mRNA_M-pyrifera_M_contig11826.3780.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: D8LST1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST1_ECTSI) HSP 1 Score: 261 bits (666), Expect = 9.410e-85 Identity = 140/175 (80.00%), Postives = 153/175 (87.43%), Query Frame = 1
Query: 19 VYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVEEDAETAVRKALEAEMTKEDQTKEDADGAGAGARKQASL 543
V GNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAK+GSVTRDV AAV+AAKGGQ QFRAGKNG LH+G+GKV+F SDL+ENVRATMVAISN KPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM V+E AE AV+KALEAE+ K ++ DGAG ++ASL
Sbjct: 137 VMKGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKLGSVTRDVEAAVRAAKGGQAQFRAGKNGALHMGVGKVSFARSDLIENVRATMVAISNLKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMFVDEGAEAAVKKALEAELAK---AMKEGDGAG---EQRASL 305
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A7S2V3Z6_9STRA (Ribosomal protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z6_9STRA) HSP 1 Score: 179 bits (455), Expect = 4.930e-55 Identity = 86/132 (65.15%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 25 AGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 420
AG +DF+RC+ATP M VVG+ AR+LGPRGLMPN KVG++ DV AAVK+A GQ+QFRAGKNGVLH GIGK++FD D+LEN+R MVAIS+ KPE KGKYI VH+SSTMG G+ ++ VDP S RFM
Sbjct: 5 AGAVDFDRCIATPAAMPVVGKIARILGPRGLMPNPKVGTIATDVKAAVKSALAGQVQFRAGKNGVLHAGIGKLSFDDQDILENIRTFMVAISDAKPEGAKGKYIKGVHMSSTMGPGIKIDTPYVDPGSARFM 136
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A067C8G8_SAPPC (Ribosomal protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8G8_SAPPC) HSP 1 Score: 182 bits (463), Expect = 1.400e-54 Identity = 85/137 (62.04%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 10 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 420
L + AG +DF+RC+ATP+MM++VGR ARVLGPRGLMPN K+G+VT+DV AA+ AAKGGQ++FRA K G++H G+GKV+F L+EN+RA MVAI + KPE KGKYI +HLSSTMG G+ +E +DPSSP+FM
Sbjct: 125 LADIQAGKLDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVSAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARLLDPSSPQFM 261
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A024UFR5_9STRA (Ribosomal protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UFR5_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.940e-54 Identity = 85/137 (62.04%), Postives = 109/137 (79.56%), Query Frame = 1
Query: 10 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 420
L + AG +DF+RCVATP+MM++VGR ARVLGPRGLMPN K+G+VT+DV AA+KAA+GGQ++FRA K G++H G+GKV+F LLEN+RA MVA+ KPE KGKYI HLSSTMG+G+ ++ +DPSSP FM
Sbjct: 126 LADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAIKAAQGGQVEFRAEKKGIVHAGVGKVSFSDEALLENIRAFMVAVGEAKPEGAKGKYIKACHLSSTMGRGIRLDTRYLDPSSPHFM 262
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A6G0WIL3_9STRA (Ribosomal protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WIL3_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.590e-53 Identity = 87/137 (63.50%), Postives = 107/137 (78.10%), Query Frame = 1
Query: 10 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 420
L + AG IDF+RCVATP+MM +VGR ARVLGPRGLMPN K+G+VT+DV AA++AAKGGQ++FRA K G++H G+GKV+F L+EN+RA MVAI KPE KGKYI HLSSTMG G+ +E +DPSSP FM
Sbjct: 124 LADIQAGKIDFDRCVATPDMMGLVGRVARVLGPRGLMPNPKLGTVTQDVTAAIQAAKGGQVEFRAEKKGIVHAGVGKVSFSDEALVENIRAFMVAIGEAKPEGAKGKYIKACHLSSTMGPGIRLESRFLDPSSPHFM 260
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A485K7N6_9STRA (Ribosomal protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7N6_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.510e-53 Identity = 85/137 (62.04%), Postives = 108/137 (78.83%), Query Frame = 1
Query: 10 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 420
L + AG +DF+RCVATP+MM++VGR ARVLGPRGLMPN K+G+VT DV AA++AAKGGQ++FRA K GV+H G+GKV+F + L+EN+RA MVAI KPE KGKYI HLSSTMG G+ ++ +DP+SP FM
Sbjct: 124 LADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTNDVTAAIQAAKGGQVEFRAEKKGVVHAGVGKVSFTDAALIENIRAFMVAIGEAKPEGAKGKYIKACHLSSTMGPGIKLDARYMDPTSPHFM 260
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A4D9CUC3_9STRA (Ribosomal protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUC3_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.130e-52 Identity = 88/132 (66.67%), Postives = 106/132 (80.30%), Query Frame = 1
Query: 28 GNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFML 423
G + F+RCVATPE+M +V R ARVLGPRGLMPN K+G+VT+DVGAAVK+A GQ QF+A + G++HVG+GKVTF+ LLEN+R MVA+ N KPE KGKY+ V L+STMGK VPVEVATVDP S RFML
Sbjct: 171 GELAFDRCVATPEVMPLVSRVARVLGPRGLMPNPKMGTVTKDVGAAVKSAMAGQAQFKADRFGMVHVGVGKVTFEPEALLENIRVLMVALGNAKPEGAKGKYLKGVFLTSTMGKAVPVEVATVDPRSSRFML 302
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A7S4D8H6_HETAK (Ribosomal protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8H6_HETAK) HSP 1 Score: 179 bits (455), Expect = 1.330e-52 Identity = 86/130 (66.15%), Postives = 108/130 (83.08%), Query Frame = 1
Query: 40 FERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVE 429
F+R VATPEMM + + AR+LGPRG+MPNAKVG++T D+ +AVKAA GGQ++FRAGKNGVLH G GKV+F+ ++L+EN++A MVAISN KPE KGKYI Q HLSSTMG G+ V+VAT+DP SPRF + E
Sbjct: 194 FDRVVATPEMMPHLKKIARILGPRGMMPNAKVGTITEDIESAVKAAMGGQVEFRAGKNGVLHAGFGKVSFEKNNLMENLKAFMVAISNAKPEGAKGKYIKQAHLSSTMGSGIKVDVATIDPGSPRFFVDE 323
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: W4FM96_9STRA (Ribosomal protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM96_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.060e-51 Identity = 82/137 (59.85%), Postives = 107/137 (78.10%), Query Frame = 1
Query: 10 LCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFM 420
L + AG +DF+RCVATP+MM++VGR ARVLGPRGLMPN K+G+VT+DV AA+ AA GGQ++FRA K G++H G+GKV+F LL+N+RA MVA+ KPE KGKY+ HLSSTMG G+ ++ +DPSSP+FM
Sbjct: 125 LADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAITAAMGGQVEFRAEKKGIVHAGVGKVSFSDDALLDNIRAFMVAVGEAKPEGAKGKYVKACHLSSTMGHGIRLDPRQLDPSSPQFM 261
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Match: A0A835YR92_9STRA (Ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR92_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.990e-51 Identity = 83/139 (59.71%), Postives = 111/139 (79.86%), Query Frame = 1
Query: 19 VYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRDVGAAVKAAKGGQLQFRAGKNGVLHVGIGKVTFDTSDLLENVRATMVAISNHKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMLVEED 435
+ AG IDFER +ATP+MM +VGR ARVLGPRGLMPN K+G++T+D AV+A+KGGQ+Q+RA K+G + G+GKV F L++NVRA M+AIS KPE KGKY+ Q ++SS+MGKGVPV +AT+DPS+ RFML+ ++
Sbjct: 103 IMAGKIDFERLIATPDMMPLVGRVARVLGPRGLMPNPKLGTITKDTAPAVRASKGGQVQYRAFKDGQVLAGLGKVNFTHEQLMDNVRAFMLAISTSKPEGAKGKYMKQAYMSSSMGKGVPVTIATIDPSNGRFMLITQE 241 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11826.3780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11826.3780.1 >prot_M-pyrifera_M_contig11826.3780.1 ID=prot_M-pyrifera_M_contig11826.3780.1|Name=mRNA_M-pyrifera_M_contig11826.3780.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp MQPLCRVYAGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKVGSVTRback to top mRNA from alignment at M-pyrifera_M_contig11826:7332..9549- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11826.3780.1 ID=mRNA_M-pyrifera_M_contig11826.3780.1|Name=mRNA_M-pyrifera_M_contig11826.3780.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2218bp|location=Sequence derived from alignment at M-pyrifera_M_contig11826:7332..9549- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11826:7332..9549- >mRNA_M-pyrifera_M_contig11826.3780.1 ID=mRNA_M-pyrifera_M_contig11826.3780.1|Name=mRNA_M-pyrifera_M_contig11826.3780.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig11826:7332..9549- (Macrocystis pyrifera P11B4 male)back to top |