mRNA_M-pyrifera_M_contig118372.3803.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A5A8CC98_CAFRO (HSF_DOMAIN domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC98_CAFRO) HSP 1 Score: 59.7 bits (143), Expect = 7.860e-9 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPEL 153
EF+ ++LP LC S+S+CSLVRQLNAYSF+K+ + +GFVRG +L
Sbjct: 78 EFTTSILPLLCKSNSMCSLVRQLNAYSFQKVGKSDEVVFKHEGFVRGNADL 128
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A7S0K125_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K125_CAFRO) HSP 1 Score: 59.7 bits (143), Expect = 7.910e-9 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPEL 153
EF+ ++LP LC S+S+CSLVRQLNAYSF+K+ + +GFVRG +L
Sbjct: 58 EFTTSILPLLCKSNSMCSLVRQLNAYSFQKVGKSDEVVFKHEGFVRGNADL 108
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A5A8EGI0_CAFRO (HSF_DOMAIN domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EGI0_CAFRO) HSP 1 Score: 59.7 bits (143), Expect = 8.020e-9 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPEL 153
EF+ ++LP LC S+S+CSLVRQLNAYSF+K+ + +GFVRG +L
Sbjct: 47 EFTTSILPLLCKSNSMCSLVRQLNAYSFQKVGKSDEVVFKHEGFVRGNADL 97
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A812XE87_9DINO (HSFB4A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XE87_9DINO) HSP 1 Score: 56.6 bits (135), Expect = 9.500e-8 Identity = 33/64 (51.56%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRRTLKRR 192
+FS VLP LCNS S CS VRQLN YS+ K D++ I D F + PE L + RRR KRR
Sbjct: 29 DFSTQVLPRLCNSQSFCSFVRQLNGYSWSKADNKRA-IFKHDLFRKDSPENLPLISRRRAAKRR 91
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: C4M5X4_ENTHI (Heat shock transcription factor, putative n=8 Tax=Entamoeba TaxID=5758 RepID=C4M5X4_ENTHI) HSP 1 Score: 56.2 bits (134), Expect = 1.260e-7 Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRR 177
EFSK +LP ++CS VRQLN Y F+KL+ + F + F+ G PELL ++R++
Sbjct: 80 EFSKQILPKFFKHSNICSFVRQLNIYGFRKLETQTGFCFRHESFIAGHPELLPNIQRKK 138
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: L7FJQ6_ENTIV (Heat stress transcription factor A-4C, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=L7FJQ6_ENTIV) HSP 1 Score: 55.1 bits (131), Expect = 3.130e-7 Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRR 177
EFSK +LP ++CS VRQLN Y FKKL+ F D F+ PELL ++R++
Sbjct: 79 EFSKQILPQFFKHSNICSFVRQLNIYGFKKLETPTGFCFRHDSFIADHPELLPNIQRKK 137
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A0A1U586_ENTIV (HSF type DNA-binding domain containing protein (Fragment) n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1U586_ENTIV) HSP 1 Score: 53.9 bits (128), Expect = 7.710e-7 Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRR 177
EFSK +LP ++CS VRQLN Y F+KL+ + F + F+ PELL ++R++
Sbjct: 80 EFSKVILPKFFKHSNICSFVRQLNIYGFRKLETQSGFCFRHESFIADHPELLPNIQRKK 138
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A8J5SC39_ZIZPA (HSF_DOMAIN domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SC39_ZIZPA) HSP 1 Score: 53.1 bits (126), Expect = 1.590e-6 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 4 FSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRRT 180
F+ VLP + S VRQLN Y F+K+D E + ++GF+RGK ELLK +KRRRT
Sbjct: 84 FAMVVLPRYFKHSNFSSFVRQLNTYGFRKVDPER-WEFANEGFLRGKKELLKKIKRRRT 141
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A830D4N7_9LAMI (Heat stress transcription factor a-4a n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D4N7_9LAMI) HSP 1 Score: 52.4 bits (124), Expect = 2.740e-6 Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRR 177
EFS+ +LP ++ S +RQLN Y F+K+D E + ++GFVRG+P LLK + RR+
Sbjct: 48 EFSRDLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQ-WEFANEGFVRGQPNLLKNIHRRK 105
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Match: A0A2T7C148_9POAL (HSF_DOMAIN domain-containing protein n=4 Tax=Panicum TaxID=4539 RepID=A0A2T7C148_9POAL) HSP 1 Score: 52.0 bits (123), Expect = 4.110e-6 Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 4 FSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPELLKTVKRRR 177
F+ +LP + S VRQLN Y F+K+D + + ++GF+RGK ELLKT+KRRR
Sbjct: 88 FANVILPRYFKHSNFSSFVRQLNTYGFRKVDPDR-WEFANEGFLRGKRELLKTIKRRR 144 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118372.3803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118372.3803.1 >prot_M-pyrifera_M_contig118372.3803.1 ID=prot_M-pyrifera_M_contig118372.3803.1|Name=mRNA_M-pyrifera_M_contig118372.3803.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp EFSKTVLPTLCNSDSVCSLVRQLNAYSFKKLDDEPVFISTSDGFVRGKPEback to top mRNA from alignment at M-pyrifera_M_contig118372:286..483+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118372.3803.1 ID=mRNA_M-pyrifera_M_contig118372.3803.1|Name=mRNA_M-pyrifera_M_contig118372.3803.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig118372:286..483+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118372:286..483+ >mRNA_M-pyrifera_M_contig118372.3803.1 ID=mRNA_M-pyrifera_M_contig118372.3803.1|Name=mRNA_M-pyrifera_M_contig118372.3803.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig118372:286..483+ (Macrocystis pyrifera P11B4 male)back to top |