mRNA_M-pyrifera_M_contig11825.3779.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11825.3779.1
Unique NamemRNA_M-pyrifera_M_contig11825.3779.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: D8LM44_ECTSI (Similar to jouberin isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM44_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 7.270e-117
Identity = 186/248 (75.00%), Postives = 206/248 (83.06%), Query Frame = 1 
Query:   28 RGSKDE-PRLVCALQHAPPCFVYAAVFQPA-VLDLTRGTTAAGPNNDSPRSEASECALVVTGAYDRQLRLWD----VPMTASHGGRAKMLGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDYN----VQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPLQVSGGVCSI 741
            RG KD+ PRL C LQHAPPCFVYAAVFQPA V+D TRGTTA   ++ SP SE+SECALVVTGAYDR+LRLWD    V   A  GGRAKMLGTLS+K+VHESHVN+IVYD ++SRLYSGDG G IVVWRR  GG+ GVEDY     VQHADL+GKAITSLAL  RLRRGQLLVQAHGNTLRLLDLGTY+LVNPGFAGG  + SL+RASFSPDGRFVVSGSE G+VRVWE+QEGKRV+TPLQ  G  C +
Sbjct:  423 RGGKDDGPRLACVLQHAPPCFVYAAVFQPAEVMDRTRGTTATALDHQSPSSESSECALVVTGAYDRRLRLWDTTAAVATPAREGGRAKMLGTLSSKMVHESHVNAIVYDSRNSRLYSGDGAGVIVVWRRGGGGQGGVEDYGILRKVQHADLIGKAITSLALAPRLRRGQLLVQAHGNTLRLLDLGTYRLVNPGFAGGATAKSLIRASFSPDGRFVVSGSETGRVRVWESQEGKRVKTPLQTLGTACCL 670
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A835YME3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YME3_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.900e-47
Identity = 117/292 (40.07%), Postives = 149/292 (51.03%), Query Frame = 1 
Query:   46 PRLVCALQHAPPCFVYAAVFQPAVLDLT----------------------------------RGTTAAGPNNDSPRSEASECALVVTGAYDRQLRLWD----------------VPMTASHGGRAKM-----LGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTS-----GGRAGVEDYNV----QHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPLQVSGG 729
            PRL+ ALQH+PP +VY AVFQPA+  +                                   RG + +  +  S     SECAL       R LR  D                VP  A  GG         LG L  + VH + VN++ YD ++ RLYSGD  G ++VWRR +     GGR G  +Y V      ADL G  IT+LAL    R  QLLVQA GN  RLLDL TYQLVNPG++G DA+ S +RA FSPDG FV +G+E G++R+W++Q G+RV  PL  +GG
Sbjct:  831 PRLLHALQHSPPTYVYCAVFQPAMPVVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXAARGHVRGRSRSRGSFSSLAPFMSECALA------RPLRKTDNALSVPRLCRYSAAAGVPACAIAGGXXXXXXXAALGVLGGRAVHGARVNALAYDARNGRLYSGDAAGVVLVWRRAAVAAPGGGRGGAGEYGVLRRVARADLCGAPITALALAPHRRLAQLLVQAQGNVTRLLDLATYQLVNPGYSGCDATRSFIRAVFSPDGAFVAAGAEDGRLRMWDSQSGRRVAAPLPRAGG 1116
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A7S2BSZ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSZ3_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.510e-34
Identity = 94/246 (38.21%), Postives = 125/246 (50.81%), Query Frame = 1 
Query:   31 GSKDE------PRLVCALQHAPPCFVYAAVFQPAVLDLTRGTTAAGPNNDSPRSEASECALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKV-----VHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDYNVQ---HADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPLQVSG 726
              KDE      P+LV  LQH PPCF+Y+A F P V      + AA  N D P         VVT A+D ++R++D     + G    +LG   + V     +H  HVN++  D +  RLY+GDG G I +WRR   G         Q   H+    K+IT L L    +R  +LV AHGN L L+D  T + +   F G +   S++ A FSPDGRFVV+GSE G   VW+A  G R+ T L   G
Sbjct:  629 AKKDELINLQRPKLVSTLQHTPPCFIYSAAFVPIVTP----SKAAKANGDGP-------GQVVTVAFDGKVRMFD----GTTGKEKGLLGDGYDGVPLTGSIHARHVNALAVDKRMGRLYTGDGDGIIWIWRRAGDGDKPKHFQPYQPLTHSTFKKKSITHLCLHPVRKRSHVLVMAHGNVLVLIDA-TNKALLVNFHGSNTRSSMISAVFSPDGRFVVAGSEDGHAHVWDAVSGDRISTNLSNFG 858
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A1V9Z811_9STRA (Jouberin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z811_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.130e-28
Identity = 69/174 (39.66%), Postives = 107/174 (61.49%), Query Frame = 1 
Query:  193 LVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDYNVQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPL 714
            + +TG++D Q+RLW            K L  L+   +H S VN++  DPK+ RL+SGD  G + VW+  +     ++   ++H DL+GK+ITS+    +  RGQLLVQA  NTL   +L +Y L+N G+ G   + SL+++SFSPDGR+VVSGSE G V ++ +  G+R+ + +
Sbjct:  443 IALTGSFDGQIRLWSTRT-------GKCLNALTP--IHASRVNTLRMDPKTQRLFSGDATGVVNVWQEKNSTFELIK--TIKHVDLMGKSITSMQFHPK--RGQLLVQAQPNTLLQFELRSYLLLNKGYTGIKCTTSLIKSSFSPDGRYVVSGSEDGAVFMFSSLNGQRISSSM 603
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A7S2SPM8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPM8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 8.540e-27
Identity = 80/228 (35.09%), Postives = 113/228 (49.56%), Query Frame = 1 
Query:   28 RGSKDEPRLVCA--LQHAPPCFVYAAVFQPAVLDLTRGTTAAGPNNDSPRSEASECALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSN-KVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDY-----NVQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQ 687
            +G  +E +  C   LQH PP +VY   F P                      A++   V TGAYD+ +RLWD     S G   ++LG L      H+SH+N++ +    +RL SGDG G I +WR  +G +    D       +   DL G+AIT++ +    R   LLV A  N +RL +L  Y  ++ GF G   S SL+RA FSPDG +V+SG E G+  VW  +
Sbjct:  168 KGEIEEVQAGCEFILQHTPPTYVYTVQFHPL---------------------AADPPFVATGAYDQFIRLWD----CSSG---ELLGKLDRGNAHHKSHINTLCFTNDGNRLISGDGNGIINIWRLETGRQPSNPDAWHLARKIDDPDLRGRAITTVQVHPVERL--LLVSAQQNVIRLFELRRYTRMHQGFIGAPVSQSLIRACFSPDGEYVMSGGEDGKPHVWHTK 365
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A2R5GAQ7_9STRA (Jouberin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAQ7_9STRA)

HSP 1 Score: 118 bits (296), Expect = 9.780e-27
Identity = 80/223 (35.87%), Postives = 114/223 (51.12%), Query Frame = 1 
Query:   28 RGSKDEPRLVCALQHAPPCFVYAAVFQPAVLDLTRGTTAAGPNNDSPRSEASECALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSN-KVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDY-----NVQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVW 678
            RG + +P+ +  LQHAPP +VY A F P+                     A   A++ TG YD  +RLWD            +LG L   +  H++ VN++ +    +R+ SGDG G + VWR  +G +A   D       +   D  GK+ITS+ +    R   LLV A  NT+RL +L  Y  V+ GF G   S SLVRA FSPDG++V+SG+E G+  +W
Sbjct:  396 RGPQ-KPKCLHVLQHAPPTYVYTARFHPS---------------------ARRPAILATGGYDGFVRLWDC-------STGTLLGKLDRGRAHHKARVNALCFTNDGNRIISGDGDGVVNVWRLETGRQAANPDAWHLARKLDDPDFRGKSITSVQVHPVERL--LLVSAQQNTIRLFELRRYTRVHDGFIGAPVSHSLVRACFSPDGQYVLSGAEDGKPHLW 587
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A067CJS3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJS3_SAPPC)

HSP 1 Score: 117 bits (292), Expect = 3.060e-26
Identity = 72/180 (40.00%), Postives = 104/180 (57.78%), Query Frame = 1 
Query:  193 LVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDYNVQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPLQVSGGV 732
            L  TGA D  +RLWD+   A  G     L        H   VN++ ++PKS RL+SGD  G I VW+    G +      ++H DL+GK ITS  L  +  R QLLVQA  NTL   +L +Y ++N G++G   + ++V+++FSPDGRFV SGSE G V ++ +  G+R+  P  + GG+
Sbjct:  431 LGATGALDGIVRLWDLGFEARQGRPVANLHP-----AHTVRVNALRFEPKSQRLFSGDAAGIICVWQPK--GTSFELIKTLKHHDLLGKCITSFQLHPK--RSQLLVQAQPNTLLQFELRSYLVLNKGYSGLTVTSAMVKSAFSPDGRFVASGSEDGAVYLYSSLNGRRI--PSSMWGGI 599
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A1V9YPZ2_9STRA (Jouberin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPZ2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 5.740e-26
Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 1 
Query:  190 ALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDYNVQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPLQVSGGV 732
            A  VTGA D  +R+W    T   G  A  L        H S VN++  D K+ RLYSGD  G I VW+  S G        ++H DL+GK+ITS  L  +  RGQLLVQA  +TL   +L +Y L+N G+ G   S +LVR++FSPDGRFV SGSE G   ++ +  G+R+  P  + GGV
Sbjct:  444 AFGVTGALDGFVRIW----TLESGTLATALNP-----PHPSRVNALRLDVKTQRLYSGDATGVIHVWQ--SKGSTFELIKTLKHPDLIGKSITSFQLHPK--RGQLLVQAQPSTLLQFELRSYLLLNKGYCGMTISSTLVRSTFSPDGRFVASGSEDGAAYLFSSLNGQRI--PSSMWGGV 609
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A8J2SBZ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBZ0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.330e-24
Identity = 76/224 (33.93%), Postives = 110/224 (49.11%), Query Frame = 1 
Query:   37 KDEPRLVCALQHAPPCFVYAAVFQPAVLDLTRGTTA-AGPNNDSPRSEASECALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDY--------NVQHADLVGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASGSLVRASFSPDGRFVVSGSEKGQVRVWE 681
            K  PR++C        F YAA+F       TR          D  ++    C  V+TGA++  +  WD P T+      +  G L N++ H+  V+ +  D +S R++S D  G I VWR    G     DY         ++H D   K I S+ +  R RR QLLVQA  +TL+L+D+ T Q V   F G      ++RA FSPDG +V++GSE G+V  W+
Sbjct:  508 KYAPRMLCIFHEPSAQFFYAAIFFMKNNSATRALPLYTQSKEDDGKNHQRICPHVLTGAFNGAVAHWD-PRTS------QCQGLLGNRIAHKGRVHCLESDRRSGRVFSADSNGIIFVWRCERDG-----DYPSDFTIIRKIEHRDFRNKPIVSMMIRPRRRRVQLLVQAQASTLKLVDVTTSQPVAH-FKGNLVRAGVIRAKFSPDGTYVLAGSEDGKVYAWD 718
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BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Match: A0A7S3USY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USY7_HETAK)

HSP 1 Score: 103 bits (257), Expect = 3.110e-24
Identity = 67/163 (41.10%), Postives = 85/163 (52.15%), Query Frame = 1 
Query:   34 SKDEPRLVCALQHAPPCFVYAAVFQPAVLDLTRGTTAAGPNNDSPRSEASECALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKVVHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGR-----AGVEDYNVQHADLVGKAITSLALTSRLRRGQL 507
                P LV  LQH PP FVY  +F            AA  +   PR        V+T  +DR+L LWD       GGR K  GTL   V H+SHVN++ ++ K+ RLYS DG G I+VWR+T  G      + V +  V+H  L+GKA+T LAL    RRGQL
Sbjct:    3 QTQPPHLVVTLQHRPPTFVYCGLFH----------CAAAGDPAPPRPHRH----VLTAGFDRRLHLWDT----RRGGRHK--GTLGGLVQHKSHVNALCWEAKTGRLYSADGAGVILVWRKTGPGTEPQHFSAVRE--VRHPQLLGKAVTGLALRPLRRRGQL 143
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11825.3779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM44_ECTSI7.270e-11775.00Similar to jouberin isoform 1 n=1 Tax=Ectocarpus s... [more]
A0A835YME3_9STRA2.900e-4740.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2BSZ3_9STRA3.510e-3438.21Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A1V9Z811_9STRA4.130e-2839.66Jouberin n=1 Tax=Thraustotheca clavata TaxID=74557... [more]
A0A7S2SPM8_9STRA8.540e-2735.09Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GAQ7_9STRA9.780e-2735.87Jouberin n=1 Tax=Hondaea fermentalgiana TaxID=2315... [more]
A0A067CJS3_SAPPC3.060e-2640.00Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A1V9YPZ2_9STRA5.740e-2643.09Jouberin n=1 Tax=Achlya hypogyna TaxID=1202772 Rep... [more]
A0A8J2SBZ0_9STRA1.330e-2433.93Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3USY7_HETAK3.110e-2441.10Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11825contigM-pyrifera_M_contig11825:1216..7693 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.8
Seed ortholog evalue1e-96
Seed eggNOG ortholog2880.D8LM44
Preferred nameAHI1
KEGG koko:K11143,ko:K16740
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001655,GO:0001738,GO:0001750,GO:0001754,GO:0001822,GO:0001947,GO:0002009,GO:0002090,GO:0002092,GO:0002791,GO:0003002,GO:0003007,GO:0003143,GO:0003407,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005911,GO:0005912,GO:0005929,GO:0006355,GO:0006357,GO:0006810,GO:0006903,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0008104,GO:0008150,GO:0009605,GO:0009653,GO:0009790,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010720,GO:0010827,GO:0010829,GO:0010842,GO:0010941,GO:0010975,GO:0010976,GO:0015630,GO:0016043,GO:0016192,GO:0019219,GO:0019222,GO:0021510,GO:0022008,GO:0022406,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030100,GO:0030154,GO:0030182,GO:0030856,GO:0030858,GO:0030860,GO:0030862,GO:0030902,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031667,GO:0032094,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034762,GO:0034763,GO:0035050,GO:0035239,GO:0035295,GO:0035844,GO:0035845,GO:0035869,GO:0036038,GO:0036064,GO:0039007,GO:0039008,GO:0039019,GO:0039020,GO:0039022,GO:0039023,GO:0040008,GO:0042221,GO:0042461,GO:0042462,GO:0042670,GO:0042802,GO:0042981,GO:0042995,GO:0043005,GO:0043010,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043583,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044782,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045807,GO:0045893,GO:0045927,GO:0045935,GO:0045944,GO:0046324,GO:0046325,GO:0046530,GO:0046548,GO:0046549,GO:0048259,GO:0048260,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048546,GO:0048562,GO:0048565,GO:0048568,GO:0048592,GO:0048593,GO:0048598,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048793,GO:0048839,GO:0048856,GO:0048869,GO:0050708,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051051,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0051960,GO:0051962,GO:0055123,GO:0060041,GO:0060042,GO:0060219,GO:0060255,GO:0060271,GO:0060284,GO:0060322,GO:0060429,GO:0060548,GO:0060562,GO:0060627,GO:0060972,GO:0060993,GO:0061326,GO:0061333,GO:0061371,GO:0065001,GO:0065007,GO:0070121,GO:0070161,GO:0070201,GO:0070727,GO:0070925,GO:0070986,GO:0071599,GO:0071840,GO:0072001,GO:0072006,GO:0072009,GO:0072028,GO:0072073,GO:0072078,GO:0072080,GO:0072088,GO:0072114,GO:0072176,GO:0072178,GO:0072359,GO:0080090,GO:0090087,GO:0090596,GO:0097458,GO:0097711,GO:0097730,GO:0097731,GO:0097733,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0140056,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:1905330,GO:1905332,GO:1905515,GO:1990403,GO:2000026,GO:2000027,GO:2000112,GO:2001141
EggNOG free text desc.WD repeat-containing protein
EggNOG OGsKOG0266@1,KOG0266@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Exons5
Model size741
Cds size741
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11825.3779.1prot_M-pyrifera_M_contig11825.3779.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11825 1216..7693 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815702.1137161-CDS-M-pyrifera_M_contig11825:1215..13601622815702.1137161-CDS-M-pyrifera_M_contig11825:1215..1360Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 1216..1360 +
1692277529.229272-CDS-M-pyrifera_M_contig11825:1215..13601692277529.229272-CDS-M-pyrifera_M_contig11825:1215..1360Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 1216..1360 +
1622815702.1348152-CDS-M-pyrifera_M_contig11825:2703..28551622815702.1348152-CDS-M-pyrifera_M_contig11825:2703..2855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 2704..2855 +
1692277529.2425318-CDS-M-pyrifera_M_contig11825:2703..28551692277529.2425318-CDS-M-pyrifera_M_contig11825:2703..2855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 2704..2855 +
1622815702.148197-CDS-M-pyrifera_M_contig11825:5286..54211622815702.148197-CDS-M-pyrifera_M_contig11825:5286..5421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 5287..5421 +
1692277529.25242-CDS-M-pyrifera_M_contig11825:5286..54211692277529.25242-CDS-M-pyrifera_M_contig11825:5286..5421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 5287..5421 +
1622815702.1578782-CDS-M-pyrifera_M_contig11825:6534..66631622815702.1578782-CDS-M-pyrifera_M_contig11825:6534..6663Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 6535..6663 +
1692277529.270099-CDS-M-pyrifera_M_contig11825:6534..66631692277529.270099-CDS-M-pyrifera_M_contig11825:6534..6663Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 6535..6663 +
1622815702.1713717-CDS-M-pyrifera_M_contig11825:7513..76931622815702.1713717-CDS-M-pyrifera_M_contig11825:7513..7693Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 7514..7693 +
1692277529.2786934-CDS-M-pyrifera_M_contig11825:7513..76931692277529.2786934-CDS-M-pyrifera_M_contig11825:7513..7693Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11825 7514..7693 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11825.3779.1

>prot_M-pyrifera_M_contig11825.3779.1 ID=prot_M-pyrifera_M_contig11825.3779.1|Name=mRNA_M-pyrifera_M_contig11825.3779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
MLVFCLLLCRGSKDEPRLVCALQHAPPCFVYAAVFQPAVLDLTRGTTAAG
PNNDSPRSEASECALVVTGAYDRQLRLWDVPMTASHGGRAKMLGTLSNKV
VHESHVNSIVYDPKSSRLYSGDGVGAIVVWRRTSGGRAGVEDYNVQHADL
VGKAITSLALTSRLRRGQLLVQAHGNTLRLLDLGTYQLVNPGFAGGDASG
SLVRASFSPDGRFVVSGSEKGQVRVWEAQEGKRVRTPLQVSGGVCSI
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mRNA from alignment at M-pyrifera_M_contig11825:1216..7693+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11825.3779.1 ID=mRNA_M-pyrifera_M_contig11825.3779.1|Name=mRNA_M-pyrifera_M_contig11825.3779.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6478bp|location=Sequence derived from alignment at M-pyrifera_M_contig11825:1216..7693+ (Macrocystis pyrifera P11B4 male)
ATGCTTGTTTTTTGTTTGCTTCTCTGCAGGGGCAGCAAAGACGAGCCGCG
GCTGGTGTGCGCGCTTCAGCATGCACCGCCCTGTTTTGTCTACGCAGCCG
TGTTCCAGCCCGCAGTCCTTGACCTCACGCGGGGCACCACCGCAGGTGAG
CTATATAGAGGCAGCGCGCATAGCGCTGTGTCTCGGGTTTTTCTCCTGTG
GGTGTTGCTGTTGTTGCTTTCGGTGTTCTCTCTGTTGTTGTTGTTGACGA
TGCTGTTGCTGTTTCTGCTGTCGTTGCTGTCGTTGTTGTCGTTGTTGCTG
CTGCTGCTGATATTGTGGTGATGGCGGTGTTTTTTTTTATGCTTTTTTGT
CGACACTACAAGTCCAATGGCAACAATTACAGACCCCAATTACTCTGGAG
GGGCGAACAGGAACGGCGTTTTTCGCGCACAAGTTGAAACGACACACACA
GCTGGTGAACAGTGGACACTTAAATGTATGCGCGGGTTCTTCATCATCTG
CGTTGCCCCCCAAGTCCACGAAGGTAGATTGCGCGCACGACAGTTTTCGC
CGCGTGCGATGGTACGGGCACACGCGCATACATATAATATGGACTCGCTC
GAGAAAACATTCGGGCAGCACGTACACCACCACTGACGGGTGGATGGGAT
GTTCTGAAGAATTTCGTGCCCACCTCCGCTCAAAAGTTTAGGGAGAGAGA
AGAAGGACTGCCCCTCTCTGCGGTAGAAATCCCCAAGATAATTCGATGCC
TTCCGCGGTTCCATTATTTGTGCGAAAGCTTGCCCCCCTGATGGGATCGG
AATTTTAGCTGTTCATACTTTCGCCATCTGGGTGCTCATCGTCATCCCTC
TTGCCATGCGTTACACGTGGCGAAACGTGAAGCAAAAAATATTTTTTTCT
GTCGAAAATCAAATCGTGTCCTTAAGTCGACGCGGTGGCAGAGTAGAGTA
GATATATACATATACATATACCTGGTACCCTGTATCGTATAGTAGCACAA
GTTTGGCGGCGGGACGACCGCCGGTTCGCAATAATCCTTTCTCGCACGTC
CACAAGCCCACAAAAGTAACGGCCATTCACAAACGAAAAGTAAAGATAAG
TGTTTGTATTACATACCAGGTATAGTGTAGCACAGACACCGCGCGTTTCC
TGCGAGTTGCGAGTTGCGAAGCGATCGCAGTCAGGGTAACGAATCCAGGC
TGTACCCGCATAAATAACTTAACCTTCACCGCGTATCCACACATTCGACC
ACAAAAACCGAGTAGGAGTGCACCCGAAAATAGCCATGTAGACTAAACAA
CCCGCCGCATGGGTATGAGAAACAAAATTCGGAACCTTCGTATTGCGGGG
GACCGTAGTAAATAGGACCAATATTGTTAGTATAAATAGGTAAATATACA
GGTTTTTGTGTGCACCCTAGGTCCTATTTACTATGGTCCCCCGCAGTAGC
AATATATCTCGTTCGTCCCACCCGCGCGCGCGGTGCAGCAGGTCCAAATA
ATGACTCTCCAAGGTCGGAAGCAAGCGAGTGCGCGCTGGTTGTGACCGGG
GCTTACGACCGGCAACTCCGGCTGTGGGACGTGCCGATGACAGCGTCGCA
TGGGGGGCGGGCGAAGATGCTCGGGACGTTGTCGAACAAGGTACGTGCTA
CGACTGCACTGTACCGTGCCGATAAACTCGGACAACATTTTTAAGGAGTG
AAGACAGGGGCGGAAGGTTTAAAATACCTGGTACCTTTTTTTAAAAAAAG
CGTTGAGCGCACACGGGGACGGGTGCCATGTTTTTTTGTTTTTTTTTTCG
GCGCTCGATATTTCCCAGAACGGGAAGGTTGCCGACATGATACCGAACGA
ACAAGGCGTCGTCGGAAAAATATCTGGTCGAGAGGGAGCGCCTTTCCGAA
AAAAAGAAGGCTTGACTGTTCGGCTCATTCTTATCGGAGAGTTTTTTTTT
TTTTTAAGTTCCATATTTTCGTCCTATTTTTTCAATCTTCCAGATTTTCC
TGATCGTTTTTCCAGATGTGTGAAGTATATAGTTTTCTTTTGAAGAATTT
CACGAATAGTGACAAAACGCCTACGTATCTTGACACATGTTTCCTTTTTT
CTTCCAAACTTGAGAATTTTTGGGGAAAAAAACTCTCCAATAAGAATAAG
CCTTAGCACCCTTTACCGCTGTTGAAAAAACGAGAGAGCGCTTAAAAACG
ATCGCACTCCTCTCTGTGCAACGTCAACGGTATGAACAGGTAAAGCGAGA
AGGAAGGGTGGAGCAAGGACATCCAGTGGAGTTGTAGTTGGATCCATTTT
GAGCCGGAAGAGGAGGAGTGGGACATACTTACACGTTGAAGGGTCTTTTT
GCGTGGTGTTTCCCTCTGAGGTTTTCTGATTTCCTTGTTCTTCTTGTTCT
TCTTGTTCTTCCTGTCCGTCTTACTCTTCTTGTTGTTCCTGTCCTTCTTG
TTCTTCTTGTCGTTCTTTTTGTTGTTCTTGTGCTTCCTCTTCTTCTTCTG
TCTGAGTGATCGACGTTGAAAAAGCTCATCGTACCGCACATTGCCAGATG
GCAAAAAATAGTACGAACTACGGTATGTATAGATTTTACTACTGCAGTTC
GTTTCCAAGTTAACAACCATATACGAGTTCACGTAAGCTTATTTTTCGTC
ATGATACGGTACATATATATCGCGTAGCGGCGCTGGTGTTACTTCTCGTG
GCTGCCTCTCCCTCTCCCTTTTTTGTTTTTGTTTCGACCGTTCGTTGTCA
AAAGTCTCCTCAAAGAGTGAGCATTTTTCTTTGTGCAGGCAGGAGGGTCA
GCAGTTCTTGGCAACACGATGGTGATGATGGTGATTTCCCCACATTAGCA
CTTCCCTGAAATCCTGTCTGTCTGTGATCACAAAAGCAGACTGCGACTTA
TATTCCTTGCCGGGGAAGGTTAAGGCGTGCGGAGTGCCTTTTTTTGTGTG
TGTGACGGCTCTGCTCTGCACCAAATGGCAGCATTCTTCATGCTTCACAT
TTCCTACTCGCGTGCGGCCCGGGTTTCTCCGGTTTTTTTTTTCAAGAAGA
CTGATCGACTCTTCTCCCGAGCGATGTGATCCAGCAGAAGGGCTTTTTAC
CACCAGATCAAAGCGAGAAAATAATGTTTTGTCCCTTTCGAGTATTACAC
AATCTCGCGCGAGCGGCGTTAACGCACAGCAGCAGCAATCGTCTACTTCC
ATCTCGATTCAGACGGGAGATGAAAACTCTTAGGGTGAACGGACAACCCC
TTCCCCCATGCTCTCTGTCGTACTTACGTACCAGCAACGCGAAGGCGGCT
CTGTTCATTGGTTGGCAGGAACTGCAGCACCTGTTACCCTGCTTGAGGTA
CAGTAGTCATCGCTGACTGCTGATGAGCATCCGATGAGGTACTGTTACCC
TACTTGAGGTACAATAGTCAGCGCTGACTGCTGATAAGCATCCGATTGGG
TACTACTGTCATTCGTTCTGCAAGGCAACAGGCTATACTACGTACCCTCT
CCTGCGCCACACCCTTTGGAGACTCGTGCTATAAGATGTTCCCAAGCATA
CGTACCCCCCCCCGACCCGTTCCACCAATTCCGTGGTTGTCCGTGATAAA
TCACGCCGATGGTGAGCTTACCGTACGCCCGCCAGGGTACGTGTTTTGGT
CATTTCTGCGCAGAGGCGATGGCAAGCGATTTTGCAGTAGGATCCGGCTC
ACTCTTCATGGGACTCGCCGAACACTTCATGTTTCTCTTCGCGCCAGGTG
CAAGCAATGTCTTTCTGGTCGGTGAAAGCCCGACGTGCTCCGTCCTCGAC
GTTTCAGGGATGCGAGGGTCTTTGGTCATACGACGACGGCCATACATGAC
ATGAGTACCCCCCCCCCCCTGCCCTCGCCCCCTCCCCACGGCCCCCTCTT
CATCGGTAGCTCGTAATGATATCTCCACTCCGGTGGTGACTTGACCCGCT
TGCTACGCCAGTTAGAAATACGTGTTTCCGTTGTTCCTGAGAAACGGCAA
TGGCACGCGAAATCCCCGCCCCCCCCGGCCCTCTTCTACCCCATCATCGA
ATAACCTTAACACGGCCCAAGGTGGTACACGAGAGTCACGTGAATAGCAT
CGTCTACGACCCCAAGAGCAGCCGGCTGTACAGCGGGGACGGTGTCGGGG
CCATCGTGGTGTGGCGCAGGACTAGCGGCGGCCGGGCGGGAGTGGAGGAC
TACAACGTCCTCAGAAAGGCGAGGGGGTGTAAGGATGAGTCTTTTTTGGC
TTCAACAACTCTTTCACGTCTACGAAAATTGAGCCAACTCTAATTCCAAG
TAGCTTTGTCAGGACCCACGATGGACCCGAACACCATGTATCTCCCTATG
CGTACACAATGTATCACGGTCATATGCAAGTATCGTTGTCGTGCCGTCCA
GGAAGTAGTAGTAGTGGTAGTAGTACTGTAGTCTTAGGAGTCGTAATAAT
TGCAGCAGTAGGAGTAGCAGCAGTAGCAGTAGTGGTAGTAGTAGTAGTAG
TAGTAGTGGCAGTAGTAGCAGTAGTAGTAGTGGTAGTAGTAGTAGTAGCA
GTAGCAGTAGCAGTAGTAGCAGCAGTAGCAGTAGTAGTAGCAGTAGTCGT
AGGTAGTAGTAGTAACAGGAGGAGGAGGAGGAGGAGTAGTAGCATCGCAA
TAAGCGCGCCAATTCGTCTGCACGCTTGGACGAAAAACGTTTTACTTCTA
GTCATCCGTCTGCCTGGTCGCCACAACTGCAACGCAGTGTTCACAGACGG
CTTTCTGTCACGCGCACATCGCCTACACGAGTTTTGAAGCACATGCCAAT
ATGATAATATCCACGACTGACTACTGTCAATGCTGCTGTTTGTTTCTTCT
TTTTCTCGCGTTTTGTCGATCTTGGCGGCCGAGCGCCTGACTTGAGGGGA
GCGTTGTTCTGGGCGGTTTGTGCGAGCATCTGTTCTATCAATCAAGACCT
GTCCGAGCACACGCCCAGTCTCCATGGAACTATTCCTCCAACCCCCCCGG
GTATTGTTACACAAAGCACTTCACGGGTCATAAACCGATCCGTGGGTTGG
GTCGGGAAGACTTTTAATCTCACGGGTCGGGTCAGGCCTGGTCGGGTCGG
GTCTGGTCTGGTCGGGTCGGGTCGGGTCGGGTCGGGTCGGGTCGGGAGGT
TTACAAACTCTCACGGATCGGGTCGGACCACCCTTACTCGTCCCGACCCG
ACGACCCGCGAGGTTCGACCCGACCCGTGATTATCCCTGCAAGGAAAATC
GAACAAACACTTTATTTATACAGTACTTGCAACGCTACTGCTGTGTCGGC
AACATCGTGTGCGGTGCAGGTCCAACACGCGGATCTTGTAGGGAAAGCAA
TTACGAGCCTTGCCCTAACTTCGCGCTTGCGGAGGGGCCAGCTACTCGTC
CAGGCGCACGGCAACACTCTGAGGCTGCTTGATCTGGGCACGTACCAGGT
ATCGGACACGCCTCAGATTTTTTCTGGGTCTGGGATACCAGCATTAATAG
TACCCACCCGGTCAATGAAAATGTTCTGCCCGAGAACGCATACTATTTTT
TTTTCTGTGCGGCGGATAGGTAAAACTTGGGCTTAAGCTCGCCACGCTTC
CAACCTTCCGCATATCCGGAGTGTGTCGTGTGTCGAGTTAATTCGTTGGA
GTATTTGCGATAAAAAAAAAAGAAACATTCCATAATTTATTCTTTAACTT
GAAAAAGACCAAATCCATTCTGGTATAATTAATTTTGACTGTGTTTGGGA
GGAGCGATTCGCCGAAATTCTATCCGAATCACAAAGGATACGCGTATATT
ATATCCTATCGAAAAAAGGAAAATTGACTGGCCTCACGAAGCACAGCAAT
CTTACCCTAACACCGTTTATCACTGCCAGAATTTTGCCACTCAAATTTCA
AGAAGTTTCTTCGCATGAAAAAACGTGGGTGCCGTCCTTCAAAAAGGGTT
CATGAAAAAATCGAGAAGACGCGACACCAGCAAACGTGTCCGTGCTTTAT
CCCTGCTTTTCCGCAAAACCAAGTCCTCATTTCCCGTTGACAAAAGCGAC
GAGCAAAATAATGTTCGTACCACACCCCTTTTGTGCGGTAATTCCCTCCC
TCCCTCCCTCCCTCCCGCCCGCCCGTCCGACCGCCCGATCGACCGACCGA
CCGACTGACCGACGGACCCACCGACCGTCTGACCGACGGAAATCATCGCT
TACTCCCGCATGACGAACAATTCCGTTCCATCGGTTTCGCACAACGGAAC
ACAAAACAAACACCACAATAAACAATGCAACACACAACACACACAAAGCT
GGTGAATCCTGGTTTCGCCGGCGGGGACGCGTCCGGATCGCTAGTCCGCG
CGTCTTTTAGCCCCGACGGGAGGTTTGTGGTGTCGGGCTCGGAAAAGGGC
CAGGTTCGGGTGTGGGAGGCCCAGGAAGGAAAACGCGTCAGAACTCCCTT
GCAGGTGAGCGGGGGGGTGTGCTCGATA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11825:1216..7693+

>mRNA_M-pyrifera_M_contig11825.3779.1 ID=mRNA_M-pyrifera_M_contig11825.3779.1|Name=mRNA_M-pyrifera_M_contig11825.3779.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig11825:1216..7693+ (Macrocystis pyrifera P11B4 male)
ATGCTTGTTTTTTGTTTGCTTCTCTGCAGGGGCAGCAAAGACGAGCCGCG
GCTGGTGTGCGCGCTTCAGCATGCACCGCCCTGTTTTGTCTACGCAGCCG
TGTTCCAGCCCGCAGTCCTTGACCTCACGCGGGGCACCACCGCAGATGCT
TGTTTTTTGTTTGCTTCTCTGCAGGGGCAGCAAAGACGAGCCGCGGCTGG
TGTGCGCGCTTCAGCATGCACCGCCCTGTTTTGTCTACGCAGCCGTGTTC
CAGCCCGCAGTCCTTGACCTCACGCGGGGCACCACCGCAGCAGGTCCAAA
TAATGACTCTCCAAGGTCGGAAGCAAGCGAGTGCGCGCTGGTTGTGACCG
GGGCTTACGACCGGCAACTCCGGCTGTGGGACGTGCCGATGACAGCGTCG
CATGGGGGGCGGGCGAAGATGCTCGGGACGTTGTCGAACAAGCAGGTCCA
AATAATGACTCTCCAAGGTCGGAAGCAAGCGAGTGCGCGCTGGTTGTGAC
CGGGGCTTACGACCGGCAACTCCGGCTGTGGGACGTGCCGATGACAGCGT
CGCATGGGGGGCGGGCGAAGATGCTCGGGACGTTGTCGAACAAGGTGGTA
CACGAGAGTCACGTGAATAGCATCGTCTACGACCCCAAGAGCAGCCGGCT
GTACAGCGGGGACGGTGTCGGGGCCATCGTGGTGTGGCGCAGGACTAGCG
GCGGCCGGGCGGGAGTGGAGGACTACAACGTGGTACACGAGAGTCACGTG
AATAGCATCGTCTACGACCCCAAGAGCAGCCGGCTGTACAGCGGGGACGG
TGTCGGGGCCATCGTGGTGTGGCGCAGGACTAGCGGCGGCCGGGCGGGAG
TGGAGGACTACAACGTCCAACACGCGGATCTTGTAGGGAAAGCAATTACG
AGCCTTGCCCTAACTTCGCGCTTGCGGAGGGGCCAGCTACTCGTCCAGGC
GCACGGCAACACTCTGAGGCTGCTTGATCTGGGCACGTACCAGGTCCAAC
ACGCGGATCTTGTAGGGAAAGCAATTACGAGCCTTGCCCTAACTTCGCGC
TTGCGGAGGGGCCAGCTACTCGTCCAGGCGCACGGCAACACTCTGAGGCT
GCTTGATCTGGGCACGTACCAGCTGGTGAATCCTGGTTTCGCCGGCGGGG
ACGCGTCCGGATCGCTAGTCCGCGCGTCTTTTAGCCCCGACGGGAGGTTT
GTGGTGTCGGGCTCGGAAAAGGGCCAGGTTCGGGTGTGGGAGGCCCAGGA
AGGAAAACGCGTCAGAACTCCCTTGCAGGTGAGCGGGGGGGTGTGCTCGA
TACTGGTGAATCCTGGTTTCGCCGGCGGGGACGCGTCCGGATCGCTAGTC
CGCGCGTCTTTTAGCCCCGACGGGAGGTTTGTGGTGTCGGGCTCGGAAAA
GGGCCAGGTTCGGGTGTGGGAGGCCCAGGAAGGAAAACGCGTCAGAACTC
CCTTGCAGGTGAGCGGGGGGGTGTGCTCGATA
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