mRNA_M-pyrifera_M_contig11843.3814.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: D8LJ06_ECTSI (CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ06_ECTSI) HSP 1 Score: 195 bits (495), Expect = 2.060e-55 Identity = 99/107 (92.52%), Postives = 104/107 (97.20%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQQQ 323
VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGS+LISSLRAAHA+G KT+GLDMQQG+VGDM LGVREAYKSKLQVL+SAAEAAEMVLRVDDIIKCAPRQRQQQ
Sbjct: 421 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSDLISSLRAAHAQGAKTAGLDMQQGVVGDMKALGVREAYKSKLQVLISAAEAAEMVLRVDDIIKCAPRQRQQQ 527
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A836CDN2_9STRA (CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN2_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.480e-46 Identity = 85/104 (81.73%), Postives = 96/104 (92.31%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQR 314
VP+T+GK+ALAMEAYARALRQLPTIIADNGGYD SEL++ LRAAHA GQ T+GLDM QG + DMN+LGVRE+YKSKLQVLVSAAEAAEM+LRVDDII+ APRQR
Sbjct: 421 VPSTAGKRALAMEAYARALRQLPTIIADNGGYDSSELVTQLRAAHAAGQTTAGLDMYQGKIADMNDLGVRESYKSKLQVLVSAAEAAEMILRVDDIIRAAPRQR 524
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A812RS29_SYMMI (Cct2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RS29_SYMMI) HSP 1 Score: 161 bits (407), Expect = 5.590e-45 Identity = 82/105 (78.10%), Postives = 94/105 (89.52%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 317
VP TSGK ALAMEA+ARALRQLPTIIADN GYD SELI+ LRAAHA G ++GL+M+ G +G+M ELGVREA+KSKLQVLVSAAEAAEM+LRVDDIIKCAPR+R+
Sbjct: 165 VPTTSGKAALAMEAFARALRQLPTIIADNAGYDSSELITQLRAAHAGGVTSAGLNMKDGCIGNMWELGVREAFKSKLQVLVSAAEAAEMILRVDDIIKCAPRERE 269
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A6V1SR55_HETAK (CCT-beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SR55_HETAK) HSP 1 Score: 162 bits (410), Expect = 4.790e-43 Identity = 78/105 (74.29%), Postives = 93/105 (88.57%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 317
VP +GK+ LAMEAYARALRQLPTIIADN GYD SE+++ LRAAHA G+ T+GLDM+ G +GDMN LG+RE+YKSKLQV+ SA+EAAEM+LRVDDIIKCAPRQR+
Sbjct: 421 VPQVAGKQQLAMEAYARALRQLPTIIADNAGYDSSEMVTQLRAAHAAGRSTAGLDMRAGEIGDMNALGIRESYKSKLQVVASASEAAEMILRVDDIIKCAPRQRE 525
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A7S3LAG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAG8_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.330e-43 Identity = 75/101 (74.26%), Postives = 90/101 (89.11%), Query Frame = 3
Query: 12 TSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQR 314
T GKKALAM A+ARALRQLPTI+ADNGGYD +EL++ LRAAHA G+ T GLDM++G +GDM+ LGVRE+Y+SKLQVL SAAEAAEM+LRVDD+IK APR+R
Sbjct: 70 TPGKKALAMSAFARALRQLPTIVADNGGYDAAELLTQLRAAHAAGKSTYGLDMEKGRIGDMSALGVRESYQSKLQVLSSAAEAAEMILRVDDVIKAAPRRR 170
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A8J2SFG9_9STRA (CCT-beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFG9_9STRA) HSP 1 Score: 161 bits (408), Expect = 9.170e-43 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQQQ 323
VPNT GKKALAME +ARALR LP IIADNGG+D SEL++ LRAAHA+GQ T+GLDM +G V DM ELG+RE++KSKL VLVSAAEAAEM+LRVDDI++CAPR+R+ Q
Sbjct: 419 VPNTPGKKALAMEGFARALRALPAIIADNGGFDASELVTRLRAAHARGQDTAGLDMVKGDVADMTELGIRESFKSKLHVLVSAAEAAEMILRVDDIVRCAPRKREGQ 525
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A6G0XN95_9STRA (CCT-beta n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0XN95_9STRA) HSP 1 Score: 161 bits (408), Expect = 9.300e-43 Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 3
Query: 6 PNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 317
P GKK+LAMEA+ARALRQ+P IIADNGGYD SEL++ LRAAH GQKT+GL+M G +GDM+ LG+RE+YKSK+QVL+SAAEAAEM+LRVDDI+KCAPRQRQ
Sbjct: 422 PGVPGKKSLAMEAFARALRQIPAIIADNGGYDSSELVTQLRAAHFSGQKTAGLNMTNGSIGDMDALGIRESYKSKMQVLLSAAEAAEMILRVDDIVKCAPRQRQ 525
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A7S2PLB1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLB1_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.850e-42 Identity = 75/106 (70.75%), Postives = 90/106 (84.91%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQQ 320
V T GKKA+AMEA+A+ALRQLPTI+ADNGGYD +EL++ LRAAHA G+ + GLDM G V MNELG+ E++KSKLQVL+SA+EAAEM+LRVDDIIK APRQR Q
Sbjct: 62 VAETPGKKAIAMEAFAKALRQLPTIVADNGGYDSAELVTQLRAAHASGKDSYGLDMYNGSVACMNELGIMESFKSKLQVLISASEAAEMLLRVDDIIKAAPRQRDQ 167
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: K3WY33_GLOUD (CCT-beta n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WY33_GLOUD) HSP 1 Score: 159 bits (403), Expect = 4.960e-42 Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 3
Query: 6 PNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 317
P+ GKKALAMEA+ARALRQLP+IIADNGGYD SEL++ LRAAH GQ T+GLDM G VGDM +LG+REA+KSK QVL SAAEAAEM+LRVDDIIKCAPR+R+
Sbjct: 421 PSIPGKKALAMEAFARALRQLPSIIADNGGYDSSELVTQLRAAHHNGQTTAGLDMVNGTVGDMEQLGIREAFKSKKQVLFSAAEAAEMILRVDDIIKCAPRRRE 524
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Match: A0A7S2U8E3_9STRA (CCT-beta n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8E3_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.340e-41 Identity = 78/105 (74.29%), Postives = 93/105 (88.57%), Query Frame = 3
Query: 3 VPNTSGKKALAMEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVGDMNELGVREAYKSKLQVLVSAAEAAEMVLRVDDIIKCAPRQRQ 317
V T GKKALAMEA+ARALRQLP+I+ADNGGYD +EL+S LR AHA+G+ T GLDM G + DM+ELGV+E++KSKLQVL+SA+EAAEM+LRVDDIIKCAPRQRQ
Sbjct: 420 VDATPGKKALAMEAFARALRQLPSIVADNGGYDSAELVSQLRVAHAEGKNTYGLDMYNGKIADMSELGVQESFKSKLQVLLSASEAAEMILRVDDIIKCAPRQRQ 524 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11843.3814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11843.3814.1 >prot_M-pyrifera_M_contig11843.3814.1 ID=prot_M-pyrifera_M_contig11843.3814.1|Name=mRNA_M-pyrifera_M_contig11843.3814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp MEAYARALRQLPTIIADNGGYDGSELISSLRAAHAKGQKTSGLDMQQGIVback to top mRNA from alignment at M-pyrifera_M_contig11843:706..2580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11843.3814.1 ID=mRNA_M-pyrifera_M_contig11843.3814.1|Name=mRNA_M-pyrifera_M_contig11843.3814.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1875bp|location=Sequence derived from alignment at M-pyrifera_M_contig11843:706..2580+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11843:706..2580+ >mRNA_M-pyrifera_M_contig11843.3814.1 ID=mRNA_M-pyrifera_M_contig11843.3814.1|Name=mRNA_M-pyrifera_M_contig11843.3814.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig11843:706..2580+ (Macrocystis pyrifera P11B4 male)back to top |