mRNA_M-pyrifera_M_contig11850.3823.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A1X7TYF9_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TYF9_AMPQE) HSP 1 Score: 75.5 bits (184), Expect = 2.680e-13 Identity = 43/130 (33.08%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 4 RKLLLMYKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDIWLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+ ++ ++KAAR P+ I HA +L L F+ + + ELK+EL Y K+I D + + W ++ LP W ++++L+Q SSA +ER FS++ + FG +Q + L D E S+ML++N
Sbjct: 523 KSIMAIFKAARYFSPQMIC-SLKPHASDLNQLACISFINSQAIEELKSELPKYMARAKDI-DKEVCPLNWWKQNQDDLPVWSREAKKVFLLQPSSASVERVFSLLKSSFGDKQETALQDYIEASLMLQYN 650
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4RAU9_STYPI (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RAU9_STYPI) HSP 1 Score: 75.1 bits (183), Expect = 3.870e-13 Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPD-LSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAAR+ P + + A L+ L F F + + A L FPL D ++++ D W HK LP W LV+++ LIQ SSA ER FS++ N FG+QQ S L D E SVMLR+N
Sbjct: 1102 FKAARLCCPVQVQAL-NPTAASLEELRNFPFANHDATI---ANLAQEFPLYVAASDGVTVTCEDDKLTWWANHKDTLPHWSSLVKKLLLIQPSSASAERVFSLLTNAFGSQQESALQDYLEASVMLRYN 1226
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A432I446_9GAMM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A432I446_9GAMM) HSP 1 Score: 72.8 bits (177), Expect = 2.330e-12 Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 4 RKLLLMYKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDIWLAHKQQ-LPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
R ++ +K AR+ P + L +A L+ F FV + L AEL Y I DLS + W A + LP W LVR++ LIQ SSA ER FS+++ + +QQ + L D E SVM+R+N
Sbjct: 490 RNIVRAFKVARLCCPVQVQLLIP-NAAALQEFKNFHFVDDNTIANLAAELPAYLAAADGIVDLSEEQKLAWWAARHHTLPHWASLVRKLLLIQPSSAASERVFSLLSTL-SSQQDNALEDYIEASVMIRYN 618
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4RHQ8_STYPI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RHQ8_STYPI) HSP 1 Score: 71.2 bits (173), Expect = 8.240e-12 Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 145 AELVVYFPLVKNIPD-LSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
A L FPL D ++++ D W HK LP W LV+++ LIQ SSA ER FS++ N FG+QQ S L D E SVMLR+N
Sbjct: 664 ANLAQEFPLYLAASDGVTVTCEDDKLTWWANHKDTLPHWSSLVKKLLLIQPSSASAERVFSLLTNAFGSQQESALQDYLEASVMLRYN 751
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4S6X8_STYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S6X8_STYPI) HSP 1 Score: 68.6 bits (166), Expect = 3.130e-11 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAAR+ P + AV ++ L F F+T +++L EL Y + +I T + W H LP W V++I L+Q SSA ER FS++ N F QQ + L + E SVMLR+N
Sbjct: 138 FKAARLCCPVQVQALRPT-AVSVQDLKQFSFITDAEVVQLVEELPNY---LATADGAAIETEEDKVHWWATHAAALPNWSAAVKKILLVQPSSASAERVFSLLQNAFSKQQEAALEETVETSVMLRYN 261
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: UPI000C051ABC (uncharacterized protein LOC111330574 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C051ABC) HSP 1 Score: 68.6 bits (166), Expect = 5.500e-11 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAAR+ P + AV ++ L F F+T +++L EL Y + +I T + W H LP W V++I L+Q SSA ER FS++ N F QQ + L + E SVMLR+N
Sbjct: 224 FKAARLCCPVQVQALRPT-AVSVQDLKQFSFITDAEVVQLVEELPNY---LATADGAAIETEEDKVHWWATHAAALPNWSAAVKKILLVQPSSASAERVFSLLQNAFSKQQEAALEETVETSVMLRYN 347
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4RB71_STYPI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RB71_STYPI) HSP 1 Score: 68.6 bits (166), Expect = 7.060e-11 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAAR+ P + AV ++ L F F+T +++L EL Y + +I T + W H LP W V++I L+Q SSA ER FS++ N F QQ + L + E SVMLR+N
Sbjct: 503 FKAARLCCPVQVQALRPT-AVSVQDLKQFSFITDAEVVQLVEELPNY---LATADGAAIETEEDKVHWWATHAAALPNWSAAVKKILLVQPSSASAERVFSLLQNAFSKQQEAALEETVETSVMLRYN 626
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4S074_STYPI (Waprin-Phi3 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S074_STYPI) HSP 1 Score: 68.6 bits (166), Expect = 7.450e-11 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAAR+ P + AV ++ L F F+T +++L EL Y + +I T + W H LP W V++I L+Q SSA ER FS++ N F QQ + L + E SVMLR+N
Sbjct: 966 FKAARLCCPVQVQALRPT-AVSVQDLKQFSFITDAEVVQLVEELPNY---LATADGAAIETEEDKVHWWATHAAALPNWSAAVKKILLVQPSSASAERVFSLLQNAFSKQQEAALEETVETSVMLRYN 1089
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4R5H2_STYPI (Uncharacterized protein K02A2.6 n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R5H2_STYPI) HSP 1 Score: 68.6 bits (166), Expect = 7.590e-11 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPLVKNIPDLSISTRDI----WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAAR+ P + AV ++ L F F+T +++L EL Y + +I T + W H LP W V++I L+Q SSA ER FS++ N F QQ + L + E SVMLR+N
Sbjct: 1360 FKAARLCCPVQVQALRPT-AVSVQDLKQFSFITDAEVVQLVEELPNY---LATADGAAIETEEDKVHWWATHAAALPNWSAAVKKILLVQPSSASAERVFSLLQNAFSKQQEAALEETVETSVMLRYN 1483
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Match: A0A2B4SBT4_STYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SBT4_STYPI) HSP 1 Score: 63.5 bits (153), Expect = 7.820e-10 Identity = 40/127 (31.50%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 22 YKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLE-LKAELVVYFPLVKNIPDLSISTRDI--WLAHKQQLPKWFGLVRRIWLIQSSSAIMERAFSVMNNIFGAQQTSLLNDLFELSVMLRHN 393
+KAARV+ P + + ++ L F F+ + ++ L EL Y +++P + R + W H+++LP W V+++ L+Q SSA ER FS+++ F QQ + L+D + SVML++N
Sbjct: 56 FKAARVMCPMIVG-WLRPTRTRVEALGIFPFLDNDATIDGLVRELPQYITATQDVP-IECEGRKVEWWKVHEERLPNWSSAVKKVLLVQPSSAAAERVFSLLSASFHEQQENALSDYLQASVMLQYN 180 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11850.3823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11850.3823.1 >prot_M-pyrifera_M_contig11850.3823.1 ID=prot_M-pyrifera_M_contig11850.3823.1|Name=mRNA_M-pyrifera_M_contig11850.3823.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp MYKAARVIYPRTISLYADAHAVELKWLLGFKFVTPELLLELKAELVVYFPback to top mRNA from alignment at M-pyrifera_M_contig11850:6963..7358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11850.3823.1 ID=mRNA_M-pyrifera_M_contig11850.3823.1|Name=mRNA_M-pyrifera_M_contig11850.3823.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig11850:6963..7358+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11850:6963..7358+ >mRNA_M-pyrifera_M_contig11850.3823.1 ID=mRNA_M-pyrifera_M_contig11850.3823.1|Name=mRNA_M-pyrifera_M_contig11850.3823.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig11850:6963..7358+ (Macrocystis pyrifera P11B4 male)back to top |