prot_M-pyrifera_M_contig118344.3792.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118344.3792.1
Unique Nameprot_M-pyrifera_M_contig118344.3792.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length183
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118344.3792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 92..127
e-value: 3.1E-6
score: 36.7
coord: 56..91
e-value: 6.4E-6
score: 35.7
coord: 20..55
e-value: 2.5E-6
score: 37.0
coord: 128..163
e-value: 3.8E-7
score: 39.7
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 2..19
e-value: 3.7
score: 8.4
coord: 93..127
e-value: 3.2E-5
score: 24.5
coord: 21..55
e-value: 8.9E-6
score: 26.2
coord: 130..163
e-value: 1.7E-6
score: 28.5
coord: 165..183
e-value: 0.063
score: 14.0
coord: 56..91
e-value: 5.1E-8
score: 33.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..124
e-value: 3.4E-40
score: 140.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 125..183
e-value: 4.6E-18
score: 67.4
NoneNo IPR availablePANTHERPTHR43628FAMILY NOT NAMEDcoord: 110..183
coord: 1..128
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 54..183
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 2..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118344contigM-pyrifera_M_contig118344:2..550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118344.3792.1mRNA_M-pyrifera_M_contig118344.3792.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118344 2..550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118344.3792.1 ID=prot_M-pyrifera_M_contig118344.3792.1|Name=mRNA_M-pyrifera_M_contig118344.3792.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
EKDLSEAVKLYKQAVEGGSEDSMHNLGVCYQKGEGVEMDVAMAARLYRQA
AAGGSADAAYRLGLCCEKGEGVEQDVAEAARLCEQAAEGGSVDAMFYLAW
CYTEGELVGKNLAEAARLYGQAAEGGSMGAMRNLGVCYARGNGVEKDVVE
AARLYRQAVEGGDEEAMYYLGACYARGEGVERD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf