mRNA_M-pyrifera_M_contig118482.3818.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig118482.3818.1
Unique NamemRNA_M-pyrifera_M_contig118482.3818.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A1Y1IST6_KLENI (Metallophos domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IST6_KLENI)

HSP 1 Score: 100 bits (249), Expect = 7.120e-22
Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNPRAWLRPVVHGFGTDLRE 426
            FY    +E +  +  +  + +NV FM+R S+ + GVR +GCTLWS +P+  +  V+  ++DY RI  +    +  R LTV+DT ALH+ D +++ E+I  A+   E V+VLTHH+P L +G   P    RP  + FGTDL E
Sbjct:  603 FYGGEYEEVKSKIAKLAKKHDNVHFMDRKSISLRGVRVIGCTLWSRVPDHARDVVRNTINDYVRIGKKVGADL--RPLTVEDTNALHERDFEFVLEAILEAEGRREPVLVLTHHAP-LRKGVSAPAYEGRPTNYAFGTDLTE 741          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A1Y1IKQ6_KLENI (Metallophos domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKQ6_KLENI)

HSP 1 Score: 94.4 bits (233), Expect = 1.010e-19
Identity = 51/142 (35.92%), Postives = 82/142 (57.75%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNPRAWLRPVVHGFGTDLRE 426
            +Y        E+L  +     NV F+NRT V ++G++ +GCTLWS +P   +R VQ  ++DYR I +++    Q R LTVDDT   H  D ++L++ I  ++   +  +VLTHH+P +  G  +P+    P  HGF TD+++
Sbjct:   68 YYNDDYSAVNETLAKLADVYPNVSFLNRTGVEIDGIKVIGCTLWSRVPPACQRVVQATLNDYRLIFTEDVFGNQ-RPLTVDDTNEFHAIDRRFLEDEIEKSRNDRQSTLVLTHHAPSMV-GTSSPQFEGLPTNHGFATDMKD 207          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: UPI001CFF10A6 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFF10A6)

HSP 1 Score: 89.4 bits (220), Expect = 1.700e-18
Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLV------EGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNPR------AWLRPVVHGFGTDLRE 426
            FY +      ES++ VC EK+N+ F++++ V +      E V F+GC LWS +PE  K  V   M+DY+ IK Q+    +  NLTV+DTV   +  VQ++++ I  AK   +R +++TH++P L +G  +P+       + + +   F TDLR 
Sbjct:   82 FYGNEYYSCMESMKQVCLEKKNIHFLDQSVVEIKDDETGEMVVFIGCILWSRVPEASKPFVGTSMNDYKVIKIQDNASTEPVNLTVNDTVKWFEEQVQFIEKQIQLAKQENKRAIIVTHNAP-LTKGVSDPKYENSTTEFTKHLNTAFATDLRH 234          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A7S4IVN0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IVN0_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 9.840e-18
Identity = 54/148 (36.49%), Postives = 81/148 (54.73%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEK-ENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGH----MSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNPRAWLR-PVVHGFGTDLRE 426
            +YKS   E EE++   C +  +NVV+M  T+++ EGVR  G +LWS+IP E   +   +    +SDY+ I  +E     +R L   DT   H   V W+KE I  A+ +G+ +VVL+HH+P +   C  P      P+ H F T+L E
Sbjct:  111 YYKSDNIETEEAISMACKQAGDNVVYMQNTTLIREGVRVCGSSLWSFIPGEVGSDTYNNIHMRLSDYKHISIREGSA--KRALEPKDTHRWHLEHVTWIKEQISEAQESGQPMVVLSHHAPSM--NCSEPDIPASDPMSHAFCTELEE 254          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A7S0AM22_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AM22_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.640e-15
Identity = 39/138 (28.26%), Postives = 80/138 (57.97%), Query Frame = 1
Query:   13 SLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNPRAWLRPVVHGFGTDLRE 426
            S++E  + +R +C++++N+ F+ + S++++GV  LG TLWS IP+      +  M+DY  +          R +T ++T  L++ ++ W++  +  A+   ++V+VLTHH+P++  G  +P+     +   F +DLR 
Sbjct:   94 SIKEQTDWMRQICSKRDNLHFIEKDSLVLDGVVILGTTLWSQIPDRMLATAEKSMNDYH-LTYNHRPGESPRKVTAEETADLYQLNIGWIRSELAKARRRNQKVIVLTHHTPLM-EGTSHPQFDGSDLSCCFSSDLRS 229          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: L8GN68_ACACA (Metallophos domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GN68_ACACA)

HSP 1 Score: 78.6 bits (192), Expect = 1.300e-14
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLVEG----VRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEA-----ERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNP-RAWLRP--VVHGFG 411
            +Y S        +   C+   N+ F++ +SVL+      VR LG TLW++ PE +   ++  ++DY  I   E      E  ++R L   DT   H  +V WLK +I  AKAAGE VVVLTHH P    G G    + L+P  ++ G+G
Sbjct:   64 YYSSDRDTVNREIAQFCSSIANLHFLHMSSVLLNDNGHKVRVLGTTLWNHCPEFYLGHLEATVNDYSLIMFSETPASSEEEPKKRKLRAADTNRWHAEEVAWLKAAIAEAKAAGEAVVVLTHHKPGNIMGVGAEWESLLKPPVILWGYG 212          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A6B2LCM3_9EUKA (Metallophos domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCM3_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 5.020e-14
Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPV 351
            F+  S  E    +  +CA   N+VFM+R SV+V+ V+F+G TLWS++ +      +   +DY +I   E+ +  +RN+   DT   +K D++++KE I  +K     VVVLTHH P+
Sbjct:   57 FFNHSWAECRNDIEQICASHPNLVFMDRRSVIVDHVKFVGATLWSHVSDSAGPGTEKRWNDYTQIGVFESGK--KRNIKYTDTNQWYKDDLKYIKEEISTSK---HPVVVLTHHCPL 168          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A6A5B6Q7_NAEFO (Metallophos domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5B6Q7_NAEFO)

HSP 1 Score: 75.9 bits (185), Expect = 9.820e-14
Identity = 51/161 (31.68%), Postives = 78/161 (48.45%), Query Frame = 1
Query:    1 FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLV-----EGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQ----ERNLTVDDTVALHKGDVQWLKESIGAAKAAGE----RVVVLTHHSPVLYRGCGNP------RAWLRPVVHGFGTDLRE 426
            FY +      E +  VC++  NV F++R SV +     E + FLGC LWS +P+  K  VQ  M+DY  IK ++  +       R LTVDDT      D  +LK++I   +        +++V+THH+P+   G  +P       +  R +   F TDL  
Sbjct:   62 FYNNEYWSCNEQMNKVCSQFNNVYFLDRGSVEITSNSGEKISFLGCALWSQVPDHAKSIVQNSMNDYHIIKIKDNNQSNFHNITRKLTVDDTNWFFNRDYNFLKDAIEQERNKNSTQQRKIIVVTHHAPMT-TGVSSPYYEQTQNSETRLINTAFATDLHH 221          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A8F8PJZ8_9VIRU (Metallophosphoesterase n=1 Tax=Clandestinovirus TaxID=2831644 RepID=A0A8F8PJZ8_9VIRU)

HSP 1 Score: 75.9 bits (185), Expect = 1.350e-13
Identity = 47/149 (31.54%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   13 SLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGHMSDYRRI-----KSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSP------VLYRGCGNPRAWLRPVVHGFGTDLRE 426
            ++ + +E L+ +     NV  +NR SV+++ V+F+G TLW+  P EH++ VQ  ++DY+ I        +  R   + +TVDDTV  H+ D+ ++K+ I  A       VV+THH P      + YR  G        + HG+ T L +
Sbjct:   91 TINDVDELLKDMETSLPNVHLLNRKSVIIDNVKFIGATLWTGCPPEHRQTVQSGLNDYQLIYKDKGTGDDVTRRDWKKVTVDDTVDRHRYDLAFIKDEINNATLP---TVVITHHCPTREHIALKYRNEG-------ALNHGYHTPLED 229          
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Match: A0A7S2ECS7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECS7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.350e-13
Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 1
Query:   13 SLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEEHKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGAAKAAGERVVVLTHHSPVLYRGCGNPR 378
            S+ E  E +R+VCAE++N+ F+ + ++ + GV   G TLWS IP+E     +  ++DYR   ++         L   +T   HK  V WL   +  +K   + V+VLTHH+P L  G  +PR
Sbjct:   85 SVSEQIEWMRNVCAERDNLHFLEQETINLNGVHICGATLWSDIPDEFNELAERSLNDYRCSYNKSDGEEGLHRLRATETTRWHKETVAWLTNELEESKKRNQPVLVLTHHTPKL-AGTSHPR 205          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118482.3818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1IST6_KLENI7.120e-2239.44Metallophos domain-containing protein n=1 Tax=Kleb... [more]
A0A1Y1IKQ6_KLENI1.010e-1935.92Metallophos domain-containing protein n=1 Tax=Kleb... [more]
UPI001CFF10A61.700e-1834.42uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A7S4IVN0_9EUKA9.840e-1836.49Hypothetical protein (Fragment) n=2 Tax=Vannella s... [more]
A0A7S0AM22_9STRA4.640e-1528.26Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
L8GN68_ACACA1.300e-1434.90Metallophos domain-containing protein n=1 Tax=Acan... [more]
A0A6B2LCM3_9EUKA5.020e-1435.90Metallophos domain-containing protein n=1 Tax=Arce... [more]
A0A6A5B6Q7_NAEFO9.820e-1431.68Metallophos domain-containing protein n=1 Tax=Naeg... [more]
A0A8F8PJZ8_9VIRU1.350e-1331.54Metallophosphoesterase n=1 Tax=Clandestinovirus Ta... [more]
A0A7S2ECS7_9STRA1.350e-1334.43Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118482contigM-pyrifera_M_contig118482:53..547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue3.8e-14
Seed eggNOG ortholog5762.XP_002682047.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Calcineurin-like phosphoesterase superfamily domain
EggNOG OGs2CJ6N@1,2S3SZ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size429
Cds size429
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815704.3910785-CDS-M-pyrifera_M_contig118482:52..2831622815704.3910785-CDS-M-pyrifera_M_contig118482:52..283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118482 53..283 -
1692277530.371722-CDS-M-pyrifera_M_contig118482:52..2831692277530.371722-CDS-M-pyrifera_M_contig118482:52..283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118482 53..283 -
1622815704.4012227-CDS-M-pyrifera_M_contig118482:349..5471622815704.4012227-CDS-M-pyrifera_M_contig118482:349..547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118482 350..547 -
1692277530.3809354-CDS-M-pyrifera_M_contig118482:349..5471692277530.3809354-CDS-M-pyrifera_M_contig118482:349..547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig118482 350..547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118482.3818.1prot_M-pyrifera_M_contig118482.3818.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig118482 53..547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig118482.3818.1

>prot_M-pyrifera_M_contig118482.3818.1 ID=prot_M-pyrifera_M_contig118482.3818.1|Name=mRNA_M-pyrifera_M_contig118482.3818.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
FYKSSLQEAEESLRSVCAEKENVVFMNRTSVLVEGVRFLGCTLWSYIPEE
HKREVQGHMSDYRRIKSQEAERVQERNLTVDDTVALHKGDVQWLKESIGA
AKAAGERVVVLTHHSPVLYRGCGNPRAWLRPVVHGFGTDLRE*
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mRNA from alignment at M-pyrifera_M_contig118482:53..547-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig118482.3818.1 ID=mRNA_M-pyrifera_M_contig118482.3818.1|Name=mRNA_M-pyrifera_M_contig118482.3818.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig118482:53..547- (Macrocystis pyrifera P11B4 male)
TTCTACAAGAGTAGCCTGCAGGAGGCAGAAGAGAGCTTGCGCTCTGTGTG TGCGGAGAAAGAGAACGTGGTGTTCATGAACCGCACATCGGTGCTGGTGG AGGGAGTACGCTTTCTTGGCTGCACACTGTGGTCCTACATCCCTGAGGAG CACAAGAGAGAAGTACAGGGCCACATGAGTGACTACCGCCGCATCAAGGT CAAAGAGGCACCAGCAGAGGAAGATCTTCCTGCCAGTGGAGATGAGAGCG ATTGTAAAGAAGAGAGCCAGGAAGCGGAGAGAGTGCAGGAGAGAAACCTC ACTGTGGACGACACTGTGGCTCTTCACAAAGGCGACGTACAGTGGCTCAA GGAGAGCATCGGTGCTGCCAAGGCGGCAGGCGAGCGTGTGGTGGTCCTCA CCCACCACTCTCCCGTCCTGTACAGGGGATGCGGCAACCCGCGCGCTTGG CTGCGCCCTGTCGTCCATGGCTTTGGCACTGATCTGCGCGAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig118482:53..547-

>mRNA_M-pyrifera_M_contig118482.3818.1 ID=mRNA_M-pyrifera_M_contig118482.3818.1|Name=mRNA_M-pyrifera_M_contig118482.3818.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig118482:53..547- (Macrocystis pyrifera P11B4 male)
TTCTACAAGAGTAGCCTGCAGGAGGCAGAAGAGAGCTTGCGCTCTGTGTG
TGCGGAGAAAGAGAACGTGGTGTTCATGAACCGCACATCGGTGCTGGTGG
AGGGAGTACGCTTTCTTGGCTGCACACTGTGGTCCTACATCCCTGAGGAG
CACAAGAGAGAAGTACAGGGCCACATGAGTGACTACCGCCGCATCAAGTT
CTACAAGAGTAGCCTGCAGGAGGCAGAAGAGAGCTTGCGCTCTGTGTGTG
CGGAGAAAGAGAACGTGGTGTTCATGAACCGCACATCGGTGCTGGTGGAG
GGAGTACGCTTTCTTGGCTGCACACTGTGGTCCTACATCCCTGAGGAGCA
CAAGAGAGAAGTACAGGGCCACATGAGTGACTACCGCCGCATCAAGAGCC
AGGAAGCGGAGAGAGTGCAGGAGAGAAACCTCACTGTGGACGACACTGTG
GCTCTTCACAAAGGCGACGTACAGTGGCTCAAGGAGAGCATCGGTGCTGC
CAAGGCGGCAGGCGAGCGTGTGGTGGTCCTCACCCACCACTCTCCCGTCC
TGTACAGGGGATGCGGCAACCCGCGCGCTTGGCTGCGCCCTGTCGTCCAT
GGCTTTGGCACTGATCTGCGCGAGTAGAGCCAGGAAGCGGAGAGAGTGCA
GGAGAGAAACCTCACTGTGGACGACACTGTGGCTCTTCACAAAGGCGACG
TACAGTGGCTCAAGGAGAGCATCGGTGCTGCCAAGGCGGCAGGCGAGCGT
GTGGTGGTCCTCACCCACCACTCTCCCGTCCTGTACAGGGGATGCGGCAA
CCCGCGCGCTTGGCTGCGCCCTGTCGTCCATGGCTTTGGCACTGATCTGC
GCGAGTAG
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