mRNA_M-pyrifera_M_contig11847.3816.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11847.3816.1
Unique NamemRNA_M-pyrifera_M_contig11847.3816.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: D7FL64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL64_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 8.160e-82
Identity = 119/134 (88.81%), Postives = 130/134 (97.01%), Query Frame = 3 
Query:   30 QAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVEGA 431
            QAIYPIKYQ  L+E+TIRGLELPADLYS+DDER+SSALGYTAHLVCMLAKYLQ+ LRYQ+IYNASRSAVRDNVTG GVAYPLFRRGVEKERFDRGVYLLGRDVEQ+LT+RGVPAKRGGGQLLRNLERLM+++GA
Sbjct:    3 QAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNVTGVGVAYPLFRRGVEKERFDRGVYLLGRDVEQILTARGVPAKRGGGQLLRNLERLMSIDGA 136
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A6H5JMT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT0_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 3.800e-81
Identity = 127/143 (88.81%), Postives = 138/143 (96.50%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVEGA 431
            RRARLT+ELQAIYPIKYQ  L+E+TIRGLELPADLYS+DDER+SSALGYTAHLVCMLAKYLQ+ LRYQ+IYNASRSAVRDNVTG GVAYPLFRRGVEKERFDRGVYLLGRDVEQMLT+RGVPAKRG GQLLRNLERLM+++GA
Sbjct:  433 RRARLTAELQAIYPIKYQGSLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNVTGVGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTARGVPAKRGSGQLLRNLERLMSIDGA 575
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A7S3HCI1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCI1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.860e-38
Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVE 425
            R+ +L SELQ IYPI+  +   E+ IRG+E+PADLY+ +DE+V++ALGYT HL+ + +KYL++PLRYQL++ ASRS +RD V G G   PLFRRG E+ERFDR V  L R VEQ+L SRGV  +     +L N+  L + E
Sbjct:  295 RKIKLLSELQTIYPIERLDN-GEFAIRGVEMPADLYAREDEQVAAALGYTVHLLLLASKYLEIPLRYQLLFMASRSFIRDPVVGNGTTLPLFRRGTERERFDRAVLWLKRAVEQLLQSRGVTYEPNQ-HILSNIHALFSCE 433
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A7S1XLF7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.340e-38
Identity = 78/145 (53.79%), Postives = 103/145 (71.03%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVT-GAGVA---YPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVE 425
            R+ RL +ELQ+IYP++     RE+ IRGLELP ++ S DDE VSSALGYTAHLV ML+KYL VPLRYQ+++ +SRSA+RD V  GA  +   Y LFRRGVE+ERF+  V +L ++ +Q+L +RGVP       +L NL+ L   E
Sbjct:   35 RQTRLLAELQSIYPLQLLPN-REWAIRGLELPREMLSKDDEHVSSALGYTAHLVLMLSKYLGVPLRYQILFYSSRSAIRDEVRDGANASNNTYYLFRRGVERERFESAVLMLQKNCDQLLAARGVPYAPEL-SMLANLQNLFVHE 177
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A7R9U751_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U751_9STRA)

HSP 1 Score: 139 bits (349), Expect = 9.980e-36
Identity = 77/144 (53.47%), Postives = 98/144 (68.06%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNV---TGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVE 425
            R+ RL +ELQ+IYP++     +E+ IRGLELP DL   DDE +SSALGY AHLV ML+KYL VPLRYQ++Y +SRSA+RD V     A   Y LFRRGVE+ERF+  V +L ++VEQ+L +R VP       +L NL  L   E
Sbjct:  381 RQTRLLAELQSIYPLQLMPN-KEWAIRGLELPKDLSGKDDEHISSALGYAAHLVLMLSKYLAVPLRYQILYYSSRSAIRDEVRDGANASTTYCLFRRGVERERFELAVMMLQKNVEQLLAARDVPFDSSL-SILPNLHNLFVHE 522
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A7S2SPW0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW0_9STRA)

HSP 1 Score: 134 bits (336), Expect = 5.630e-34
Identity = 75/143 (52.45%), Postives = 96/143 (67.13%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVA--YPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVE 425
            R+ +L SELQ+IYPI   E   E+ I+GL+LP D  S DD++VSSALGY  H+V MLAKY Q+PLRYQL Y ASRSAVRD V        +PL+R+GV+ +RF++G+  L  DV+Q+L  RGVP  R    LL+ L  L   E
Sbjct:  359 RQVKLVSELQSIYPITETEH-HEWAIKGLDLPEDCTSADDDQVSSALGYVVHVVVMLAKYFQIPLRYQLAYFASRSAVRDRVASNSREHIFPLYRKGVDPQRFEQGLAYLTADVDQVLAMRGVPFDRSF-HLLKKLHLLFVHE 499
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A835Z4V6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.210e-32
Identity = 79/142 (55.63%), Postives = 93/142 (65.49%), Query Frame = 3 
Query:   15 LTSELQAIYPIKYQEKLREYTIRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGV--PAKR-----GGGQLLRNLERLMA 419
            L   L+ +YPI+Y      Y IRGL L  DL S ++E V++AL Y  HL  +LAKYL V LRYQL   ASRSAVRD V G   AYPLFRRG E ERF+RGV LL RDVEQ+L +RG+  PA+      GGG LL  L+ LMA
Sbjct:  354 LAGSLKEVYPIRYDTAAGGYAIRGLVL--DLGSREEEVVAAALAYATHLTSLLAKYLNVTLRYQLFCGASRSAVRDAVLGTP-AYPLFRRGAETERFERGVALLSRDVEQLLAARGLAHPARAKDCGGGGGALLVALQYLMA 492
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: W7TAB1_9STRA (Uv radiation resistance-associated protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAB1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.570e-30
Identity = 77/164 (46.95%), Postives = 103/164 (62.80%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADLYSV--DDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPA-----KRG----GGQ------------LLRNLERLMAVE 425
            R+ RL + L+ IYPI+     +EY IRGLELPAD+     DDE V+SALGY  H++ ML+KYL+VPLRY L   ASRS +RD   G  V +PL+RRGVE+ERF+  +YLL +D++ +L +RGVP      ++G    GGQ            +L+NLE L   E
Sbjct:  388 RQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPV-FPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHE 550
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A7S3XTF5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTF5_HETAK)

HSP 1 Score: 113 bits (283), Expect = 3.790e-29
Identity = 55/124 (44.35%), Postives = 91/124 (73.39%), Query Frame = 3 
Query:    3 RRARLTSELQAIYPIKYQEKLREYTIRGLELPADL---YSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGV 365
            RRA+L  +L+ IYPI++  +   Y IRG+E+P+DL   +S +DE++ +ALG+  H++ ML+KYL  PL Y+++YN SRS + D++T   + +PL++RG E+ERF+RG+ LL RD++ +L  +G+
Sbjct:   29 RRAKLAEQLRHIYPIEHSGQ-GNYNIRGIEIPSDLSQLWSREDEQIGTALGFICHILLMLSKYLMSPLPYRILYNPSRSMIYDHLTH-NIEFPLYKRGAERERFERGLALLDRDLDALLCEQGL 150
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BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Match: A0A7S2BP53_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP53_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.030e-28
Identity = 62/123 (50.41%), Postives = 78/123 (63.41%), Query Frame = 3 
Query:   78 IRGLELPADLYSVDDERVSSALGYTAHLVCMLAKYLQVPLRYQLIYNASRSAVRDNV-------TGAGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVE 425
            IRGL+LP +  + DDE VSSALGY  HL+ ML+KYLQ+PLRYQL+Y+ASRSAVRD V       +     YPL+RRGV+  RF   +  L  +V Q+LT RGV        +L+NL  L   E
Sbjct:    2 IRGLDLPYNYEAKDDEVVSSALGYVTHLMLMLSKYLQIPLRYQLVYSASRSAVRDRVAPGRETPSPTSNIYPLYRRGVDNARFVTAIEFLQANVRQVLTVRGVHYDEKA-HMLKNLNELFKSE 123
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11847.3816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL64_ECTSI8.160e-8288.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMT0_9PHAE3.800e-8188.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3HCI1_9STRA2.860e-3853.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1XLF7_9STRA5.340e-3853.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U751_9STRA9.980e-3653.47Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SPW0_9STRA5.630e-3452.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z4V6_9STRA3.210e-3255.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TAB1_9STRA1.570e-3046.95Uv radiation resistance-associated protein n=4 Tax... [more]
A0A7S3XTF5_HETAK3.790e-2944.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2BP53_9STRA6.030e-2850.41Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11847contigM-pyrifera_M_contig11847:2053..5777 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score164.5
Seed ortholog evalue2.3e-38
Seed eggNOG ortholog2880.D7FL64
Preferred nameUVRAG
KEGG koko:K01384,ko:K21249
KEGG Pathwayko04140,ko04150,ko04310,ko04390,ko04550,ko04916,ko04934,ko05165,ko05166,ko05200,ko05205,ko05217,ko05224,ko05225,ko05226,map04140,map04150,map04310,map04390,map04550,map04916,map04934,map05165,map05166,map05200,map05205,map05217,map05224,map05225,map05226
KEGG ModuleM00677
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000149,GO:0000226,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000726,GO:0001932,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005813,GO:0005815,GO:0005856,GO:0005942,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006810,GO:0006890,GO:0006906,GO:0006914,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007034,GO:0007049,GO:0007051,GO:0007059,GO:0007098,GO:0007275,GO:0007399,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007548,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0008285,GO:0008593,GO:0009056,GO:0009057,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010506,GO:0010508,GO:0010564,GO:0010638,GO:0010646,GO:0010648,GO:0012505,GO:0015630,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016239,GO:0016241,GO:0016322,GO:0017124,GO:0019058,GO:0019220,GO:0019222,GO:0019898,GO:0019904,GO:0021700,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030100,GO:0030139,GO:0030154,GO:0030182,GO:0030260,GO:0030496,GO:0030539,GO:0031023,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031399,GO:0031410,GO:0031982,GO:0032268,GO:0032465,GO:0032501,GO:0032502,GO:0032535,GO:0032801,GO:0032879,GO:0032991,GO:0033043,GO:0033554,GO:0034622,GO:0034641,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035295,GO:0035493,GO:0042127,GO:0042325,GO:0042551,GO:0043112,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043243,GO:0043244,GO:0043549,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045324,GO:0045335,GO:0045746,GO:0045807,GO:0045859,GO:0046483,GO:0046661,GO:0046718,GO:0046907,GO:0048193,GO:0048259,GO:0048260,GO:0048284,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048608,GO:0048666,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051036,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051174,GO:0051179,GO:0051234,GO:0051235,GO:0051246,GO:0051302,GO:0051338,GO:0051640,GO:0051641,GO:0051645,GO:0051649,GO:0051651,GO:0051657,GO:0051684,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051806,GO:0051828,GO:0060255,GO:0060429,GO:0060562,GO:0060627,GO:0061024,GO:0061025,GO:0061458,GO:0061695,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0071695,GO:0071704,GO:0071840,GO:0071900,GO:0071985,GO:0080090,GO:0090066,GO:0090174,GO:0090304,GO:0090598,GO:0097680,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:1901096,GO:1901098,GO:1901360,GO:1901575,GO:1902494,GO:1990234
EggNOG free text desc.SNARE complex assembly
EggNOG OGsKOG2896@1,KOG2896@2759
COG Functional cat.OU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko04131
Exons3
Model size476
Cds size267
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11847.3816.1prot_M-pyrifera_M_contig11847.3816.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11847 4586..5735 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815704.1490047-UTR-M-pyrifera_M_contig11847:2052..20841622815704.1490047-UTR-M-pyrifera_M_contig11847:2052..2084Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11847 2053..2084 +
1692277530.2786417-UTR-M-pyrifera_M_contig11847:2052..20841692277530.2786417-UTR-M-pyrifera_M_contig11847:2052..2084Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11847 2053..2084 +
1622815704.167159-UTR-M-pyrifera_M_contig11847:4450..45851622815704.167159-UTR-M-pyrifera_M_contig11847:4450..4585Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11847 4451..4585 +
1692277530.289653-UTR-M-pyrifera_M_contig11847:4450..45851692277530.289653-UTR-M-pyrifera_M_contig11847:4450..4585Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11847 4451..4585 +
1622815704.2081096-UTR-M-pyrifera_M_contig11847:5735..57771622815704.2081096-UTR-M-pyrifera_M_contig11847:5735..5777Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11847 5736..5777 +
1692277530.316298-UTR-M-pyrifera_M_contig11847:5735..57771692277530.316298-UTR-M-pyrifera_M_contig11847:5735..5777Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11847 5736..5777 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815704.1833556-CDS-M-pyrifera_M_contig11847:4585..46441622815704.1833556-CDS-M-pyrifera_M_contig11847:4585..4644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11847 4586..4644 +
1692277530.2973583-CDS-M-pyrifera_M_contig11847:4585..46441692277530.2973583-CDS-M-pyrifera_M_contig11847:4585..4644Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11847 4586..4644 +
1622815704.194244-CDS-M-pyrifera_M_contig11847:5527..57351622815704.194244-CDS-M-pyrifera_M_contig11847:5527..5735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11847 5528..5735 +
1692277530.3083496-CDS-M-pyrifera_M_contig11847:5527..57351692277530.3083496-CDS-M-pyrifera_M_contig11847:5527..5735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11847 5528..5735 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11847.3816.1

>prot_M-pyrifera_M_contig11847.3816.1 ID=prot_M-pyrifera_M_contig11847.3816.1|Name=mRNA_M-pyrifera_M_contig11847.3816.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
MLAKYLQVPLRYQLIYNASRSAVRDNVTGAGVAYPLFRRGVEKERFDRGV
YLLGRDVEQMLTSRGVPAKRGGGQLLRNLERLMAVEGA*
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mRNA from alignment at M-pyrifera_M_contig11847:2053..5777+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11847.3816.1 ID=mRNA_M-pyrifera_M_contig11847.3816.1|Name=mRNA_M-pyrifera_M_contig11847.3816.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3725bp|location=Sequence derived from alignment at M-pyrifera_M_contig11847:2053..5777+ (Macrocystis pyrifera P11B4 male)
CGAGAAGGGCGAGGCTAACTTCAGAACTTCAGGCAAGTGGGACCTGCTCG
CGCTGCTGCTAAATCAACATCAACATCAGCGTCAGCATCGAATCTGTCCC
ATCGCCGTGGTGCCTCTTTTCAAGTTATTTCTGTGTCTGTCTCGTTTTTT
GTGAGCTGCCGAGCTTTTGGTTTGTGCAAGTTTTTTTTTTTCAAGCCCCT
GCGGATGGGCAGAATGAAGGATAAACCCTTTTTAAAAACTGCAACCATTG
TTTTGATTCATATTGTACTACTTGGACTTGGTGTGGGGCACGTTTTTTCG
CTACATGGTTCAAGGGTTAAGCTAATCAAACTTCCACATACTGCTGTACC
TGGTATGATACAATAAAAAAGCGTCGTGTGTCAATGTTTTTTGCGTATAT
ATATAGGGTCTCGGTTCTCGTCGGCAGCCGAGCTTTTAGCAAGCTGTTTC
CGTGTCTTTCCCGTTCTGTGTTTTGTTCCCTTGTGCATCTTCGAGCTGTT
TGAATGCTGTTTCTGCGGTGATCTCGTTTCTTCTGGGCAGCCGAACCTTT
CAGCCGGGCTGTCTGTGGCTGCGTGTGTTTGTCGATATTGTTGTGAATCG
TTGATCATTTTACACGCTGTTTTTGCGCTTGTCTCGTTAGTCTGCAAGCC
TCCGAGATGATCACCCGCTGTATTTGCTTGCGTCTCGCTTGCCTTTGGGC
CGCCGAGCCTTTTACAGGCTCTTTCTGCGTCTGCCTCGTCTCTTGGGAGC
GGCGGAGTGCTGTGAAACTATTTTTCCTTGTGTCTCGCTTGCTTTTGAGC
CGCAGACCCTTTGGCAAGCTGCTCCTTCGTCTGCTTGGTTTCTTATGAGC
CACCAATGTTTTTTCGAATCGTTTTTGGCTTTGTGTTTGTTTTCTTCAGA
GTTGTCGAGCTTTTTTCGATGTGTTTGTGCGTCTATGTCATTTCTTGTGA
GCCACCGAGATTTTTTTGGTACTGTGTTTGCATAACTCTAGTTCTCGTTG
AGACGTCTGTTTCGCTTCTTGGGAGCCGCCGAGTCTCTAGGGGACTGATT
CTGCGTGTCCCGTCACTTGTTTGCGCGATCGCGTGTCCGGGCGTTGGTAC
GCTTGCCAGGCGATCCGAATCAAGCACCAGACATTGCGCAATGTCGGCGC
ACAGAGTTGTCGGTTTCGTCCTCAAGGTTGAGTATTAGTAGGAGCAACAG
TGGTTGCTGGGCTGGGTGGGGGCTTATTAACTTAATAAGAACATGCATGT
AGGGGGAATATACCATTAATAATACGTACAGTAGTTTGTACCTGGTAGAC
ATGTAGAGTCCGGCCTACCCCAGGGATCTGCGTTGCTAGAGACAAGTGTT
GCAGACCGTGTGTGCTGTCAGCCATGCCACTACACTGCGGTGCAGTGCGG
AGGAAGAACAATCAGCCATACCACTGCGGTGCGGAACAGGCCGATACGGT
GTGGTCGGGGAGGCTGTTTAGGCTCAAACGTCTGCGATGAACGGGCCTCC
TCAGCTGAGAAACTACAGCAGCAGTACAAGCACTACCCTTACTTTGCTTA
GGGCCAGCGCCCCATTCGTGTGCGGTAGAGTTTTTATGGCACTACATAGC
ACTTTTCCCGGGCTGTTCACAGGCCGGGTCGGGTCGGGTCGGGTAGGGTC
ACCCAACCCGACCCCGAACTGACCCCTGAGATTTCGAAGACCTCCTGACC
TGGCCCGACCCGGCTTGACCCGACCCGACCCAGAGTTGTTGAAGACCTCC
AGACCCGTGGATAGCCCTTTTAACTGTCCCAGTGACAGTGTTTTTTTTTT
GGCGGGACTCCTCGCCCTCATCCTAACCCCTAATCCTAATAATGTTGATA
TTTTGTGGTTCACACTCGTTTCGCTACGTACCTACCCCTGCATCGGTTGA
GGGATTTTGTTTATCTTAGGGTTAGAGTTGCACTTGTTTTTTTATCGCTC
GAGAAGTCACCTTTCACGCGAGGCATAGTAGAAGTCGTTGAGGGAGCCAA
AGAGACTCAAAAAAAGGTGCTTCCCCTCCCTTGGTGTGGCTTCTTTACAC
CAGTACCGGCTAACTTTAGTCGTTGCAGGCCTACGAGCCGATGGGTCATC
CGTCCTAATCGTCTTCCAGTAGAGCTTTCCGCTCCTTCGAAAAAAATTGG
TTGGAACGCACTACTGTGTACGAGACAAAGGGACTACCTCTAACCAATGG
TTGATTATTGACTCAGGCTTAGGGTTAAGGTTAAGTACTTTACATTAAGT
ATCTTCGCCTCGTGCACAGTGTGTGTCGAACATTTTCTAGAGTATGTGCA
TCTCGTCTTCCTCGTCATATTCCATTGACGGCGAAACCCATGCAATACCT
GGATGCTTCTCGCTGCTTGGCCCCGCTTTTGTGTTTCGCTCGCTTTAGGC
CATCTACCCGATCAAGTACCAGGAGAAGCTGCGCGAGTACACCATCCGAG
GCTTGGAGCTGCCGGCTGACCTGTACAGCGTTGACGACGAGAGAGTCTCG
TCCGCCCTGGGGTACACGGCCCACCTGGTCTGCATGCTGGCGAAGTACCT
GCAGGTCCCCCTCCGGTACCAGCTTATCTACAATGCCTCGAGGTGTGCCT
GAGCTTGAAGCCGGGGGAGGGCGGAGACTCGGTACTTGCTGTACCGCTCT
CGTCGACGACATAAGAAGTTTCTGGGCTCTGACGATGCTATCAGACTTAG
GGTTAGATTACCGGCCAGAGCGCAAAAAATACACGGCGTGCATTTTGATG
GCGCCCGATAGAAACCTTTTTTTGAACCTTATCAGTAGTGCAGTCCCGTT
TGGAAAATAAATTACTGAGAGATGTGAGTGGTCTGTCCCCTTACCCTAAA
CGGGAGTGAGAGATGTGAAGGGGCTACGATGGCACCGTGGCACCCACTCC
CTTTATGGGCACAAGCTACTTAAACTTAATAGTTGAGCTAGTGTTGCAGT
AGGAAAAAGGCTGTTTACGGATCGGGTCAACACTCGCGGGTCGGATCGGA
TAGGGTCACCTAACCTGACCCGATCCGACCCGCTCCGCTCCGACCCGCTC
CGACCCGACCCGTGTGTTTTTGAAGACCTCCTGACTCCTTACCGGTGAAC
AGCTCGGGTTAGTTTCCATTTGGAACGGCACGAACGATTTTTGGGGACAA
ACTATACGGAAATAGTGTAGCTTTTTGCAGCGATGATAGGGTTGAGACGC
GCCGGTGATCGAGAGTGGAGCGTTTAAGCTCAGAACGTTTCTGGATCTGG
ATGGCATAGGAATTTTACCCACGCTGACTGGGCCCGGCGTGTCATGTCTA
TTTGTCATATTGGTGGTTTCTGTTTCTATTTTCGAGCTCTTATGTCTGCC
AAATCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGTTCAATTTATATGTTTC
CCCACCCATACCTCCTTGGGGTCAGATCTGCCGTCCGAGATAACGTTACC
GGGGCAGGAGTCGCCTACCCCCTGTTCAGGAGGGGCGTGGAGAAGGAGCG
ATTCGATCGAGGCGTCTATCTCCTCGGCCGAGACGTTGAACAGATGTTGA
CCTCCAGAGGGGTGCCGGCGAAGAGAGGGGGCGGCCAGCTGCTCAGGAAT
CTCGAACGGCTCATGGCGGTGGAGGGGGCTTGACTTTTTTCGGGGTCTGG
ACCATGTTTTAGTTGGACGTTTTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11847:2053..5777+

>mRNA_M-pyrifera_M_contig11847.3816.1 ID=mRNA_M-pyrifera_M_contig11847.3816.1|Name=mRNA_M-pyrifera_M_contig11847.3816.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig11847:2053..5777+ (Macrocystis pyrifera P11B4 male)
ATGCTGGCGAAGTACCTGCAGGTCCCCCTCCGGTACCAGCTTATCTACAA
TGCCTCGAGATGCTGGCGAAGTACCTGCAGGTCCCCCTCCGGTACCAGCT
TATCTACAATGCCTCGAGATCTGCCGTCCGAGATAACGTTACCGGGGCAG
GAGTCGCCTACCCCCTGTTCAGGAGGGGCGTGGAGAAGGAGCGATTCGAT
CGAGGCGTCTATCTCCTCGGCCGAGACGTTGAACAGATGTTGACCTCCAG
AGGGGTGCCGGCGAAGAGAGGGGGCGGCCAGCTGCTCAGGAATCTCGAAC
GGCTCATGGCGGTGGAGGGGGCTTGAATCTGCCGTCCGAGATAACGTTAC
CGGGGCAGGAGTCGCCTACCCCCTGTTCAGGAGGGGCGTGGAGAAGGAGC
GATTCGATCGAGGCGTCTATCTCCTCGGCCGAGACGTTGAACAGATGTTG
ACCTCCAGAGGGGTGCCGGCGAAGAGAGGGGGCGGCCAGCTGCTCAGGAA
TCTCGAACGGCTCATGGCGGTGGAGGGGGCTTGA
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