mRNA_M-pyrifera_M_contig118032.3748.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: UPI001C3CF245 (hypothetical protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3CF245) HSP 1 Score: 173 bits (439), Expect = 5.430e-48 Identity = 96/183 (52.46%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 1 TLQSPPAAPEPPLPTAFDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDDLPGVDGKVQEQAFSARSDGQMVGMRNVYVVVPGDGNGATRPAILVVAPRDTPAGVRSGASATGLLIALARQWATTTQEHPILFVSTDGSTAGNAGVRWFLSRFSELKIGAAVVLDDPGARQGTGVSI 549
TL++P PEP LP+ DG+ AL+ L IAPER PG+ AA WV++QL +PG G+VQ Q ARS + V ++NVY+VVPG G G R I+VVAPRDTP+GV +G S+T +L+ +A+ ATT + P LFVS DGST GNAG+RWFLSRFS + AA+VLD PG G V I
Sbjct: 24 TLETPDRGPEPALPSTIDGQLALDLNGQLAGIAPERPPGSAPDLAAARWVQDQLSQVPGGAGRVQTQDLEARSGRETVRLQNVYLVVPGRGTGRARAGIVVVAPRDTPSGVSAGTSSTAVLLRMAQVSATTRHQRPHLFVSVDGSTVGNAGMRWFLSRFSAFPLSAAIVLDAPGETTGDRVHI 206
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: UPI001C3C5815 (hypothetical protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3C5815) HSP 1 Score: 96.3 bits (238), Expect = 6.780e-22 Identity = 78/150 (52.00%), Postives = 82/150 (54.67%), Query Frame = -2
Query: 3 PAFPAVEPSVETNRIGCSWVVVAHCRASAIRSPVADAPERTPAGVSRGATTRIAGRVAPFPSPGTTT*TLRIPTICPSERALKACSWTFPSTPGRSSSCSRTQSAARSPPWVPGARSGAMAPSVAASSSAARPSKAVGSGGSGAAGGDCR 452
PA P+VEPSVETNR G W VVA RAS + VA AP TPAGVSRGATT P PGTT TLR T PS RA +CS T PG SC RT +AA PG RSGA S ASS PS GS GSG G R
Sbjct: 2 PALPSVEPSVETNRWGRWWRVVADARASRSSTAVALAPASTPAGVSRGATTSTPPPDTSPPVPGTTRYTLRSRTGPPSARASSSCSCTRRCAPGIWDSCWRTHAAAARSGGEPGGRSGATPESWLASSRVPWPSIVDGSAGSGPGSGASR 151
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A537ZWA1_9ACTN (M28 family peptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZWA1_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 3.130e-12 Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 1
Query: 22 APEPPLPTA-----FDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDDLPGVDGKVQEQAFSARSDGQMVGMRNVYVVVPGDGNGATRPAILVVAPRDTPAG--VRSGASATGLLIALARQWATTTQEHPILFVSTDGSTAGNAGVRWFLSRFSEL-KIGAAVVLDDPGA 525
AP PLP FD AA + AP+R PG++G A V + + G G + EQ FS + DG V +RNV + +PGD T +++V+APRD+ G T L+ L + + + ++FVSTDGS+AG G R F + + +L + A + L PG+
Sbjct: 27 APPDPLPAVAAPAEFDELAAARFDRQITDAAPDRTPGSEGDAAIAQMVEQHFRQVEG--GLISEQRFSGQFDGHDVDLRNVILTLPGD----TDRSVVVMAPRDSGGGPGXXXXXXXTAALLELVDELSAQSHTKTLVFVSTDGSSAGVLGAREFATAYPDLASVDALIDLWQPGS 196
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A538A1T5_9ACTN (M28 family peptidase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538A1T5_9ACTN) HSP 1 Score: 73.6 bits (179), Expect = 5.110e-12 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 49 FDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDDLPGVDGKVQEQAFSARSDGQMVGMRNVYVVVPGDGNGATRPAILVVAPRDTPAG--VRSGASATGLLIALARQWATTTQEHPILFVSTDGSTAGNAGVRWFLSRFSELK-IGAAVVLDDPGA 525
FD AA + + AP R PG+ G AD V ++ + +G+V +Q F+ +G V +RN+ + +PG+ + +++V+A RD+ +G S A+AT L+ L T ++FVSTDG +AG AG R F RF++ I AVVL PG+
Sbjct: 44 FDQDAAAKIDRQIVGAAPVRPPGSDGDLAIADMVEKRF--MRVSEGQVAQQRFAGSFEGNDVQLRNLILTLPGE----SPRSVVVLAARDSASGPGAASSAAATATLLELVDSLRTARHTKTLVFVSTDGGSAGAAGAREFAERFAQRDLIDGAVVLWQPGS 199
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A2V2SG92_9BACT (Peptidase_M28 domain-containing protein (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V2SG92_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.620e-8 Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 1
Query: 31 PPLPTAFDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDDLPGVDGKVQEQAFSARSDGQMVGMRNVYVVVPGDGNGATRPAILVVAPRDTPAGV-RSGASATGLLIALARQWATTTQEHPILFVSTDGSTAGNAGVRWFLSRFSEL-KIGAAVVLDDPGA 525
P P AF G A D A L P+R PG+ + V ++ L G + ++ F + DG V M NV ++ N + I+V+APRD S AS+T +L+ +A ++++ +FVS DGS AGNAG R F + + K+ A +V+DD GA
Sbjct: 35 PIAPDAFQGDLAYGDTARLLKQYPDRLPGSASDQALGAAVAQRFRAL-GFE--TRQDRFDGQYDGNGVSMSNVEGLL----NAPSDRQIVVMAPRDAAGSPGASSASSTAVLLQMAEALDGSSRKKTFVFVSLDGSAAGNAGARHFAETYPDRSKVDAILVVDDIGA 194
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A0F8YZ80_9ZZZZ (Peptidase_M28 domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8YZ80_9ZZZZ) HSP 1 Score: 60.8 bits (146), Expect = 1.140e-7 Identity = 68/180 (37.78%), Postives = 87/180 (48.33%), Query Frame = 1
Query: 1 TLQSPPAAPEPPL-PTAFDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDDLPGVDGKVQEQAFSARSDGQMVGMRNVYVVVPGDGNGATRPAILVVAPRDTPAGVRSGA---SATGLLIALARQWATTTQEHPILFVSTDGSTAGNAGVRWFLSRFSEL-KIGAAVVLDDPGA 525
+L PAA P L P AF + A A L P+R PG+ E AA+ VR + + L G + F A G+ V M NV G G + ++++A RD AG GA S TG+L+ A +FVSTDG TA AG R F R+ E KI AA+VLDD GA
Sbjct: 18 SLDEHPAALVPALAPEAFSEQGADTTARELIDRFPDRRPGSDDDEAAAELVRGRFESL-GFE--TSRDRFEAPVKGEDVTMTNVQ----GTLRGPSDRQVVLLAHRD--AGRSPGAASASGTGVLLEFAAALEGLRHRKTFVFVSTDGGTADAAGARRFAQRYPEKEKIDAALVLDDIGA 188
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A7W1JZE7_9ACTN (M28 family peptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1JZE7_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 4.750e-7 Identity = 60/156 (38.46%), Postives = 73/156 (46.79%), Query Frame = 1
Query: 46 AFDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDD--LPGVDGKVQEQAFSARSDGQ-MVGMRNVYVVVPGDGNGATRPAILVVAPRD---TPAGVRSGASATGLLIALARQW-----ATTTQ---EHPILFVSTDGSTAGNAGVRWFLS 471
AFDG A A L R PG G W R QL LP ++ + FSA G+ V M+N+ V V G G I+V+A RD T G AS T +LI LAR + A+T + H ILFVSTDG +AG G WF S
Sbjct: 58 AFDGEATKRLAQNLVVEQSSRRPGASG---PVQWFRSQLQPYGLP-----IRSERFSAVIPGRGKVEMQNLVVDVVGRSPGT----IVVMAHRDNDGTGQGANDNASGTAMLIQLARAYGAPAGASTGRLQPNHTILFVSTDGGSAGGLGAAWFAS 201
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A538D870_9ACTN (M28 family peptidase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D870_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 4.750e-7 Identity = 59/179 (32.96%), Postives = 82/179 (45.81%), Query Frame = 1
Query: 31 PPLPTAFDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDDLPGVDGKVQEQAFSARSDGQ-MVGMRNVYVVVPGDGNGATRPAILVVAPRDTPA---GVRSGASATGLLIALARQWATTTQ-------EHPILFVSTDGSTAGNAGVRWFLSRFSELKIGAAVVLDDPGARQG 534
P L FDG A A P+RAPG+ G RAA+WV ++LD G++ + + F A+ G+ V + NV V G N I+VVA RD G S T L+ L+R +AT H ILF+S+D + G G +F++ + AVV D A G
Sbjct: 54 PTLQPDFDGATAKLTAEQFANNNPDRAPGSPGARRAANWVAQRLDQY-GLE--LGHERFHAKIPGRGNVELENVLAVRQGRSNEL----IVVVAHRDNTGAGPGANDNGSGTAALLELSRSYATPQAPPRPPQPNHTILFLSSDAGSFGGFGADYFITHYRYRDRVVAVVDLDSIAGNG 225
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Match: A0A177RAA2_9ACTN (Peptidase_M28 domain-containing protein n=1 Tax=Gaiella sp. SCGC AG-212-M14 TaxID=1799656 RepID=A0A177RAA2_9ACTN) HSP 1 Score: 56.6 bits (135), Expect = 3.990e-6 Identity = 55/156 (35.26%), Postives = 68/156 (43.59%), Query Frame = 1
Query: 46 AFDGRAALEDAATLGAIAPERAPGTQGGERAADWVREQLDD--LPGVDGKVQEQAFSARSDGQ-MVGMRNVYVVVPGDGNGATRPAILVVAPRDTPA---GVRSGASATGLLIALARQWATTT--------QEHPILFVSTDGSTAGNAGVRWFLS 471
AFDG A + A L R PG G W R QL LP ++ + FSA G+ V M+N+ V G G I+V+A RD G AS T +L+ LAR + H ILFVSTDG +AG G WF S
Sbjct: 58 AFDGEATRQLAQNLVEEQSSRPPGASG---PVQWFRSQLQPYGLP-----IRTERFSAVIPGRGKVEMQNLVAEVVGRSPGT----IVVMAHRDNDGSGQGANDNASGTAMLVQLARAYGAPAGASSGRLRPNHTILFVSTDGGSAGGLGAAWFAS 201 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118032.3748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig118032.3748.1 >prot_M-pyrifera_M_contig118032.3748.1 ID=prot_M-pyrifera_M_contig118032.3748.1|Name=mRNA_M-pyrifera_M_contig118032.3748.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp TLQSPPAAPEPPLPTAFDGRAALEDAATLGAIAPERAPGTQGGERAADWVback to top mRNA from alignment at M-pyrifera_M_contig118032:3..551- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig118032.3748.1 ID=mRNA_M-pyrifera_M_contig118032.3748.1|Name=mRNA_M-pyrifera_M_contig118032.3748.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig118032:3..551- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig118032:3..551- >mRNA_M-pyrifera_M_contig118032.3748.1 ID=mRNA_M-pyrifera_M_contig118032.3748.1|Name=mRNA_M-pyrifera_M_contig118032.3748.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig118032:3..551- (Macrocystis pyrifera P11B4 male)back to top |