTAGGATATTAAGGGAGGACCATTCAAGAACAAGCGAGAGC
TGCGGGGAAAACTGCTCGAGCGGACTTATGACGAGCTAATGATCACCCAA
TCTGGACGAAAAGTACGCATTCCTTTGGCGCTGGTCGACGAGGTCCGGTT
GCCACCAGCACTAGTAGAGGCGGGGGATCTAGGATATTAA
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