prot_M-pyrifera_M_contig11826.3780.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11826.3780.1
Unique Nameprot_M-pyrifera_M_contig11826.3780.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length182
Homology
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: D8LST1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST1_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 9.410e-85
Identity = 140/175 (80.00%), Postives = 153/175 (87.43%), Query Frame = 0
Query:    7 VYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVEEDAETAVRKALEAEMTKEDQTKEDADGAGAGARKQASL 181
            V  GNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAK+GSVTRDV AAV+AAKGGQ QFRAGKNG LH+G+GKV+F  SDL+ENVRATMVAISN KPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM V+E AE AV+KALEAE+ K     ++ DGAG    ++ASL
Sbjct:  137 VMKGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKLGSVTRDVEAAVRAAKGGQAQFRAGKNGALHMGVGKVSFARSDLIENVRATMVAISNLKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMFVDEGAEAAVKKALEAELAK---AMKEGDGAG---EQRASL 305          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A7S2V3Z6_9STRA (Ribosomal protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.930e-55
Identity = 86/132 (65.15%), Postives = 104/132 (78.79%), Query Frame = 0
Query:    9 AGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 140
            AG +DF+RC+ATP  M VVG+ AR+LGPRGLMPN KVG++  DV AAVK+A  GQ+QFRAGKNGVLH GIGK++FD  D+LEN+R  MVAIS+ KPE  KGKYI  VH+SSTMG G+ ++   VDP S RFM
Sbjct:    5 AGAVDFDRCIATPAAMPVVGKIARILGPRGLMPNPKVGTIATDVKAAVKSALAGQVQFRAGKNGVLHAGIGKLSFDDQDILENIRTFMVAISDAKPEGAKGKYIKGVHMSSTMGPGIKIDTPYVDPGSARFM 136          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A067C8G8_SAPPC (Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8G8_SAPPC)

HSP 1 Score: 182 bits (463), Expect = 1.400e-54
Identity = 85/137 (62.04%), Postives = 110/137 (80.29%), Query Frame = 0
Query:    4 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 140
            L  + AG +DF+RC+ATP+MM++VGR ARVLGPRGLMPN K+G+VT+DV AA+ AAKGGQ++FRA K G++H G+GKV+F    L+EN+RA MVAI + KPE  KGKYI  +HLSSTMG G+ +E   +DPSSP+FM
Sbjct:  125 LADIQAGKLDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVSAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARLLDPSSPQFM 261          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A024UFR5_9STRA (Ribosomal protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UFR5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.940e-54
Identity = 85/137 (62.04%), Postives = 109/137 (79.56%), Query Frame = 0
Query:    4 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 140
            L  + AG +DF+RCVATP+MM++VGR ARVLGPRGLMPN K+G+VT+DV AA+KAA+GGQ++FRA K G++H G+GKV+F    LLEN+RA MVA+   KPE  KGKYI   HLSSTMG+G+ ++   +DPSSP FM
Sbjct:  126 LADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAIKAAQGGQVEFRAEKKGIVHAGVGKVSFSDEALLENIRAFMVAVGEAKPEGAKGKYIKACHLSSTMGRGIRLDTRYLDPSSPHFM 262          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A6G0WIL3_9STRA (Ribosomal protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIL3_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.590e-53
Identity = 87/137 (63.50%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    4 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 140
            L  + AG IDF+RCVATP+MM +VGR ARVLGPRGLMPN K+G+VT+DV AA++AAKGGQ++FRA K G++H G+GKV+F    L+EN+RA MVAI   KPE  KGKYI   HLSSTMG G+ +E   +DPSSP FM
Sbjct:  124 LADIQAGKIDFDRCVATPDMMGLVGRVARVLGPRGLMPNPKLGTVTQDVTAAIQAAKGGQVEFRAEKKGIVHAGVGKVSFSDEALVENIRAFMVAIGEAKPEGAKGKYIKACHLSSTMGPGIRLESRFLDPSSPHFM 260          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A485K7N6_9STRA (Ribosomal protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7N6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 4.510e-53
Identity = 85/137 (62.04%), Postives = 108/137 (78.83%), Query Frame = 0
Query:    4 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 140
            L  + AG +DF+RCVATP+MM++VGR ARVLGPRGLMPN K+G+VT DV AA++AAKGGQ++FRA K GV+H G+GKV+F  + L+EN+RA MVAI   KPE  KGKYI   HLSSTMG G+ ++   +DP+SP FM
Sbjct:  124 LADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTNDVTAAIQAAKGGQVEFRAEKKGVVHAGVGKVSFTDAALIENIRAFMVAIGEAKPEGAKGKYIKACHLSSTMGPGIKLDARYMDPTSPHFM 260          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A4D9CUC3_9STRA (Ribosomal protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUC3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.130e-52
Identity = 88/132 (66.67%), Postives = 106/132 (80.30%), Query Frame = 0
Query:   10 GNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFML 141
            G + F+RCVATPE+M +V R ARVLGPRGLMPN K+G+VT+DVGAAVK+A  GQ QF+A + G++HVG+GKVTF+   LLEN+R  MVA+ N KPE  KGKY+  V L+STMGK VPVEVATVDP S RFML
Sbjct:  171 GELAFDRCVATPEVMPLVSRVARVLGPRGLMPNPKMGTVTKDVGAAVKSAMAGQAQFKADRFGMVHVGVGKVTFEPEALLENIRVLMVALGNAKPEGAKGKYLKGVFLTSTMGKAVPVEVATVDPRSSRFML 302          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A7S4D8H6_HETAK (Ribosomal protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8H6_HETAK)

HSP 1 Score: 179 bits (455), Expect = 1.330e-52
Identity = 86/130 (66.15%), Postives = 108/130 (83.08%), Query Frame = 0
Query:   14 FERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVE 143
            F+R VATPEMM  + + AR+LGPRG+MPNAKVG++T D+ +AVKAA GGQ++FRAGKNGVLH G GKV+F+ ++L+EN++A MVAISN KPE  KGKYI Q HLSSTMG G+ V+VAT+DP SPRF + E
Sbjct:  194 FDRVVATPEMMPHLKKIARILGPRGMMPNAKVGTITEDIESAVKAAMGGQVEFRAGKNGVLHAGFGKVSFEKNNLMENLKAFMVAISNAKPEGAKGKYIKQAHLSSTMGSGIKVDVATIDPGSPRFFVDE 323          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: W4FM96_9STRA (Ribosomal protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM96_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.060e-51
Identity = 82/137 (59.85%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    4 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 140
            L  + AG +DF+RCVATP+MM++VGR ARVLGPRGLMPN K+G+VT+DV AA+ AA GGQ++FRA K G++H G+GKV+F    LL+N+RA MVA+   KPE  KGKY+   HLSSTMG G+ ++   +DPSSP+FM
Sbjct:  125 LADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAITAAMGGQVEFRAEKKGIVHAGVGKVSFSDDALLDNIRAFMVAVGEAKPEGAKGKYVKACHLSSTMGHGIRLDPRQLDPSSPQFM 261          
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A835YR92_9STRA (Ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR92_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.990e-51
Identity = 83/139 (59.71%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    7 VYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVEED 145
            + AG IDFER +ATP+MM +VGR ARVLGPRGLMPN K+G++T+D   AV+A+KGGQ+Q+RA K+G +  G+GKV F    L++NVRA M+AIS  KPE  KGKY+ Q ++SS+MGKGVPV +AT+DPS+ RFML+ ++
Sbjct:  103 IMAGKIDFERLIATPDMMPLVGRVARVLGPRGLMPNPKLGTITKDTAPAVRASKGGQVQYRAFKDGQVLAGLGKVNFTHEQLMDNVRAFMLAISTSKPEGAKGKYMKQAYMSSSMGKGVPVTIATIDPSNGRFMLITQE 241          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST1_ECTSI9.410e-8580.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V3Z6_9STRA4.930e-5565.15Ribosomal protein n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A067C8G8_SAPPC1.400e-5462.04Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=47... [more]
A0A024UFR5_9STRA5.940e-5462.04Ribosomal protein n=4 Tax=Aphanomyces TaxID=100860... [more]
A0A6G0WIL3_9STRA1.590e-5363.50Ribosomal protein n=1 Tax=Aphanomyces euteiches Ta... [more]
A0A485K7N6_9STRA4.510e-5362.04Ribosomal protein n=1 Tax=Aphanomyces stellatus Ta... [more]
A0A4D9CUC3_9STRA1.130e-5266.67Ribosomal protein n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A7S4D8H6_HETAK1.330e-5266.15Ribosomal protein n=1 Tax=Heterosigma akashiwo Tax... [more]
W4FM96_9STRA1.060e-5159.85Ribosomal protein n=3 Tax=Aphanomyces astaci TaxID... [more]
A0A835YR92_9STRA1.990e-5159.71Ribosomal protein n=1 Tax=Tribonema minus TaxID=30... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 11..60
e-value: 3.2E-30
score: 107.2
IPR002143Ribosomal protein L1PIRSFPIRSF002155RPL1p_RPL1a_RPL10e_RPL1ocoord: 6..130
e-value: 5.1E-37
score: 125.3
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 12..122
e-value: 3.3E-25
score: 89.0
NoneNo IPR availableGENE3D3.30.190.20coord: 61..125
e-value: 3.2E-30
score: 107.2
NoneNo IPR availablePANTHERPTHR36427FAMILY NOT NAMEDcoord: 10..134
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 8..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11826contigM-pyrifera_M_contig11826:7332..9549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11826.3780.1mRNA_M-pyrifera_M_contig11826.3780.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11826 7332..9549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11826.3780.1 ID=prot_M-pyrifera_M_contig11826.3780.1|Name=mRNA_M-pyrifera_M_contig11826.3780.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MQPLCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTR
DVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAIS
NHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVEEDAETAV
RKALEAEMTKEDQTKEDADGAGAGARKQASL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016095Ribosomal_L1_3-a/b-sand
IPR002143Ribosomal_L1
IPR028364Ribosomal_L1/biogenesis
IPR023674Ribosomal_L1-like