mRNA_M-pyrifera_M_contig118228.3777.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A392NU12_9FABA (Importin subunit alpha-1-like (Fragment) n=2 Tax=NPAAA clade TaxID=2231382 RepID=A0A392NU12_9FABA) HSP 1 Score: 102 bits (255), Expect = 6.820e-25 Identity = 50/137 (36.50%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 22 VATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDET 432
V G++ +++ + E++++KEAAWA+SN + E ++ LVS G ++P+ LL D RI+ + LE +E ILKVG++ G Y +++++++GL IE+LQ H + +IY +A+ I+ Y EDEDET
Sbjct: 2 VIEAGLIAPIVNLLQNAEFDIKKEAAWALSNATSGGTHEQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEVEKSLGNTGDVNLYAQMIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEDEDET 138
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A392NYG6_9FABA (Importin subunit alpha-1-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NYG6_9FABA) HSP 1 Score: 102 bits (253), Expect = 1.860e-24 Identity = 53/151 (35.10%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 1 KDQMAALVATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDETAGPPEEA 453
K Q+ A++ + L++ + E++++KEAAWA+SN + E ++ LVS G ++P+ LL D RI+ + LE +E ILKVG+ + + G Y +++++++GL IE+LQ H + +IY +A+ I+ Y E+EDET P + A
Sbjct: 21 KQQIQAVIEA-NIFGPLVNLLQNAEFDIKKEAAWAISNATSGGSHEQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNIGNTGDVNLYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDETMPPGDAA 170
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A444FIK1_ENSVE (IBB domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444FIK1_ENSVE) HSP 1 Score: 103 bits (257), Expect = 3.560e-24 Identity = 49/136 (36.03%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 22 VATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDE 429
V G++ L+H + E++++KEAAWA+SN + + ++ LVS G ++P+ LL D RI+ + LE +E ILKVG+ + G G Y ++++E++GL IE+LQ H + +IY +A+ I+ + E+ED+
Sbjct: 102 VIAAGIIGPLVHLLQTAEFDIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNQGTTGGVNIYSQMIDEAEGLEKIENLQSHDNTEIYEKAVKILETFWLEEEDD 237
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A6A1VIA0_9ROSI (Importin subunit alpha-1b n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VIA0_9ROSI) HSP 1 Score: 101 bits (251), Expect = 1.270e-23 Identity = 49/144 (34.03%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 10 MAALVATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDETAGP 441
M V ++ L++ + E+++RKEAAWA+SN + E ++ LV+ G ++P+ LL D RI+ + L+ +E ILKVG+ + G+ Y +++++++GL IE+LQ H + +IY +A+ I+ Y E+ED+T P
Sbjct: 28 MLQAVIEASIIAPLVNLLQNAEFDIRKEAAWAISNATSGGSHEQIKYLVNQGCIKPLCDLLICPDPRIVTVCLDGLENILKVGEAEKNVGSAGDVNLYAQLIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDDTMPP 171
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A6A1V0F7_9ROSI (Importin subunit alpha-1b n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1V0F7_9ROSI) HSP 1 Score: 100 bits (249), Expect = 1.810e-23 Identity = 48/140 (34.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 22 VATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDETAGP 441
V ++ L++ + E+++RKEAAWA+SN + E ++ LV+ G ++P+ LL D RI+ + L+ +E ILKVG+ + G+ Y +++++++GL IE+LQ H + +IY +A+ I+ Y E+ED+T P
Sbjct: 8 VIEASIIAPLVNLLQNAEFDIRKEAAWAISNATSGGSHEQIKYLVNQGCIKPLCDLLICPDPRIVTVCLDGLENILKVGEAEKNVGSAGDVNLYAQLIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDDTMPP 147
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A835LEH7_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LEH7_9MAGN) HSP 1 Score: 99.0 bits (245), Expect = 2.060e-23 Identity = 50/143 (34.97%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 19 LVATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNY-IGEDEDETAGPP 444
+V +++ L+H + E++++KEAAWA+SN + E + LV G + P+ LL D RI+ + LE +E ILKVG+ +A G + ++++E++GL IE+LQ H + IY +A+ I+ Y + +DE+ T PP
Sbjct: 1 VVIAVDIIRPLVHLLQTAEFDIKKEAAWAISNATSGDDNEQTKYLVRQGFIRPLCDLLVCPDPRIVTVCLEGLENILKVGEAKKNASHTEGMNVFAQLIDEAEGLEKIENLQSHDNTDIYEKAVKILETYWLEDDEEATVDPP 143
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A438DX98_VITVI (Importin subunit alpha n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DX98_VITVI) HSP 1 Score: 104 bits (260), Expect = 2.440e-23 Identity = 51/137 (37.23%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 22 VATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDET 432
V G++ L+H + E++++KEAAWA+SN + E ++ LVS G ++P+ LL D RI+ + LE +E ILKVG+ G Y +++++++GL IE+LQ H + +IY +A+ I+ Y E+EDET
Sbjct: 376 VIEAGVIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHEQIKYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKTLGNSGDVNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDET 512
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A2V0PD54_9CHLO (Importin subunit alpha n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PD54_9CHLO) HSP 1 Score: 103 bits (257), Expect = 4.740e-23 Identity = 52/142 (36.62%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 22 VATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIG--EDEDETAGP 441
V G+ L++ + E++++KEAAWA+SN + E + +LV G ++P+ LL V D RI+ + LE +E ILK G++ A GT Y +++E+++GL IE LQ+H ++++Y +A+SI+ NY E ED+ P
Sbjct: 299 VLDAGIAAPLVYLLQNAEFDIKKEAAWAISNATSGGTAEQLGALVQVGCIKPLCDLLGVSDVRIVTVALEGLENILKAGEVIAKAPGGSGTNPYAQLVEDAEGLDKIEALQEHTNEELYEKAVSILENYFECEEGEDQNLAP 440
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A2R6PVV0_ACTCC (Importin subunit alpha n=3 Tax=Ericales TaxID=41945 RepID=A0A2R6PVV0_ACTCC) HSP 1 Score: 103 bits (257), Expect = 4.960e-23 Identity = 52/143 (36.36%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 4 DQMAALVATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDET 432
D +A + A G++ L+H + E++++KEAAWA+SN + + ++ LV G ++P+ LL D RI+ + LE +E ILKVG+ + G Y ++++E++GL IE+LQ H + +IY +A+ I+ Y E+EDET
Sbjct: 315 DDVAVIEA--GLISPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVGQGCIKPLCDLLICPDPRIITVCLEGLENILKVGEGEKNLGNTGDINYYAQLIDEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDET 455
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Match: A0A6G1E8A9_9ORYZ (Importin subunit alpha n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1E8A9_9ORYZ) HSP 1 Score: 103 bits (256), Expect = 8.580e-23 Identity = 49/143 (34.27%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 1 KDQMAALVATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSAGALEPMSRLLTVDDARILHIMLESIEAILKVGKLNDDAGAYPGTEDYIRILEESDGLTCIEDLQDHKDQKIYRRALSIIRNYIGEDEDE 429
K+Q+ A++ ++ LLH + +++V+KEAAWA+SN + P+ + LVS G ++P+ LL D++I+ I L+ ++ IL VG+ + GA +++++++++GL IEDLQ+H + +IY +A+S++ +Y ED+D+
Sbjct: 361 KEQIQAVI-NANIISPLLHLLQNADFDVKKEAAWAISNATSGGTPDQIEYLVSQGCIKPLCDLLNHKDSKIVSICLDGLDNILSVGEAKKNLGAC-NINMFVQMIDDAEGLEKIEDLQNHDNVEIYEKAVSVLESYCVEDDDQ 501 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118228.3777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118228.3777.1 >prot_M-pyrifera_M_contig118228.3777.1 ID=prot_M-pyrifera_M_contig118228.3777.1|Name=mRNA_M-pyrifera_M_contig118228.3777.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp MAALVATPGMLQALLHQMSEGEWNVRKEAAWAVSNLATQARPEDVRSLVSback to top mRNA from alignment at M-pyrifera_M_contig118228:1..453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118228.3777.1 ID=mRNA_M-pyrifera_M_contig118228.3777.1|Name=mRNA_M-pyrifera_M_contig118228.3777.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig118228:1..453+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118228:1..453+ >mRNA_M-pyrifera_M_contig118228.3777.1 ID=mRNA_M-pyrifera_M_contig118228.3777.1|Name=mRNA_M-pyrifera_M_contig118228.3777.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig118228:1..453+ (Macrocystis pyrifera P11B4 male)back to top |